Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9601 3nnv:A (2.1) BS01 437 2.7.11.24 GO:0000077 ... Q16539 20800479 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    BindingDB: IC50=27nM
    9602 3nnw:A (1.89) BS01 EDD 2.7.11.24 GO:0000077 ... Q16539 20800479 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    9603 3nnx:A (2.28) BS01 EDD 2.7.11.24 GO:0000077 ... Q16539 20800479 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    9604 3nox:A (2.338) BS01 6A5 3.4.14.5 GO:0001618 ... P27487 20684603 MOAD: Ki=2.2nM
    PDBbind: -logKd/Ki=8.66, Ki=2.2nM
    BindingDB: Ki=2.2nM
    9605 3np7:A (2.05) BS01 Z15 2.4.1.1 GO:0000166 ... P00489 21821421 MOAD: ic50=95uM
    PDBbind: -logKd/Ki=4.02, IC50=95uM
    BindingDB: IC50=169900nM
    9606 3np7:A (2.05) BS02 Z15 2.4.1.1 GO:0000166 ... P00489 21821421 MOAD: ic50=95uM
    PDBbind: -logKd/Ki=4.02, IC50=95uM
    BindingDB: IC50=169900nM
    9607 3np9:A (1.999) BS01 Z2T 2.4.1.1 GO:0000166 ... P00489 21821421 MOAD: ic50=39.8uM
    PDBbind: -logKd/Ki=4.40, IC50=39.8uM
    BindingDB: IC50=39800nM
    9608 3npa:A (1.969) BS01 Z57 2.4.1.1 GO:0000166 ... P00489 21821421 MOAD: ic50=136.4uM
    PDBbind: -logKd/Ki=3.87, IC50=136.4uM
    BindingDB: IC50=136400nM
    9609 3npc:A (2.35) BS01 B96 2.7.11.24 GO:0004672 ... P45984 20655210 PDBbind: -logKd/Ki=8.34, Kd=4.6nM
    BindingDB: Kd=7.3nM, IC50=6nM
    9610 3nq9:A (1.9) BS01 OCA ? GO:0005515 ... P02754 21360616 MOAD: Kd=92.6uM
    PDBbind: -logKd/Ki=4.03, Kd=92.6uM
    9611 3nrm:A (3.05) BS01 NRM 2.7.11.1 GO:0000212 ... O14965 20674350 PDBbind: -logKd/Ki=8.40, IC50=4nM
    9612 3nrz:C (1.8) BS01 HPA 1.17.1.4
    1.17.3.2    		 GO:0005506 ... P80457 20615869 PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    9613 3ns7:A (2.6) BS01 3NS 3.4.22.36 GO:0004197 ... P29466 20656488 PDBbind: -logKd/Ki=8.33, Ki=4.68nM
    9614 3ns7:B (2.6) BS01 3NS 3.4.22.36 GO:0004197 ... P29466 20656488 PDBbind: -logKd/Ki=8.33, Ki=4.68nM
    9615 3ns9:A (1.78) BS01 NS9 2.7.11.22 GO:0000082 ... P24941 21080703 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    9616 3nsh:A (2.2) BS01 957 3.4.23.46 GO:0004190 ... P56817 20822903 MOAD: ic50=470nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    BindingDB: IC50=470nM
    9617 3nsn:A (2.1) BS01 TMX 3.2.1.52 GO:0000272 ... Q06GJ0 21106526 PDBbind: -logKd/Ki=7.19, Ki=65nM
    9618 3nsq:B (2.6) BS01 CHZ ? GO:0003677 ... P19793 21084305 PDBbind: -logKd/Ki=5.21, Kd=6.2uM
    9619 3ntp:A (1.762) BS01 RZD 5.2.1.8 GO:0000413 ... Q13526 21980916 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    9620 3nu3:A (1.02) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    9621 3nu3:B (1.02) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=0.15nM
    PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    9622 3nu4:A (1.2) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    9623 3nu4:B (1.2) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    9624 3nu5:A (1.29) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=8.35, Ki=4.5nM
    9625 3nu5:B (1.29) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=4.5nM
    PDBbind: -logKd/Ki=8.35, Ki=4.5nM
