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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10201 3qmi:A (2.1) BS01 dna ? GO:0003677 ... Q9P0U4 21407193 PDBbind: Kd=12uM
    10202 3qmi:A (2.1) BS02 dna ? GO:0003677 ... Q9P0U4 21407193 PDBbind: Kd=12uM
    10203 3qmk:A (2.21) BS01 SGN ? GO:0016020 ... P51693 21930949 PDBbind: -logKd/Ki=6.10, Kd=0.787uM
    10204 3qmk:A (2.21) BS02 IDS ? GO:0016020 ... P51693 21930949 PDBbind: -logKd/Ki=6.10, Kd=0.787uM
    10205 3qmk:A (2.21) BS03 SGN ? GO:0016020 ... P51693 21930949 PDBbind: -logKd/Ki=6.10, Kd=0.787uM
    10206 3qmk:A (2.21) BS04 IDS ? GO:0016020 ... P51693 21930949 PDBbind: -logKd/Ki=6.10, Kd=0.787uM
    10207 3qnd:A (2.4) BS02 SIA ? GO:0007155 ... Q64823 21648036 PDBbind: -logKd/Ki=4.85, Kd=14uM
    10208 3qnd:C (2.4) BS02 SIA ? GO:0007155 ... Q64823 21648036 PDBbind: -logKd/Ki=4.85, Kd=14uM
    10209 3qnn:A (1.92) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22616982 PDBbind: Kd=4uM
    10210 3qnn:A (1.92) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22616982 PDBbind: Kd=4uM
    10211 3qno:A (1.88) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22616982 PDBbind: Kd=270uM
    10212 3qno:A (1.88) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22616982 PDBbind: Kd=270uM
    10213 3qo3:A (2.15) BS01 ATP ? GO:0003723 ... P0A6X3 23226421 PDBbind: -logKd/Ki=6.90, Kd~125nM
    10214 3qo3:B (2.15) BS01 ATP ? GO:0003723 ... P0A6X3 23226421 PDBbind: -logKd/Ki=6.90, Kd~125nM
    10215 3qo3:B (2.15) BS02 ATP ? GO:0003723 ... P0A6X3 23226421 PDBbind: -logKd/Ki=6.90, Kd~125nM
    10216 3qo9:A (2.6) BS01 QO9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 21446702 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    10217 3qox:A (2.3) BS01 SAH 2.1.1.360 GO:0031151 ... Q8TEK3 21564555 MOAD: Ki=0.27uM
    PDBbind: -logKd/Ki=6.57, Ki=0.27uM
    BindingDB: Ki=160nM, IC50=600nM, Kd=150nM
    10218 3qpn:A (2.0) BS02 PFK 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    10219 3qpo:A (1.8) BS02 PFR 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=247nM
    PDBbind: -logKd/Ki=6.61, IC50=247nM
    BindingDB: IC50=247nM
    10220 3qpp:A (1.8) BS02 PFW 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    10221 3qqa:A (2.2) BS01 TCH ? GO:0003677 ... Q7B8P6 21328631 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    10222 3qqk:A (1.86) BS01 X02 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.82, IC50=15uM
    BindingDB: IC50=15000nM
    10223 3qqs:A (1.97) BS04 17C 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    10224 3qqu:A (2.9) BS01 01P 2.7.10.1 GO:0004672 ... P08069 21414779 PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    BindingDB: IC50=2.4nM
    10225 3qri:A (2.1) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    10226 3qrj:A (1.82) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    10227 3qrk:A (2.3) BS01 9DP 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=57nM
    PDBbind: -logKd/Ki=7.24, IC50=57nM
    10228 3qs1:A (3.1) BS01 006 3.4.23.38 GO:0004190 ... P39898 21521654 PDBbind: -logKd/Ki=7.96, Ki=11.0nM
    BindingDB: IC50=280nM
    10229 3qs1:B (3.1) BS01 006 3.4.23.38 GO:0004190 ... P39898 21521654 PDBbind: -logKd/Ki=7.96, Ki=11.0nM
    BindingDB: IC50=280nM
    10230 3qs4:A (2.631) BS01 TRP ? GO:0005886 ... O67854 21952050 PDBbind: -logKd/Ki=4.68, Kd=21.0uM
    10231 3qs4:A (2.631) BS02 TRP ? GO:0005886 ... O67854 21952050 PDBbind: -logKd/Ki=4.68, Kd=21.0uM
    10232 3qs4:A (2.631) BS03 TRP ? GO:0005886 ... O67854 21952050 PDBbind: -logKd/Ki=4.68, Kd=21.0uM
    10233 3qs5:A (2.6) BS01 TRP ? GO:0005886 ... O67854 21952050 PDBbind: -logKd/Ki=4.71, Kd=19.6uM
    10234 3qs6:A (2.801) BS01 TRP ? GO:0005886 ... O67854 21952050 PDBbind: -logKd/Ki=4.89, Kd=12.8uM
