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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001 1hq5:A (2.3) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 11258879 MOAD: Kd=2.22uM
    PDBbind: -logKd/Ki=5.65, Kd=2.22uM
    1002 1hqf:A (2.9) BS03 HAR 3.5.3.1 GO:0000050 ... P07824 11258880 PDBbind: -logKd/Ki=5.00, Ki=10uM
    1003 1hqg:A (2.0) BS03 ORN 3.5.3.1 GO:0000050 ... P07824 11258880 PDBbind: -logKd/Ki=3.00, Ki=1.0mM
    1004 1hqh:A (2.8) BS03 NNH 3.5.3.1 GO:0000050 ... P07824 11258880 PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    BindingDB: IC50=2000nM
    1005 1hrn:A (1.8) BS01 03D 3.4.23.15 GO:0004190 ... P00797 7608971 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    1006 1hs6:A (1.95) BS02 BES 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 11175901 PDBbind: -logKd/Ki=5.38, IC50=4.2uM
    BindingDB: IC50=4000nM, Kd=2050nM, Ki=320nM
    1007 1hsg:A (2.0) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 7929352 PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    1008 1hsg:B (2.0) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 7929352 MOAD: Ki=0.38nM
    PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    1009 1hsh:A (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7929352 MOAD: Ki=2.45nM
    PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    1010 1hsh:B (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7929352 PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    1011 1hsl:A (1.89) BS01 HIS ? GO:0006865 ... P0AEU0 8161536 MOAD: Kd=0.064uM
    PDBbind: -logKd/Ki=7.19, Kd=0.064uM
    1012 1hte:A (2.8) BS01 G23 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 PDBbind: -logKd/Ki=5.64, IC50=2265nM
    1013 1hte:B (2.8) BS02 G23 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 PDBbind: -logKd/Ki=5.64, IC50=2265nM
    1014 1htf:A (2.2) BS01 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    1015 1htf:A (2.2) BS02 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    1016 1htf:B (2.2) BS01 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    1017 1htf:B (2.2) BS02 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    1018 1htg:A (2.0) BS01 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=3.8nM
    PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    1019 1htg:A (2.0) BS02 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=3.8nM
    PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    1020 1htg:B (2.0) BS01 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    1021 1htg:B (2.0) BS02 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    1022 1hti:B (2.8) BS01 PGA 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P60174 8061610 PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    1023 1hv5:A (2.6) BS04 RXP 3.4.24.- GO:0004222 ... Q02853 11254383 PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=5nM
    1024 1hvh:A (1.8) BS01 Q82 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9554878 PDBbind: -logKd/Ki=7.96, Ki=11nM
    1025 1hvh:B (1.8) BS01 Q82 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9554878 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    1026 1hvi:A (1.8) BS01 A77 ? GO:0004190 ... O92139 N/A MOAD: Ki=84pM
    PDBbind: -logKd/Ki=10.92, Ki=12pM