    9626 3nu6:A (1.16) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    9627 3nu6:B (1.16) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    9628 3nu9:A (1.85) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    9629 3nu9:B (1.85) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    9630 3nuj:A (1.5) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=9.39, Ki=0.41nM
    9631 3nuj:B (1.5) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=0.41nM
    PDBbind: -logKd/Ki=9.39, Ki=0.41nM
    9632 3nuo:A (1.35) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    9633 3nuo:B (1.35) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20695887 MOAD: Ki=0.16nM
    PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    9634 3nus:A (2.75) BS01 JNZ 2.7.11.1 GO:0004672 ... O15530 24900229 PDBbind: -logKd/Ki=3.51, IC50=311uM
    9635 3nuu:A (1.9803) BS01 JOZ 2.7.11.1 GO:0004672 ... O15530 24900229 PDBbind: -logKd/Ki=3.77, IC50=169uM
    BindingDB: IC50=169000nM
    9636 3nuy:A (2.1) BS01 JPZ 2.7.11.1 GO:0004672 ... O15530 24900229 PDBbind: -logKd/Ki=3.46, IC50=345uM
    9637 3nw5:A (2.14) BS01 LGX 2.7.10.1 GO:0004672 ... P08069 20675137 MOAD: ic50=8400nM
    PDBbind: -logKd/Ki=5.08, IC50=8400nM
    BindingDB: IC50=8400nM
    9638 3nw6:A (2.2) BS01 LGW 2.7.10.1 GO:0004672 ... P08069 20675137 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=162nM
    9639 3nw7:A (2.11) BS01 LGV 2.7.10.1 GO:0004672 ... P08069 20675137 MOAD: ic50=5.3nM
    PDBbind: -logKd/Ki=8.28, IC50=5.3nM
    BindingDB: IC50=5.3nM
    9640 3nw9:A (1.65) BS02 637 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    9641 3nwb:A (1.3) BS02 659 2.1.1.6 GO:0000287 ... P22734 22349227 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    9642 3nwe:A (1.5) BS02 662 2.1.1.6 GO:0000287 ... P22734 22349227 MOAD: ic50=25nM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    9643 3nww:A (2.09) BS01 3NW 2.7.11.24 GO:0000077 ... Q16539 20732813 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    9644 3nx7:A (1.8) BS06 NHK 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=7.88nM
    PDBbind: -logKd/Ki=8.10, Kd=7.88nM
    BindingDB: Ki=7.6nM
    9645 3nxq:A (1.99) BS02 RX4 3.4.15.1 GO:0006508 ... P12821 20826823 PDBbind: -logKd/Ki=8.15, Ki=7nM
    9646 3nyd:A (1.23) BS01 3NY 3.2.1.8 GO:0004553 ... P23360 22357762 PDBbind: -logKd/Ki=3.48, Ki=330uM
    9647 3nyn:A (2.72) BS01 SGV 2.7.11.16 GO:0004672 ... P43250 20729810 PDBbind: -logKd/Ki=6.00, Kd=1uM
    9648 3nyx:A (2.5) BS01 TZ1 2.7.10.2 GO:0004672 ... P29597 21117080 MOAD: Ki=32nM
    PDBbind: -logKd/Ki=7.49, Ki=32nM
    9649 3nzc:X (2.0) BS01 D2O 1.5.1.3 GO:0004146 ... P16184 21206056 PDBbind: -logKd/Ki=7.02, IC50=96nM
    9650 3nzk:A (1.8) BS01 C90 3.5.1.108 GO:0006796 ... A1JJJ9 21171638 MOAD: Ki=0.54nM
    PDBbind: -logKd/Ki=9.27, Ki=0.54nM
    9651 3nzs:A (2.75) BS01 NZS 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 20822905 PDBbind: -logKd/Ki=7.12, IC50=75nM
    9652 3nzu:A (2.6) BS01 NZU 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 20822905 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    9653 3o0g:B (1.95) BS01 3O0 2.7.11.1 GO:0000226 ... Q00535 16039528 MOAD: Ki=0.6uM
    PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    9654 3o0j:A (1.95) BS02 3OJ 3.1.4.53 GO:0004114 ... Q07343 22841723 PDBbind: -logKd/Ki=7.19, Ki=65nM
    BindingDB: IC50=240nM
    9655 3o0u:A (1.8) BS01 O47 3.4.22.38 GO:0006508 ... P43235 20843687 PDBbind: -logKd/Ki=7.92, IC50=12nM
    9656 3o1g:A (1.65) BS01 O75 3.4.22.38 GO:0006508 ... P43235 20843687 PDBbind: -logKd/Ki=9.00, IC50<=1nM
    BindingDB: IC50=<1nM
    9657 3o23:A (2.1) BS01 MQY 2.7.10.1 GO:0004672 ... P08069 21441024 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    9658 3o2m:A (2.7) BS02 46A 2.7.11.24 GO:0004672 ... P45983 21090814 PDBbind: -logKd/Ki=4.80, Kd=16uM
    9659 3o2m:A (2.7) BS03 46A 2.7.11.24 GO:0004672 ... P45983 21090814 PDBbind: -logKd/Ki=4.80, Kd=16uM
    9660 3o3i:X (2.801) BS01 rna 3.1.26.- GO:0003723 ... Q96J94 21193640 PDBbind: Kd=16.6uM
    9661 3o3j:A (3.0) BS05 BB4 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676 PDBbind: -logKd/Ki=6.40, Ki=400nM
    9662 3o4k:A (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594 PDBbind: -logKd/Ki=7.62, Kd=24nM
    9663 3o4k:C (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    9664 3o4k:D (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594 PDBbind: -logKd/Ki=7.62, Kd=24nM
    9665 3o56:A (2.42) BS02 ZG1 3.1.4.53 GO:0004114 ... Q07343 20732811 MOAD: ic50=794pM
    PDBbind: -logKd/Ki=9.10, Kd=794pM
    9666 3o57:A (2.0) BS02 ZG2 3.1.4.53 GO:0004114 ... Q07343 20732811 MOAD: ic50=79.4pM
    PDBbind: -logKd/Ki=10.10, IC50=79.4pM
    9667 3o5n:E (1.83) BS01 BR0 ? N/A Q4ACU6 21626699 MOAD: Ki=17.2uM
    PDBbind: -logKd/Ki=4.76, Ki=17.2uM
    9668 3o5x:A (2.0) BS01 JZG 3.1.3.48 GO:0004725 ... Q06124 20170098 MOAD: ic50=5.5uM
    PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    BindingDB: IC50=5500nM, Ki=5200nM
    9669 3o64:B (1.88) BS01 786 3.4.24.86 GO:0004222 ... P78536 21458257 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    BindingDB: IC50=720nM, Ki=0.400000nM
    9670 3o6e:X (2.904) BS01 rna 3.1.26.- GO:0003723 ... Q96J94 21193640 PDBbind: Kd=6.5uM
    9671 3o6t:A (2.4) BS01 PX5 ? GO:0005576 ... P9WG67 20981751 PDBbind: -logKd/Ki=5.22, IC50=6uM
    9672 3o75:A (2.3) BS01 F1X ? GO:0003677 ... Q88PQ6 21239488 MOAD: Kd=209nM
    PDBbind: -logKd/Ki=6.68, Kd=209nM
    9673 3o7u:A (1.708) BS04 O7U 3.5.4.-
    3.5.4.1    		 GO:0004131 ... P25524 21545144 MOAD: Ki=52nM
    PDBbind: -logKd/Ki=7.28, Ki=52nM
    9674 3o84:A (2.1) BS01 HTJ N/A GO:0008668 ... N/A 20853905 MOAD: Kd=58nM
    PDBbind: -logKd/Ki=7.24, Kd=58nM
    9675 3o86:A (1.6) BS01 BSF 3.5.2.6 GO:0008800 ... P00811 20945905 PDBbind: -logKd/Ki=7.15, Ki=70nM
    9676 3o87:A (1.78) BS01 BSG 3.5.2.6 GO:0008800 ... P00811 20945905 PDBbind: -logKd/Ki=7.60, Ki=25nM
    9677 3o88:A (1.64) BS01 BSH 3.5.2.6 GO:0008800 ... P00811 20945905 PDBbind: -logKd/Ki=6.37, Ki=430nM
    9678 3o8g:A (1.9) BS01 O8G ? GO:0000976 ... P9WMC1 20704273 MOAD: ic50=7.4uM
    PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    9679 3o8h:A (1.9) BS01 O8H ? GO:0000976 ... P9WMC1 20704273 MOAD: ic50=580nM
    PDBbind: -logKd/Ki=6.24, IC50=580nM
    BindingDB: IC50=580nM
    9680 3o8p:A (2.1) BS01 BMU 2.7.11.24 GO:0000077 ... Q16539 N/A PDBbind: -logKd/Ki=6.46, Kd=350nM
    BindingDB: Kd=1160nM, kon=118000M-1-s-1, koff=0.140000s-1, IC50=21000nM