    10235 3qs8:A (2.0) BS04 17D 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.74, Ki=18uM
    10236 3qs8:A (2.0) BS05 17D 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.74, Ki=18uM
    10237 3qsb:A (1.9) BS01 743 2.7.7.7 GO:0003677 ... P0A988 21604761 MOAD: ic50=8.3uM
    PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    10238 3qsd:A (1.3) BS01 074 3.4.22.1 GO:0006508 ... Q8MNY2 21832058 PDBbind: -logKd/Ki=7.19, IC50=63.9nM
    10239 3qsu:A (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10240 3qsu:B (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10241 3qsu:C (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10242 3qsu:E (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10243 3qsu:F (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10244 3qsu:H (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117 PDBbind: Kd=19.5nM
    10245 3qt6:A (2.047) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=4.3uM
    PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    10246 3qt7:A (2.199) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=49uM
    PDBbind: -logKd/Ki=7.31, Kd=49nM
    10247 3qtf:A (1.5703) BS01 05S 3.6.4.10 GO:0005524 ... P07900 21420297 MOAD: ic50=0.11uM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=110nM
    10248 3qti:A (2.0) BS01 3QT 2.7.10.1 GO:0004672 ... P08581 21697284 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=14nM
    10249 3qto:H (1.52) BS03 10P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=74.8uM
    PDBbind: -logKd/Ki=4.13, Ki=74.8uM
    10250 3qtq:A (1.8) BS01 X35 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    10251 3qtr:A (1.85) BS01 X36 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.03, IC50=0.93uM
    10252 3qts:A (1.9) BS01 X46 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    10253 3qtu:A (1.82) BS01 X44 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    10254 3qtv:H (1.63) BS03 06P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=22.5uM
    PDBbind: -logKd/Ki=4.65, Ki=22.5uM
    10255 3qtw:A (1.85) BS01 X3A 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    10256 3qtx:A (1.95) BS01 X43 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    10257 3qtz:A (2.0) BS01 X42 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    10258 3qu0:A (1.95) BS01 X40 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=0.900000nM
    10259 3que:A (2.7) BS01 3FF 2.7.11.24 GO:0000077 ... Q16539 22198732 PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    BindingDB: IC50=40nM
    10260 3qup:A (1.9) BS01 LUN 2.7.10.1 GO:0004672 ... P55144 22119469 MOAD: ic50=0.476uM
    PDBbind: -logKd/Ki=6.32, IC50=0.476uM
    10261 3qvu:A (2.5) BS01 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    PDBbind: -logKd/Ki=3.55, Ki=283uM
    10262 3qvv:A (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    PDBbind: -logKd/Ki=4.42, Ki=38uM
    10263 3qwc:H (1.75) BS03 98P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=55.4uM
    PDBbind: -logKd/Ki=4.26, Ki=55.4uM
    10264 3qx5:H (1.35) BS03 02P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=63.5uM
    PDBbind: -logKd/Ki=4.20, Ki=63.5uM
    10265 3qx8:A (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    PDBbind: -logKd/Ki=2.86, Kd=1.37mM
    10266 3qx9:A (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    PDBbind: -logKd/Ki=4.05, Kd=0.09mM
    10267 3qxc:A (1.34) BS01 ATP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    10268 3qxh:A (1.36) BS02 ADP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    10269 3qxm:A (1.65) BS01 NDZ ? GO:0015276 ... Q13002 21893069 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    10270 3qxp:A (1.75) BS01 X64 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=1.1nM
