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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7801 3e6y:A (2.5) BS02 CW1 ? GO:0005737 ... P93343 19244612 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    7802 3e73:A (2.8) BS02 GSH 2.5.1.18 GO:0004364 ... O43813 19528316 PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    7803 3e7b:A (1.7) BS03 E7B 3.1.3.16 GO:0016787 ... P62136 18992256 MOAD: ic50=0.16nM
    PDBbind: -logKd/Ki=9.80, IC50=0.16nM
    7804 3e7o:A (2.14) BS01 35F 2.7.11.24 GO:0004672 ... P45984 18801372 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    7805 3e81:A (1.629) BS03 SLB 3.1.3.103 GO:0016787 ... Q8A712 18986982 PDBbind: -logKd/Ki=1.43, Ki=37mM
    7806 3e81:A (1.629) BS04 SLB 3.1.3.103 GO:0016787 ... Q8A712 18986982 PDBbind: -logKd/Ki=1.43, Ki=37mM
    7807 3e81:B (1.629) BS01 SLB 3.1.3.103 GO:0016787 ... Q8A712 18986982 PDBbind: -logKd/Ki=1.43, Ki=37mM
    7808 3e81:B (1.629) BS04 SLB 3.1.3.103 GO:0016787 ... Q8A712 18986982 PDBbind: -logKd/Ki=1.43, Ki=37mM
    7809 3e85:A (1.95) BS01 BSU 3.1.27.- GO:0004518 ... Q9LLQ2 19220853 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    7810 3e85:A (1.95) BS02 BSU 3.1.27.- GO:0004518 ... Q9LLQ2 19220853 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    7811 3e85:A (1.95) BS03 BSU 3.1.27.- GO:0004518 ... Q9LLQ2 19220853 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    7812 3e85:A (1.95) BS04 BSU 3.1.27.- GO:0004518 ... Q9LLQ2 19220853 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    7813 3e8n:A (2.5) BS03 VRA 2.7.12.2 GO:0004672 ... Q02750 19706763 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    7814 3e8r:A (1.9) BS02 615 3.4.24.86 GO:0004222 ... P78536 18835710 PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    BindingDB: Ki=0.180000nM
    7815 3e90:A (2.45) BS01 NKK 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... P06935 19059417 PDBbind: -logKd/Ki=7.39, Ki=41nM
    7816 3e90:B (2.45) BS01 NKK 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P06935 19059417 PDBbind: -logKd/Ki=7.39, Ki=41nM
    7817 3e92:A (2.0) BS01 G6A 2.7.11.24 GO:0000077 ... Q16539 18789685 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=10.0nM
    7818 3e93:A (2.0) BS01 19B 2.7.11.24 GO:0000077 ... Q16539 18789685 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.4nM
    BindingDB: Ki=1.4nM
    7819 3e9b:A (2.15) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 19093830 MOAD: Ki=4500nM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    7820 3e9h:A (2.1) BS02 KAA 6.1.1.6 GO:0000049 ... Q9RHV9 19174549 PDBbind: -logKd/Ki=7.55, Ki=28nM
    7821 3e9i:A (2.2) BS01 XAH 6.1.1.6 GO:0000049 ... Q9RHV9 19174549 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    7822 3eax:A (1.9) BS01 LZP 3.1.3.48 GO:0004725 ... P18031 19012396 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    7823 3eb1:A (2.4) BS01 LZQ 3.1.3.48 GO:0004725 ... P18031 19012396 MOAD: Ki=16.3uM
    PDBbind: -logKd/Ki=4.79, Ki=16.3uM
    BindingDB: IC50=20000nM
    7824 3ebh:A (1.65) BS02 BES 3.4.11.- GO:0006508 ... O96935 19196988 MOAD: Ki=478.2nM
    PDBbind: -logKd/Ki=6.32, Ki=478.2nM
    BindingDB: Ki=190nM, IC50=284nM
    7825 3ebi:A (2.0) BS02 BEY 3.4.11.- GO:0006508 ... O96935 19196988 MOAD: Ki=79nM
    PDBbind: -logKd/Ki=7.10, Ki=79nM
    7826 3ebl:A (1.9) BS01 GA4 3.-.-.- GO:0005634 ... Q6L545 19037316 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    7827 3ebo:A (1.9) BS01 57D 2.4.1.1 GO:0000166 ... P00489 23279842 PDBbind: -logKd/Ki=4.72, Ki=19.01uM
    7828 3ebp:A (2.0) BS01 CPB 2.4.1.1 GO:0000166 ... P00489 23279842 PDBbind: -logKd/Ki=5.91, Ki=1.24uM
    BindingDB: IC50=1200nM
    7829 3ecn:A (2.1) BS01 IBM 3.1.4.53 GO:0004114 ... O60658 18983167 MOAD: ic50=698uM
    PDBbind: -logKd/Ki=3.16, IC50=698uM
    BindingDB: IC50=700000nM
    7830 3ed0:A (2.3) BS01 EMO 4.2.1.59 GO:0005737 ... Q5G940 19433000 MOAD: Kd=0.45uM
    PDBbind: -logKd/Ki=6.35, Kd=0.45uM
    7831 3ed0:B (2.3) BS01 EMO 4.2.1.59 GO:0005737 ... Q5G940 19433000 PDBbind: -logKd/Ki=6.35, Kd=0.45uM