    1027 1hvi:B (1.8) BS01 A77 ? GO:0004190 ... O92139 N/A PDBbind: -logKd/Ki=10.92, Ki=12pM
    1028 1hvj:A (2.0) BS01 A78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 N/A MOAD: Ki=4pM
    PDBbind: -logKd/Ki=11.40, Ki=4pM
    1029 1hvj:B (2.0) BS01 A78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 N/A PDBbind: -logKd/Ki=11.40, Ki=4pM
    1030 1hvk:A (1.8) BS01 A79 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 N/A MOAD: Ki=77pM
    PDBbind: -logKd/Ki=10.96, Ki=11pM
    1031 1hvk:B (1.8) BS01 A79 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 N/A PDBbind: -logKd/Ki=10.96, Ki=11pM
    1032 1hvl:A (1.8) BS01 A76 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 N/A PDBbind: -logKd/Ki=9.95, Ki=112pM
    1033 1hvl:B (1.8) BS01 A76 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 N/A MOAD: Ki=1000pM
    PDBbind: -logKd/Ki=9.95, Ki=112pM
    1034 1hvr:A (1.8) BS01 XK2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8278812 MOAD: Ki=0.31nM
    PDBbind: -logKd/Ki=9.51, Ki=0.31nM
    1035 1hvr:B (1.8) BS01 XK2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8278812 PDBbind: -logKd/Ki=9.51, Ki=0.31nM
    1036 1hvs:A (2.25) BS01 A77 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 7773792 MOAD: Ki=50pM
    PDBbind: -logKd/Ki=10.30, Ki=50pM
    1037 1hvs:B (2.25) BS01 A77 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 7773792 PDBbind: -logKd/Ki=10.30, Ki=50pM
    1038 1hvy:A (1.9) BS01 D16 2.1.1.45 GO:0000900 ... P04818 11329255 PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    BindingDB: IC50=29000nM
    1039 1hvy:B (1.9) BS02 D16 2.1.1.45 GO:0000900 ... P04818 11329255 PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    BindingDB: IC50=29000nM
    1040 1hwr:A (1.8) BS01 216 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9575185 PDBbind: -logKd/Ki=8.33, Ki=4.70nM
    1041 1hwr:B (1.8) BS01 216 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9575185 MOAD: Ki=4.7nM
    PDBbind: -logKd/Ki=8.33, Ki=4.70nM
    1042 1hww:A (1.87) BS02 SWA 3.2.1.114 GO:0000139 ... Q24451 11406577 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=37nM, Ki=3.0nM
    1043 1hxb:A (2.3) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 1956054 MOAD: Ki=0.12nM
    PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    1044 1hxb:B (2.3) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 1956054 PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    1045 1hxk:A (1.5) BS02 DMJ 3.2.1.114 GO:0000139 ... Q24451 11406577 MOAD: ic50=400uM
    PDBbind: -logKd/Ki=3.40, IC50=400uM
    1046 1hxw:A (1.8) BS01 RIT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 7708670 PDBbind: -logKd/Ki=10.82, Ki=15pM
    1047 1hxw:B (1.8) BS01 RIT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 7708670 MOAD: Ki=15pM
    PDBbind: -logKd/Ki=10.82, Ki=15pM
    1048 1hy7:B (1.5) BS06 MBS 3.4.24.17 GO:0004222 ... P08254 11297453 MOAD: ic50=4090nM
    PDBbind: -logKd/Ki=5.39, IC50=4.09uM
    BindingDB: IC50=4090nM
    1049 1hyv:A (1.7) BS01 TTA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 11264582 MOAD: ic50>5mM
    PDBbind: -logKd/Ki=2.30, IC50>5mM
    1050 1i00:A (2.5) BS02 D16 2.1.1.45 GO:0000900 ... P04818 11316879 MOAD: Ki=0.46uM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    BindingDB: IC50=29000nM