    9681 3o95:A (2.85) BS01 01T 3.4.14.5 GO:0001618 ... P27487 21218817 PDBbind: -logKd/Ki=8.28, IC50=5.3nM
    BindingDB: IC50=5.3nM
    9682 3o96:A (2.7) BS01 IQO 2.7.11.1 GO:0001649 ... P31749 20886116 PDBbind: -logKd/Ki=7.24, IC50=58nM
    BindingDB: IC50=58nM
    9683 3o99:A (1.95) BS01 K13 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.82, Ki=15pM
    9684 3o99:B (1.95) BS01 K13 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.82, Ki=15pM
    9685 3o9a:A (1.9) BS01 K14 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.70, Ki=20pM
    9686 3o9a:B (1.9) BS01 K14 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.70, Ki=20pM
    9687 3o9b:A (1.5) BS01 K2A 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=12.30, Ki=0.5pM
    9688 3o9b:B (1.5) BS01 K2A 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=12.30, Ki=0.5pM
    9689 3o9c:A (1.85) BS01 K20 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=12.05, Ki=0.9pM
    9690 3o9c:B (1.85) BS01 K20 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=12.05, Ki=0.9pM
    9691 3o9d:A (1.85) BS01 K19 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.72, Ki=19pM
    9692 3o9d:B (1.85) BS01 K19 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=10.72, Ki=19pM
    9693 3o9e:A (1.5) BS01 A60 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=11.30, Ki=5pM
    9694 3o9e:B (1.5) BS01 A60 3.1.26.13 GO:0004190 ... Q90K99 24012370 PDBbind: -logKd/Ki=11.30, Ki=5pM
    9695 3o9f:A (1.7) BS01 K2D 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.70, Ki=0.2pM
    9696 3o9f:B (1.7) BS01 K2D 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.70, Ki=0.2pM
    9697 3o9g:A (1.65) BS01 F53 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.30, Ki=0.5pM
    9698 3o9g:B (1.65) BS01 F53 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.30, Ki=0.5pM
    9699 3o9h:A (1.7) BS01 K2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.10, Ki=0.8pM
    9700 3o9h:B (1.7) BS01 K2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=12.10, Ki=0.8pM
    9701 3o9i:A (1.45) BS01 A61 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=11.82, Ki=1.5pM
    9702 3o9i:B (1.45) BS01 A61 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 24012370 PDBbind: -logKd/Ki=11.82, Ki=1.5pM
    9703 3o9l:A (2.4) BS01 LPN 3.4.23.15 GO:0004190 ... P00797 20843686 MOAD: ic50=0.22nM
    PDBbind: -logKd/Ki=9.66, IC50=0.22nM
    BindingDB: IC50=0.22nM
    9704 3o9l:B (2.4) BS01 LPN 3.4.23.15 GO:0004190 ... P00797 20843686 PDBbind: -logKd/Ki=9.66, IC50=0.22nM
    BindingDB: IC50=0.22nM
    9705 3o9p:A (2.07) BS01 MHI ? GO:0015031 ... P77348 21705338 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    9706 3o9v:A (2.75) BS01 10T 3.4.14.5 GO:0001618 ... P27487 21218817 PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    9707 3o9x:A (2.0999) BS01 dna ? GO:0003677 ... Q46864 21068382 PDBbind: Kd=0.8nM
    9708 3o9x:A (2.0999) BS02 dna ? GO:0003677 ... Q46864 21068382 PDBbind: Kd=0.8nM
    9709 3o9x:B (2.0999) BS01 dna ? GO:0003677 ... Q46864 21068382 PDBbind: Kd=0.8nM
    9710 3o9x:B (2.0999) BS02 dna ? GO:0003677 ... Q46864 21068382 PDBbind: Kd=0.8nM