    10271 3qxt:A (1.7) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=6700nM
    PDBbind: -logKd/Ki=5.22, Kd=6uM
    10272 3qxv:A (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    PDBbind: -logKd/Ki=8.40, Kd=4nM
    10273 3qym:A (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10274 3qym:B (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10275 3qym:C (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10276 3qym:D (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10277 3qym:E (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10278 3qym:F (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10279 3qym:G (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10280 3qym:H (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    10281 3qyy:A (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    10282 3qyy:A (1.9) BS03 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    10283 3qyy:B (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    10284 3qyy:B (1.9) BS02 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    10285 3qzq:A (1.7001) BS01 AG7 ? GO:0004197 ... E7E815 21813612 PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    10286 3r00:A (2.1) BS01 UNJ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=8.5uM
    PDBbind: -logKd/Ki=5.07, IC50=8.5uM
    BindingDB: IC50=9000nM
    10287 3r01:A (2.6) BS01 UNE 2.7.11.1 GO:0004672 ... P11309 21507633 PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=6000nM
    10288 3r02:A (1.95) BS01 UNM 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    10289 3r04:A (1.7) BS01 UNQ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    10290 3r0i:A (2.1) BS02 C0K 1.1.1.267 GO:0008299 ... P45568 21866890 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    10291 3r0t:A (1.75) BS01 FU9 2.7.11.1 GO:0004672 ... P68400 21870818 MOAD: ic50=0.91nM
    PDBbind: -logKd/Ki=9.04, IC50=0.91nM
    BindingDB: IC50=>750nM
    10292 3r0w:A (1.7) BS01 RSY 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=30.3uM
    PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    10293 3r0w:B (1.7) BS01 RSY 3.1.26.13 GO:0004190 ... Q000H7 22469467 PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    10294 3r0y:A (1.65) BS01 RSZ 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=14.53uM
    PDBbind: -logKd/Ki=4.84, Kd=14.53uM
    10295 3r0y:B (1.65) BS01 RSZ 3.1.26.13 GO:0004190 ... Q000H7 22469467 PDBbind: -logKd/Ki=4.84, Kd=14.53uM
    10296 3r16:A (1.6) BS02 5UN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    BindingDB: Ki=50nM
    10297 3r17:B (1.7) BS02 5UM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=390nM
    PDBbind: -logKd/Ki=6.41, Ki=390nM
    BindingDB: Ki=390nM
    10298 3r1v:A (2.19) BS01 AZB ? GO:0005549 ... Q7PXT9 22019737 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    10299 3r21:A (2.9) BS01 D36 2.7.11.1 GO:0000212 ... O14965 21798738 PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM
    10300 3r22:A (2.9) BS01 D37 2.7.11.1 GO:0000212 ... O14965 21798738 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    10301 3r24:A (2.0) BS01 SAM 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0004483 ... P0C6X7 22022266 PDBbind: -logKd/Ki=5.25, Kd=5.59uM
    10302 3r2a:A (3.0) BS01 RHN ? GO:0003677 ... P19793 21613212 PDBbind: -logKd/Ki=6.12, IC50=0.75uM
    10303 3r2a:C (3.0) BS01 RHN ? GO:0003677 ... P19793 21613212 PDBbind: -logKd/Ki=6.12, IC50=0.75uM
    10304 3r2b:A (2.9) BS01 05B 2.7.11.1 GO:0004672 ... P49137 21565500 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=620nM