    1051 1i00:B (2.5) BS03 D16 2.1.1.45 GO:0000900 ... P04818 11316879 MOAD: Ki=0.46uM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    BindingDB: IC50=29000nM
    1052 1i1e:A (2.5) BS01 DM2 3.4.24.69 GO:0004222 ... P10844 11679763 MOAD: Kd=9.4uM
    PDBbind: -logKd/Ki=5.03, Kd=9.4uM
    1053 1i32:A (2.6) BS01 NMD 1.2.1.12 GO:0004365 ... Q27890 11371162 PDBbind: -logKd/Ki=5.70, IC50=2uM
    1054 1i32:B (2.6) BS01 NMD 1.2.1.12 GO:0004365 ... Q27890 11371162 PDBbind: -logKd/Ki=5.70, IC50=2uM
    1055 1i33:A (3.0) BS01 TND 1.2.1.12 GO:0004365 ... Q27890 11371162 PDBbind: -logKd/Ki=4.12, IC50=75uM
    1056 1i33:B (3.0) BS01 TND 1.2.1.12 GO:0004365 ... Q27890 11371162 PDBbind: -logKd/Ki=4.12, IC50=75uM
    1057 1i33:B (3.0) BS02 TND 1.2.1.12 GO:0004365 ... Q27890 11371162 PDBbind: -logKd/Ki=4.12, IC50=75uM
    1058 1i37:A (2.0) BS01 DHT ? N/A P15207 11320241 PDBbind: -logKd/Ki=9.57, Ki=0.27nM
    BindingDB: IC50=3.1nM, EC50=0.97nM, Ki=0.43nM
    1059 1i41:A (3.2) BS01 HEN 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=4.57, Ki=27uM
    1060 1i41:A (3.2) BS02 HEN 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=4.57, Ki=27uM
    1061 1i41:C (3.2) BS01 HEN 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=4.57, Ki=27uM
    1062 1i41:C (3.2) BS02 HEN 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=4.57, Ki=27uM
    1063 1i43:A (3.1) BS02 PMC 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=3.70, Ki=200uM
    1064 1i43:A (3.1) BS04 PMC 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=3.70, Ki=200uM
    1065 1i43:C (3.1) BS02 PMC 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=3.70, Ki=200uM
    1066 1i43:C (3.1) BS04 PMC 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=3.70, Ki=200uM
    1067 1i48:A (3.25) BS02 CCO 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=5.70, Ki=2.0uM
    1068 1i48:C (3.25) BS03 CCO 4.2.99.9 GO:0003962 ... Q9ZPL5 11518531 PDBbind: -logKd/Ki=5.70, Ki=2.0uM
    1069 1i5d:A (2.9) BS01 128 2.7.13.3 GO:0016310 ... Q56310 11276258 PDBbind: -logKd/Ki=8.00, Kd<0.010uM
    1070 1i5r:A (1.6) BS01 HYC 1.1.1.51
    1.1.1.62    		 GO:0003824 ... P14061 12223444 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    BindingDB: IC50=52nM, Ki=3nM
    1071 1i6v:C (3.3) BS01 RFP 2.7.7.6 GO:0000428 ... Q9KWU7 11290327 PDBbind: -logKd/Ki=5.00, Ki=10uM
    1072 1i72:A (2.0) BS01 MAO 4.1.1.50 GO:0004014 ... P17707 11583147 PDBbind: -logKd/Ki=7.26, IC50=55nM
    BindingDB: IC50=55nM
    1073 1i72:B (2.0) BS01 MAO 4.1.1.50 GO:0004014 ... P17707 11583147 PDBbind: -logKd/Ki=7.26, IC50=55nM
    BindingDB: IC50=55nM
    1074 1i7c:A (2.4) BS02 MGB 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    1075 1i7c:B (2.4) BS01 MGB 4.1.1.50 GO:0004014 ... P17707 11583147 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    1076 1i7g:A (2.2) BS01 AZ2 ? GO:0003677 ... Q07869 11587644 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: EC50=820nM, Ki=1000nM
    1077 1i7i:A (2.35) BS01 AZ2 ? GO:0003677 ... P37231 11587644 PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    BindingDB: EC50=704nM, Ki=18nM
    1078 1i7m:A (2.24) BS02 CG 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.23nM
    PDBbind: -logKd/Ki=9.64, IC50=0.23nM