    9711 3oad:A (2.17) BS01 LPO 3.4.23.15 GO:0004190 ... P00797 20843686 MOAD: ic50=0.24nM
    PDBbind: -logKd/Ki=9.62, IC50=0.24nM
    BindingDB: IC50=0.12nM
    9712 3oad:B (2.17) BS01 LPO 3.4.23.15 GO:0004190 ... P00797 20843686 PDBbind: -logKd/Ki=9.62, IC50=0.24nM
    BindingDB: IC50=0.12nM
    9713 3oaf:A (1.7) BS01 OAG 1.5.1.3 GO:0000900 ... P00374 23545530 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    BindingDB: Ki=24nM
    9714 3oag:A (2.3) BS01 LPQ 3.4.23.15 GO:0004190 ... P00797 20843686 MOAD: ic50=0.56nM
    PDBbind: -logKd/Ki=9.51, IC50=0.31nM
    9715 3oag:B (2.3) BS01 LPQ 3.4.23.15 GO:0004190 ... P00797 20843686 PDBbind: -logKd/Ki=9.51, IC50=0.31nM
    9716 3oaw:A (2.75) BS01 OAW 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 20817449 PDBbind: -logKd/Ki=8.15, Ki=7nM
    9717 3oay:H (1.95) BS01 BDF N/A N/A N/A 20852065 PDBbind: -logKd/Ki=1.70, IC50~20mM
    9718 3oc0:A (2.7) BS01 B2Q 3.4.14.5 GO:0001618 ... P27487 20031405 PDBbind: -logKd/Ki=6.28, IC50=520nM
    BindingDB: IC50=710nM
    9719 3ocb:A (2.7) BS02 XM1 2.7.11.1 GO:0004672 ... P31749 20810279 PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    9720 3ocg:A (2.21) BS01 OCG 2.7.11.24 GO:0000077 ... Q16539 21035336 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    9721 3ocp:A (2.49) BS01 CMP 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=27+-3.6nM (21526164)
    MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    9722 3oct:A (1.95) BS01 1N1 2.7.10.2 GO:0004672 ... Q06187 N/A PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: Kd=1.4nM, IC50=3.0nM
    9723 3ocz:A (1.35) BS02 SRA 3.1.3.2 GO:0009279 ... P26093 21933344 MOAD: Ki=0.035uM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    9724 3od0:A (2.9) BS01 PCG 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=12+-1.6nM (21526164)
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    9725 3od0:A (2.9) BS02 PCG 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=12+-1.6nM (21526164)
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    9726 3od0:B (2.9) BS01 PCG 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=12+-1.6nM (21526164)
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    9727 3odh:A (2.3) BS01 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9728 3odh:A (2.3) BS02 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9729 3odh:B (2.3) BS01 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9730 3odh:B (2.3) BS02 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9731 3odh:E (2.3) BS01 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9732 3odh:E (2.3) BS02 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9733 3odh:F (2.3) BS01 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9734 3odh:F (2.3) BS02 dna N/A GO:0000287 ... N/A 20833632 PDBbind: Kd=12.9nM
    9735 3odk:A (2.3) BS01 ODK 5.2.1.8 GO:0000413 ... Q13526 20932746 MOAD: ic50=720uM
    PDBbind: -logKd/Ki=3.14, IC50=720uM
    BindingDB: IC50=720000nM
    9736 3odu:A (2.5) BS01 ITD 3.2.1.17 GO:0003796 ... P00720
    P61073    		 20929726 PDBbind: -logKd/Ki=8.14, Ki=7.3nM
    9737 3oe4:A (1.49) BS02 610 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=34nM
    PDBbind: -logKd/Ki=7.47, Ki=34nM