    10305 3r2f:A (2.53) BS01 PB0 3.4.23.46 GO:0004190 ... P56817 21782431 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    10306 3r2y:A (3.0) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 21565500 PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    BindingDB: IC50=8.5nM, EC50=49nM
    10307 3r4m:A (1.7) BS01 WOE 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=1200nM
    10308 3r4n:A (2.0) BS01 FU5 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.13uM
    PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    BindingDB: Ki=130nM
    10309 3r4o:A (2.65) BS01 FU3 3.6.4.10 GO:0005524 ... P07900 21438541 PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    10310 3r4p:A (1.7) BS01 FU7 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    10311 3r5m:A (2.8) BS02 MLO ? GO:0003677 ... P19793 22140563 PDBbind: -logKd/Ki=4.34, Kd=45.7uM
    10312 3r5n:A (2.0) BS01 MLO ? GO:0003677 ... P37231 22140563 MOAD: Kd=1.67uM
    PDBbind: -logKd/Ki=5.78, Kd=1.67uM
    10313 3r5n:A (2.0) BS02 MLO ? GO:0003677 ... P37231 22140563 MOAD: Kd=1.67uM
    PDBbind: -logKd/Ki=5.78, Kd=1.67uM
    10314 3r5t:A (1.45) BS01 VBN ? GO:0030288 ... Q9RCF6 22291019 PDBbind: -logKd/Ki=8.58, Kd=2.65nM
    10315 3r6c:A (1.83) BS04 17N 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.72, Ki=19uM
    10316 3r6c:A (1.83) BS05 17N 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.72, Ki=19uM
    10317 3r6t:A (1.2) BS02 LU1 2.1.1.6 GO:0000287 ... P22734 22349227 MOAD: ic50=1368nM
    PDBbind: -logKd/Ki=5.86, IC50=1.368uM
    10318 3r6u:A (1.61) BS01 CHT ? GO:0005886 ... Q45462 21658392 MOAD: Kd=30.5uM
    PDBbind: -logKd/Ki=4.52, Kd=30.5uM
    10319 3r7o:A (2.3) BS01 M61 2.7.10.1 GO:0004672 ... P08581 21247903 PDBbind: -logKd/Ki=8.36, Kd=4.4nM
    BindingDB: IC50=3.0nM
    10320 3r7q:A (2.5) BS01 FAV 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21636270 MOAD: ic50=0.108uM
    PDBbind: -logKd/Ki=6.97, IC50=0.108uM
    10321 3r7r:A (2.9) BS01 FAZ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21636270 PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    10322 3r88:B (1.73) BS04 14F 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.82, Ki=15uM
    10323 3r8f:A (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    10324 3r8f:B (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    10325 3r8f:C (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    10326 3r8f:D (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    10327 3r8i:A (2.3) BS01 XCX ? GO:0003677 ... P37231 22081932 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    BindingDB: EC50=110nM, Kd=4500nM
    10328 3r8u:A (2.0) BS01 Z31 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.30, IC50=5uM
    10329 3r8v:A (1.9) BS01 Z62 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    10330 3r8z:A (1.85) BS01 Z63 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.31, IC50=49uM
    10331 3r91:A (1.579) BS01 06H 3.6.4.10 GO:0005524 ... P07900 21515049 MOAD: ic50=0.092uM
    PDBbind: -logKd/Ki=7.04, IC50=92nM
    10332 3r92:A (1.5801) BS01 06J 3.6.4.10 GO:0005524 ... P07900 21605975 MOAD: ic50=0.883uM
    PDBbind: -logKd/Ki=7.02, IC50=96nM
    BindingDB: IC50=96nM
    10333 3r9d:A (1.95) BS01 X6B 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.15, IC50=71uM
    10334 3r9h:A (2.1) BS01 Z67 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    10335 3r9n:A (1.75) BS01 Z68 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    10336 3r9o:A (1.9) BS01 Z71 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    10337 3r9w:A (2.05) BS01 rna ? GO:0000028 ... O67800 21646538 PDBbind: Kd=12.6nM
    10338 3rah:A (1.75) BS01 O1Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.92, IC50=12nM