    1079 1i7m:B (2.24) BS01 CG 4.1.1.50 GO:0004014 ... P17707 11583147 PDBbind: -logKd/Ki=9.64, IC50=0.23nM
    1080 1i7z:A (2.3) BS01 COC ? GO:0002250 ... P01834 11469854 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    1081 1i7z:B (2.3) BS01 COC ? N/A P01857 11469854 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    1082 1i80:B (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    1083 1i80:C (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    1084 1i8j:A (1.9) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11444968 PDBbind: -logKd/Ki=4.41, IC50=39uM
    1085 1i8m:A (2.1) BS01 dna ? N/A Q7TS98 11733999 PDBbind: Kd=2700nM
    1086 1i8m:B (2.1) BS01 dna ? N/A Q924Q6 11733999 PDBbind: Kd=2700nM
    1087 1i8m:B (2.1) BS02 dna ? N/A Q924Q6 11733999 PDBbind: Kd=2700nM
    1088 1i8m:H (2.1) BS01 dna ? N/A Q924Q6 11733999 PDBbind: Kd=2700nM
    1089 1i8m:L (2.1) BS01 dna ? N/A Q7TS98 11733999 PDBbind: Kd=2700nM
    1090 1i8z:A (1.93) BS02 INL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.27nM
    PDBbind: -logKd/Ki=8.90, IC50=1.27nM
    BindingDB: Ki=0.15nM, IC50=1.3nM
    1091 1i90:A (2.0) BS02 INM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.28nM
    PDBbind: -logKd/Ki=8.89, IC50=1.28nM
    1092 1i91:A (2.0) BS02 INQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.15nM
    PDBbind: -logKd/Ki=8.94, IC50=1.15nM
    BindingDB: Ki=0.15nM, IC50=1.2nM
    1093 1i9l:A (1.93) BS02 INV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    1094 1i9l:A (1.93) BS03 INV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    1095 1i9m:A (1.84) BS02 INW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    1096 1i9m:A (1.84) BS03 INW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    1097 1i9n:A (1.86) BS02 IOA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=2.2nM
    PDBbind: -logKd/Ki=8.66, Kd=2.2nM
    1098 1i9o:A (1.86) BS02 IOC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.8nM
    PDBbind: -logKd/Ki=8.42, Kd=3.8nM
    BindingDB: Kd=2.3nM
    1099 1i9o:A (1.86) BS03 IOC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.8nM
    PDBbind: -logKd/Ki=8.42, Kd=3.8nM
    BindingDB: Kd=2.3nM
    1100 1i9p:A (1.92) BS02 IOE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    1101 1ibg:H (2.7) BS01 OBN N/A N/A N/A 7739045 PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    1102 1ibg:L (2.7) BS01 OBN N/A N/A N/A 7739045 PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    1103 1ida:A (1.7) BS01 0PO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 PDBbind: -logKd/Ki=8.70, IC50<=2.0nM
    1104 1ida:B (1.7) BS01 0PO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 MOAD: ic50<2nM
    PDBbind: -logKd/Ki=8.70, IC50<=2.0nM
    1105 1idb:A (2.2) BS01 0DO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 PDBbind: -logKd/Ki=7.96, IC50=11nM
    1106 1idb:B (2.2) BS01 0DO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    1107 1ie9:A (1.4) BS01 VDX ? GO:0003677 ... P11473 11344298 PDBbind: -logKd/Ki=10.19, Kd=0.065nM
    BindingDB: EC50=10nM, IC50=1.1nM, Kd=0.065nM
    1108 1iem:A (2.3) BS01 CB4 3.5.2.6 GO:0008800 ... P00811 11478888 PDBbind: -logKd/Ki=7.70, Ki=20nM