    9738 3oe5:A (1.52) BS02 611 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=132nM
    PDBbind: -logKd/Ki=6.88, Ki=132nM
    9739 3oe6:A (3.2) BS01 ITD 3.2.1.17 GO:0003796 ... P00720
    P61073    		 20929726 PDBbind: -logKd/Ki=8.09, Ki=8.2nM
    9740 3oe9:A (3.1) BS01 ITD 3.2.1.17 GO:0003796 ... P00720
    P61073    		 20929726 PDBbind: -logKd/Ki=8.18, Ki=6.6nM
    9741 3oeu:K (2.6) BS02 OEU 3.4.25.1 GO:0004298 ... P30656 20875739 PDBbind: -logKd/Ki=7.51, IC50=31nM
    9742 3oeu:L (2.6) BS01 OEU 3.4.25.1 GO:0000502 ... P23724 20875739 PDBbind: -logKd/Ki=7.51, IC50=31nM
    9743 3oev:K (2.85) BS02 3OE 3.4.25.1 GO:0004298 ... P30656 20875739 PDBbind: -logKd/Ki=8.13, IC50=7.4nM
    9744 3oev:L (2.85) BS01 3OE 3.4.25.1 GO:0000502 ... P23724 20875739 PDBbind: -logKd/Ki=8.13, IC50=7.4nM
    9745 3of8:A (2.2) BS01 I0Y 3.4.22.15 GO:0006508 ... P07711 20850545 PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    9746 3og7:A (2.45) BS01 032 2.7.11.1 GO:0004672 ... P15056 20823850 PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: IC50=31nM, Kd=51nM, EC50=2290nM
    9747 3ogm:B (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106 PDBbind: -logKd/Ki=7.32, Kd=48nM
    9748 3ogp:A (1.7) BS01 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    9749 3ogp:A (1.7) BS02 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    9750 3ogp:B (1.7) BS01 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    9751 3ogp:B (1.7) BS02 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    9752 3ogq:A (1.8) BS01 AB1 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 MOAD: ic50=30nM
    PDBbind: -logKd/Ki=7.52, IC50=30nM
    9753 3ogq:B (1.8) BS01 AB1 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 21636894 PDBbind: -logKd/Ki=7.52, IC50=30nM
    9754 3ogu:A (1.845) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 21107011 PDBbind: Kd=9.5nM
    9755 3ogu:A (1.845) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 21107011 PDBbind: Kd=9.5nM
    9756 3ohf:A (2.1) BS01 3HF 3.4.23.46 GO:0004190 ... P56817 21078556 MOAD: ic50=94nM
    PDBbind: -logKd/Ki=7.03, IC50=94nM
    9757 3ohh:A (2.01) BS01 3HH 3.4.23.46 GO:0004190 ... P56817 21078556 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    9758 3ohi:A (2.3) BS02 HDX 4.1.2.13 GO:0004332 ... A8B2U2 21333622 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    9759 3ohi:B (2.3) BS02 HDX 4.1.2.13 GO:0004332 ... A8B2U2 21333622 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    9760 3oik:A (1.5) BS02 WZB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=6.17, Ki=680nM
    BindingDB: Ki=232nM, IC50=290nM
    9761 3oil:A (1.5) BS02 VZ5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=5.68, Ki=2100nM
    9762 3oim:A (1.45) BS02 VZ5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=6.74, Ki=180nM
    9763 3oj8:A (1.9) BS01 OJ8 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 21428410 PDBbind: -logKd/Ki=8.36, Kd=4.4nM
    9764 3ok9:A (1.27) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20827746 MOAD: Ki=5.9pM
    PDBbind: -logKd/Ki=11.23, Ki=5.9pM
    9765 3ok9:B (1.27) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 20827746 PDBbind: -logKd/Ki=11.23, Ki=5.9pM