    10339 3rak:A (1.75) BS01 03Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    10340 3ral:A (1.75) BS01 04Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    10341 3rbm:A (2.61) BS03 B73 ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.57, Ki=270nM
    10342 3rbm:A (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.57, Ki=270nM
    10343 3rbm:B (2.61) BS01 B73 ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.57, Ki=270nM
    10344 3rbm:B (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.57, Ki=270nM
    10345 3rbu:A (1.6) BS04 G88 3.4.17.21 GO:0004180 ... Q04609 22178733 MOAD: Ki=370pM
    PDBbind: -logKd/Ki=9.43, Ki=370pM
    BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM, EC50=0.620000nM
    10346 3rcd:A (3.21) BS01 03P 2.7.10.1 GO:0004672 ... P04626 22003817 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    10347 3rcj:A (1.7) BS01 3RC 2.7.11.1 GO:0004672 ... O15530 21625704 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    10348 3rde:A (1.892) BS02 OYP 1.13.11.-
    1.13.11.12
    1.13.11.31
    1.13.11.33    		 GO:0005506 ... P16469 22795085 PDBbind: -logKd/Ki=7.46, IC50=0.035uM
    BindingDB: IC50=35nM
    10349 3rdh:A (2.39) BS01 3RD ? GO:0000122 ... P63104 21908710 PDBbind: -logKd/Ki=5.03, IC50=9.3uM
    BindingDB: IC50=9300nM
    10350 3rdo:A (1.404) BS01 BTN ? GO:0009374 ... P22629 21520321 MOAD: Kd=0.14nM
    PDBbind: -logKd/Ki=9.85, Kd=0.14nM
    BindingDB: Kd=1.000000nM
    10351 3rdq:A (1.6) BS01 DTB ? GO:0009374 ... P22629 21520321 MOAD: Kd=0.49nM
    PDBbind: -logKd/Ki=9.31, Kd=0.49nM
    10352 3re4:A (1.997) BS01 TO1 2.7.11.1 GO:0004672 ... O28471 22629386 MOAD: Kd~40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    10353 3rer:A (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10354 3rer:B (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10355 3rer:C (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10356 3rer:D (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10357 3rer:E (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10358 3rer:F (1.7) BS01 rna ? GO:0003723 ... P0A6X3 21979921 PDBbind: Kd=16.7nM
    10359 3rey:A (3.309) BS01 XAC ? GO:0001609 ... P29274 21885291 PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: Ki=63nM
    10360 3rf4:A (1.8) BS01 FUN ? GO:0005125 ... A4GRE3 21944748 MOAD: Ki=0.56uM
    PDBbind: -logKd/Ki=6.25, Ki=0.56uM
    10361 3rf4:C (1.8) BS01 FUN ? GO:0005125 ... A4GRE3 21944748 MOAD: Ki=0.56uM
    PDBbind: -logKd/Ki=6.25, Ki=0.56uM
    10362 3rf5:A (2.1) BS01 FUZ ? GO:0005125 ... A4GRE3 21944748 MOAD: Ki=2.37uM
    PDBbind: -logKd/Ki=5.63, Ki=2.37uM
    10363 3rf5:C (2.1) BS01 FUZ ? GO:0005125 ... A4GRE3 21944748 MOAD: Ki=2.37uM
    PDBbind: -logKd/Ki=5.63, Ki=2.37uM
    10364 3rf5:C (2.1) BS02 FUZ ? GO:0005125 ... A4GRE3 21944748 MOAD: Ki=2.37uM
    PDBbind: -logKd/Ki=5.63, Ki=2.37uM
    10365 3rg2:A (3.1) BS01 SVS 3.3.2.1
    6.2.1.71
    6.3.2.14    		 GO:0005515 ... P0ADI4
    P10378    		 22365602 PDBbind: -logKd/Ki=4.20, Kd=63uM
    10366 3rg2:A (3.1) BS02 PNS 3.3.2.1
    6.2.1.71
    6.3.2.14    		 GO:0005515 ... P0ADI4
    P10378    		 22365602 PDBbind: -logKd/Ki=4.20, Kd=63uM
    10367 3rg2:B (3.1) BS01 PNS 3.3.2.1
    6.2.1.71
    6.3.2.14    		 GO:0005515 ... P0ADI4
    P10378    		 22365602 PDBbind: -logKd/Ki=4.20, Kd=63uM
    10368 3rg2:B (3.1) BS02 SVS 3.3.2.1
    6.2.1.71
    6.3.2.14    		 GO:0005515 ... P0ADI4
    P10378    		 22365602 PDBbind: -logKd/Ki=4.20, Kd=63uM
    10369 3rhk:A (1.94) BS01 M97 2.7.10.1 GO:0004672 ... P08581 21454604 MOAD: ic50=520nM
    PDBbind: -logKd/Ki=6.26, IC50=548nM
    10370 3rhx:B (2.01) BS01 3RH 2.7.10.1 GO:0004672 ... P11362 21454610 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    10371 3ri1:A (2.1) BS01 3RH 2.7.10.1 GO:0004672 ... P21802 21454610 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    BindingDB: IC50=1230nM