    1109 1iep:A (2.1) BS01 STI 2.7.10.2 GO:0004672 ... P00520 12154025 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    BindingDB: IC50=10.8nM
    1110 1iew:A (2.55) BS01 G2F 3.2.1.21 GO:0004553 ... Q9XEI3 11709165 PDBbind: -logKd/Ki=4.59, Ki=25.50uM
    1111 1if7:A (1.98) BS02 SBR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11818565 MOAD: Kd=30pM
    PDBbind: -logKd/Ki=10.52, Kd=30pM
    1112 1if8:A (1.94) BS02 SBS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11818565 MOAD: Kd=230pM
    PDBbind: -logKd/Ki=9.64, Kd=230pM
    1113 1igb:A (2.3) BS03 IPO 3.4.11.10 GO:0006508 ... Q01693 8647077 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    1114 1igj:D (2.5) BS01 DGX N/A N/A N/A 8234291 MOAD: Kd=0.1nM
    PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    1115 1ign:A (2.25) BS01 dna ? GO:0000723 ... P11938 8620531 PDBbind: Kd=13pM
    1116 1ign:A (2.25) BS02 dna ? GO:0000723 ... P11938 8620531 PDBbind: Kd=13pM
    1117 1ign:B (2.25) BS01 dna ? GO:0000723 ... P11938 8620531 PDBbind: Kd=13pM
    1118 1ign:B (2.25) BS02 dna ? GO:0000723 ... P11938 8620531 PDBbind: Kd=13pM
    1119 1ih0:A (-1.00) BS03 EMD ? GO:0005509 ... P63316 11320096 PDBbind: -logKd/Ki=5.00, Kd=10uM
    1120 1ihy:A (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140 PDBbind: -logKd/Ki=3.74, Ki=0.18mM
    1121 1ihy:C (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140 PDBbind: -logKd/Ki=3.74, Ki=0.18mM
    1122 1ii5:A (1.6) BS01 GLU ? GO:0015276 ... P73797 11518533 MOAD: Kd=240nM
    PDBbind: -logKd/Ki=6.62, Kd=240nM
    1123 1iig:B (2.6) BS01 3PP 5.3.1.1 GO:0004807 ... P04789 2062828 PDBbind: -logKd/Ki=1.57, Ki=27mM
    1124 1iiq:A (1.83) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 11906284 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    1125 1iiq:B (1.83) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 11906284 PDBbind: -logKd/Ki=7.48, Ki=33nM
    1126 1ijr:A (2.2) BS01 CC0 2.7.10.2 N/A P06239 11527723 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    1127 1ijw:C (2.4) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=3.8nM
    1128 1ijw:C (2.4) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=3.8nM
    1129 1ik4:A (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39nM
    1130 1ik4:F (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39nM
    1131 1ikt:A (1.75) BS01 OXN 1.1.1.n12
    4.2.1.107
    4.2.1.119    		 N/A P51659 11700068 PDBbind: -logKd/Ki=3.40, Kd=400uM
    1132 1ikv:A (3.0) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 11895437 PDBbind: -logKd/Ki=6.28, IC50=520nM
    1133 1ikw:A (3.0) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 11895437 PDBbind: -logKd/Ki=8.60, IC50=2.5nM
    1134 1ikx:A (2.8) BS01 PNU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 11895437 PDBbind: -logKd/Ki=8.15, IC50=7.0nM
    1135 1iky:A (3.0) BS01 MSD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 11895437 PDBbind: -logKd/Ki=8.26, IC50=5.5nM
    1136 1il2:A (2.6) BS01 rna 6.1.1.12 GO:0000166 ... P21889 11566892 PDBbind: Kd=3uM
    1137 1il2:B (2.6) BS01 rna 6.1.1.12 GO:0000166 ... P21889 11566892 PDBbind: Kd=3uM
    1138 1il3:A (2.8) BS01 7DG 3.2.2.22 GO:0017148 ... P02879 11754581 PDBbind: -logKd/Ki=2.55, IC50=2.8mM
    1139 1il4:A (2.6) BS01 9DG 3.2.2.22 GO:0017148 ... P02879 11754581 PDBbind: -logKd/Ki=2.85, IC50=1.4mM