    9766 3oka:A (2.2) BS01 GDD 2.4.1.346 GO:0008654 ... Q8NNK8 20843801 MOAD: Kd=19uM
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    9767 3okc:A (2.4) BS01 GDP 2.4.1.346 GO:0008654 ... Q8NNK8 20843801 MOAD: Kd=36.5uM
    PDBbind: -logKd/Ki=4.44, Kd=36.5uM
    9768 3okh:A (2.5) BS02 OKH ? GO:0003677 ... Q96RI1 21134747 PDBbind: -logKd/Ki=5.24, IC50=5.72uM
    BindingDB: IC50=5720nM
    9769 3okh:A (2.5) BS03 OKH ? GO:0003677 ... Q96RI1 21134747 PDBbind: -logKd/Ki=5.24, IC50=5.72uM
    BindingDB: IC50=5720nM
    9770 3oki:A (2.0) BS02 OKI ? GO:0003677 ... Q96RI1 21134747 MOAD: ic50=0.07uM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    BindingDB: IC50=70nM
    9771 3okp:A (2.0) BS01 GDD 2.4.1.346 GO:0008654 ... Q8NNK8 20843801 MOAD: Kd=19uM
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    9772 3oku:A (1.45) BS02 VZ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=6.36, Ki=440nM
    9773 3okv:A (1.45) BS02 VZ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=6.23, Ki=590nM
    9774 3okv:A (1.45) BS03 VZ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=6.23, Ki=590nM
    9775 3old:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9776 3old:A (2.0) BS02 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9777 3old:A (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9778 3old:A (2.0) BS04 G6D 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9779 3old:A (2.0) BS05 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9780 3old:A (2.0) BS06 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9781 3old:A (2.0) BS07 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9782 3old:A (2.0) BS08 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9783 3old:A (2.0) BS10 ACI 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=5.90, Ki=1254.9nM
    9784 3ole:A (1.55) BS01 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9785 3ole:A (1.55) BS02 G6D 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9786 3ole:A (1.55) BS03 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9787 3ole:A (1.55) BS04 G6D 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9788 3ole:A (1.55) BS05 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9789 3ole:A (1.55) BS06 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9790 3ole:A (1.55) BS07 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9791 3ole:A (1.55) BS08 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9792 3ole:A (1.55) BS10 ACI 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    9793 3olf:A (1.9) BS02 OLF ? GO:0003677 ... Q96RI1 21269824 PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM, EC50=500nM
    9794 3olg:A (2.3) BS01 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9795 3olg:A (2.3) BS02 G6D 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9796 3olg:A (2.3) BS03 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9797 3olg:A (2.3) BS04 G6D 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9798 3olg:A (2.3) BS05 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9799 3olg:A (2.3) BS06 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9800 3olg:A (2.3) BS07 BGC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218