    10372 3rik:B (2.48) BS01 3RI 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 22047104 MOAD: ic50=3.4mM
    PDBbind: -logKd/Ki=2.47, IC50=3.4mM
    10373 3ril:A (2.4) BS01 3RK 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 22047104 MOAD: ic50=146uM
    PDBbind: -logKd/Ki=3.84, IC50=146uM
    BindingDB: Ki=12800nM
    10374 3ril:B (2.4) BS01 3RK 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 22047104 MOAD: ic50=146uM
    PDBbind: -logKd/Ki=3.84, IC50=146uM
    BindingDB: Ki=12800nM
    10375 3rin:A (2.2) BS01 I2O 2.7.11.24 GO:0000077 ... Q16539 21696951 MOAD: ic50=1.3nM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.3nM
    10376 3rj7:A (1.2) BS02 RCS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22344779 PDBbind: -logKd/Ki=7.60, Ki=25.3nM
    10377 3rj7:A (1.2) BS03 RCS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22344779 PDBbind: -logKd/Ki=7.60, Ki=25.3nM
    10378 3rjc:A (1.85) BS01 06Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.24, IC50=5.7uM
    10379 3rjw:A (2.56) BS06 CIQ 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q96KQ7 21743462 PDBbind: -logKd/Ki=7.57, Kd=27nM
    BindingDB: IC50=<15nM, Ki=3.7nM, Kd=1420nM
    10380 3rk5:A (2.0) BS01 07Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    10381 3rk7:A (1.8) BS01 08Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    10382 3rk9:A (1.85) BS01 09Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    10383 3rkb:A (2.0) BS01 12Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    10384 3rkz:A (1.5693) BS01 06T 3.6.4.10 GO:0005524 ... P07900 21715165 MOAD: ic50=0.083uM
    PDBbind: -logKd/Ki=7.08, IC50=83nM
    BindingDB: IC50=83nM
    10385 3rl3:A (1.42) BS06 5GP 3.1.-.- GO:0000166 ... B1WBP0 21824479 MOAD: ic50=67nM
    PDBbind: -logKd/Ki=7.17, IC50=67nM
    10386 3rl4:A (1.29) BS06 5GP 3.1.-.- GO:0000166 ... B1WBP0 21824479 MOAD: ic50=3800nM
    PDBbind: -logKd/Ki=5.42, IC50=3800nM
    10387 3rlb:A (2.0) BS01 VIB N/A GO:0005886 ... N/A 21706007 MOAD: Kd=120pM
    PDBbind: -logKd/Ki=9.92, Kd=120pM
    10388 3rlp:A (1.7) BS01 3RP 3.6.4.10 GO:0005524 ... P07900 21612924 MOAD: Kd=0.084uM
    PDBbind: -logKd/Ki=7.08, Kd=84nM
    10389 3rlq:A (1.9) BS01 3RQ 3.6.4.10 GO:0005524 ... P07900 21612924 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=40nM
    10390 3rlr:A (1.7) BS01 3RR 3.6.4.10 GO:0005524 ... P07900 21612924 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=30nM
    10391 3rm4:A (1.9) BS01 3RM 3.2.1.14 GO:0004553 ... Q9BZP6 20666458 MOAD: Kd=1.69uM
    PDBbind: -logKd/Ki=5.77, Kd=1.69uM
    BindingDB: IC50=210nM, Kd=1690nM
    10392 3rm8:A (1.8) BS01 RM8 3.2.1.14 GO:0004553 ... Q9BZP6 20666458 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    BindingDB: IC50=700nM
    10393 3rm9:A (2.1) BS01 613 3.2.1.14 GO:0004553 ... Q9BZP6 20666458 MOAD: Kd=17uM
    PDBbind: -logKd/Ki=4.77, Kd=17uM
    BindingDB: Kd=17000nM, IC50=13000nM
    10394 3rme:A (1.8) BS01 RME 3.2.1.14 GO:0004553 ... Q9BZP6 20666458 MOAD: ic50=22uM
    PDBbind: -logKd/Ki=4.66, IC50=22uM
    BindingDB: IC50=22000nM
    10395 3rmf:A (1.75) BS01 20Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.09, IC50=82uM
    10396 3rn2:A (2.55) BS01 dna ? GO:0002218 ... O14862 22483801 PDBbind: Kd=0.112uM
    10397 3rn2:A (2.55) BS02 dna ? GO:0002218 ... O14862 22483801 PDBbind: Kd=0.112uM
    10398 3rn2:B (2.55) BS01 dna ? GO:0002218 ... O14862 22483801 PDBbind: Kd=0.112uM
    10399 3rn2:B (2.55) BS02 dna ? GO:0002218 ... O14862 22483801 PDBbind: Kd=0.112uM
    10400 3rni:A (1.95) BS01 21Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.17, IC50=6.7uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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