    BindingDB: IC50=1400000nM
    1140 1il5:A (2.8) BS01 DDP 3.2.2.22 GO:0017148 ... P02879 11754581 PDBbind: -logKd/Ki=2.66, IC50=2.2mM
    1141 1il9:A (3.1) BS01 MOG 3.2.2.22 GO:0017148 ... P02879 11754581 PDBbind: -logKd/Ki=3.40, IC50=0.40mM
    BindingDB: IC50=400000nM
    1142 1ilh:A (2.76) BS01 SRL ? GO:0003677 ... O75469 11408620 PDBbind: -logKd/Ki=7.39, Kd=41nM
    BindingDB: EC50=440nM
    1143 1imh:C (2.86) BS01 dna ? GO:0000978 ... O94916 11780147 PDBbind: Kd=30nM
    1144 1imh:C (2.86) BS02 dna ? GO:0000978 ... O94916 11780147 PDBbind: Kd=30nM
    1145 1imh:D (2.86) BS01 dna ? GO:0000978 ... O94916 11780147 PDBbind: Kd=30nM
    1146 1imx:A (1.82) BS01 CPQ ? GO:0005179 ... P05019 11551198 PDBbind: -logKd/Ki=3.52, Kd=300uM
    1147 1inc:A (1.94) BS02 ICL 3.4.21.36 GO:0004252 ... P00772 3430613 PDBbind: -logKd/Ki=9.34, Ki=0.46nM
    1148 1ind:H (2.2) BS01 EOT N/A N/A N/A 8218161 MOAD: Ka=11000000000M^-1
    PDBbind: -logKd/Ki=10.05, Kd=0.09nM
    1149 1ind:L (2.2) BS01 EOT N/A N/A N/A 8218161 PDBbind: -logKd/Ki=10.05, Kd=0.09nM
    1150 1inf:A (2.4) BS02 ST4 3.2.1.18 GO:0004308 ... P03474 7650674 MOAD: ic50=10uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    1151 1ing:A (2.4) BS02 ST5 3.2.1.18 GO:0004308 ... P06820 7650674 PDBbind: -logKd/Ki=2.00, IC50>10mM
    1152 1inh:A (2.4) BS03 ST6 3.2.1.18 GO:0004308 ... P06820 7650674 PDBbind: -logKd/Ki=2.30, IC50=5mM
    1153 1io4:A (3.0) BS01 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1154 1io4:A (3.0) BS02 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1155 1io4:B (3.0) BS01 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1156 1io4:B (3.0) BS02 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1157 1io4:C (3.0) BS01 dna ? GO:0003677 ... Q03347 11257229 PDBbind: Kd=7.56nM
    1158 1io4:C (3.0) BS02 dna ? GO:0003677 ... Q03347 11257229 PDBbind: Kd=7.56nM
    1159 1it6:A (2.0) BS03 CYU 3.1.3.16 GO:0000070 ... P36873 12015153 MOAD: Ki=4.1nM
    PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    1160 1iup:A (1.6) BS01 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1161 1iup:A (1.6) BS02 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1162 1iup:A (1.6) BS03 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1163 1ivp:A (2.5) BS01 1ZK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 8514751 PDBbind: -logKd/Ki=7.52, Ki=30nM
    1164 1ivp:B (2.5) BS01 1ZK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 8514751 MOAD: Ki=30nM
    PDBbind: -logKd/Ki=7.52, Ki=30nM
    1165 1iy7:A (2.0) BS02 CXA 3.4.17.1 GO:0004181 ... P00730 12431056 MOAD: Ki=0.64uM
    PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    1166 1iyl:A (3.2) BS01 R64 2.3.1.97 GO:0004379 ... P30418 12401496 PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    1167 1izh:A (1.9) BS01 Q50 3.4.23.16 GO:0004190 ... Q90EB9 12460574 PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    1168 1izh:B (1.9) BS01 Q50 3.4.23.16 GO:0004190 ... Q90EB9 12460574 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    1169 1izi:A (2.15) BS01 Q50 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12460574 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    1170 1izi:B (2.15) BS01 Q50 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12460574 MOAD: Ki=0.26nM
    PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    1171 1j01:A (2.0) BS01 XIL 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 N/A MOAD: Ki=0.34uM
    PDBbind: -logKd/Ki=6.47, Ki=0.34uM
    1172 1j07:A (2.35) BS02 DCU 3.1.1.7 GO:0001919 ... P21836 12505979 MOAD: Ki=0.021uM
    PDBbind: -logKd/Ki=7.68, Ki=0.021uM
    1173 1j14:A (2.4) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=32.2uM
    PDBbind: -logKd/Ki=4.49, Ki=32.2uM
    1174 1j15:A (2.0) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1175 1j16:A (1.6) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1176 1j16:A (1.6) BS03 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1177 1j17:T (2.0) BS02 ZEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=6.05uM
    PDBbind: -logKd/Ki=5.22, Ki=6.05uM
    1178 1j1a:A (2.2) BS03 BHP 3.1.1.4 GO:0004623 ... P14555 12616631 MOAD: ic50=0.029uM
    PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    1179 1j1a:B (2.2) BS03 BHP 3.1.1.4 GO:0004623 ... P14555 12616631 MOAD: ic50=0.029uM
    PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    1180 1j36:A (2.4) BS02 LPR 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    1181 1j37:A (2.4) BS02 X8Z 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    1182 1j4r:A (1.8) BS01 001 5.2.1.8 GO:0000413 ... P62942 11735566 MOAD: Ki=0.019uM
    PDBbind: -logKd/Ki=7.72, Ki=0.019uM
    1183 1j5a:K (3.5) BS01 rna ? GO:0003735 ... Q9RXK1 11677599 PDBbind: Kd=10nM
    1184 1j5a:L (3.5) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599 PDBbind: Kd=10nM
    1185 1j5a:M (3.5) BS01 rna ? GO:0003735 ... P49228 11677599 PDBbind: Kd=10nM
    1186 1j5i:A (-1.00) BS01 NCZ ? GO:0003677 ... P0A3R9 12269815 PDBbind: -logKd/Ki=3.64, Kd=230uM
    1187 1j5k:A (-1.00) BS01 dna ? GO:0003676 ... P61978 12093748 PDBbind: Kd=3uM
    1188 1j5n:A (-1.00) BS01 dna ? GO:0001195 ... P11632 12381320 PDBbind: Kd=7.5nM
    1189 1j5n:A (-1.00) BS02 dna ? GO:0001195 ... P11632 12381320 PDBbind: Kd=7.5nM
    1190 1j75:A (1.85) BS01 dna ? GO:0003677 ... Q9QY24 11524677 PDBbind: Kd=35nM
    1191 1jak:A (1.75) BS02 IFG 3.2.1.52 GO:0004553 ... O85361 11522797 MOAD: Ki=2.7uM
    PDBbind: -logKd/Ki=5.57, Ki=2.7uM
    1192 1jao:A (2.4) BS01 0D3 3.4.24.34 GO:0004222 ... P22894 7737183 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    1193 1jaq:A (2.4) BS02 01S 3.4.24.34 GO:0004222 ... P22894 7737183 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    BindingDB: Ki=121000nM
    1194 1jbr:A (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244 PDBbind: Kd=1uM
    1195 1jbr:B (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244 PDBbind: Kd=1uM
    1196 1jcx:A (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    PDBbind: -logKd/Ki=5.15, Ki=7.0uM
    1197 1jcx:B (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    PDBbind: -logKd/Ki=5.15, Ki=7.0uM
    1198 1jd0:A (1.5) BS02 AZM 4.2.1.1 GO:0004089 ... O43570 11493685 PDBbind: -logKd/Ki=8.24, Ki=5.7nM
    BindingDB: Ki=5.7nM, Kd=130nM, IC50=60nM
    1199 1jdj:A (2.2) BS01 CFP 1.1.1.8 GO:0005829 ... P90551 12445769 PDBbind: -logKd/Ki=2.30, IC50=5mM
    1200 1je8:A (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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