    7832 3ee2:A (1.91) BS02 NZO 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 19939518 MOAD: ic50~65uM
    PDBbind: -logKd/Ki=4.19, IC50=65uM
    7833 3eeb:A (2.1) BS01 IHP 2.3.1.-
    3.4.22.-
    6.3.2.-
    N/A Q9KS12 18845756 MOAD: Kd=1.3uM
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    7834 3efj:A (2.6) BS01 MT3 2.7.10.1 GO:0004672 ... P08581 18763753 PDBbind: -logKd/Ki=7.41, Ki=39nM
    BindingDB: IC50=39nM, Ki=39nM
    7835 3efj:B (2.6) BS01 MT3 2.7.10.1 GO:0004672 ... P08581 18763753 PDBbind: -logKd/Ki=7.41, Ki=39nM
    BindingDB: IC50=39nM, Ki=39nM
    7836 3efk:A (2.2) BS01 MT4 2.7.10.1 GO:0004672 ... P08581 18763753 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM, IC50=14nM
    7837 3efk:B (2.2) BS01 MT4 2.7.10.1 GO:0004672 ... P08581 18763753 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM, IC50=14nM
    7838 3efr:A (2.55) BS01 BTN 6.3.4.15 GO:0004077 ... O66837 19385043 PDBbind: -logKd/Ki=5.08, Kd=8.3uM
    7839 3efs:A (2.3) BS01 ATP 6.3.4.15 GO:0004077 ... O66837 19385043 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    7840 3efs:A (2.3) BS03 ATP 6.3.4.15 GO:0004077 ... O66837 19385043 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    7841 3eft:A (1.85) BS02 3BS 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 19778001 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    7842 3efw:A (2.29) BS01 AK8 2.7.11.1 GO:0000212 ... O14965 19062275 PDBbind: -logKd/Ki=8.40, IC50=4nM
    7843 3egk:H (2.2) BS03 M18 3.4.21.5 GO:0004252 ... P00734 17955562 MOAD: Ki=22uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    7844 3egt:A (2.0) BS03 722 2.5.1.10 GO:0004161 ... Q86C09 19309137 MOAD: Ki=1.26nM
    PDBbind: -logKd/Ki=8.90, Ki=1.26nM
    7845 3egt:B (2.0) BS01 722 2.5.1.10 GO:0004161 ... Q86C09 19309137 MOAD: Ki=1.26nM
    PDBbind: -logKd/Ki=8.90, Ki=1.26nM
    7846 3egt:B (2.0) BS04 722 2.5.1.10 GO:0004161 ... Q86C09 19309137 MOAD: Ki=1.26nM
    PDBbind: -logKd/Ki=8.90, Ki=1.26nM
    7847 3egz:A (2.2) BS01 rna ? GO:0003676 ... P09012 18940672 PDBbind: Kd=0.6nM
    7848 3eh8:A (2.7) BS01 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7849 3eh8:A (2.7) BS02 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7850 3eh8:D (2.7) BS01 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7851 3eh8:D (2.7) BS02 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7852 3eh8:G (2.7) BS01 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7853 3eh8:G (2.7) BS02 dna 3.1.-.- GO:0004519 ... P03880 19103658 PDBbind: Kd=12nM
    7854 3ehw:A (1.8) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7855 3ehw:A (1.8) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7856 3ehw:A (1.8) BS03 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7857 3ehw:B (1.8) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7858 3ehw:B (1.8) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7859 3ehw:B (1.8) BS03 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7860 3ehw:C (1.8) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7861 3ehw:C (1.8) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7862 3ehw:C (1.8) BS03 DUP 3.6.1.23 GO:0000287 ... P33316 N/A PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    7863 3ehx:A (1.9) BS06 BDL 3.4.24.65 GO:0004222 ... P39900 19275207 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    7864 3ehy:A (1.9) BS06 TBL 3.4.24.65 GO:0004222 ... P39900 19275207 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    7865 3eid:A (3.15) BS01 PO5 2.7.11.22 GO:0000082 ... P24941 18835709 PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    BindingDB: IC50=450nM
    7866 3eig:A (1.7) BS01 MTX 1.5.1.3 GO:0000900 ... P00374 19478082 MOAD: Ki=21nM
    PDBbind: -logKd/Ki=7.68, Ki=21nM
    BindingDB: IC50=22nM, Kd=0.194984nM, Ki=4420nM, EC50=13.3nM
    7867 3eio:A (2.0) BS01 AJH 3.4.14.5 GO:0001618 ... P27487 18996694 MOAD: ic50=223nM
    PDBbind: -logKd/Ki=6.65, IC50=223nM
    BindingDB: IC50=223nM
    7868 3ej1:A (3.22) BS01 5BP 2.7.11.22 GO:0000082 ... P24941 18835709 PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    7869 3ej5:X (2.5) BS01 EJ5 3.2.2.22 GO:0017148 ... P02879 19138659 MOAD: ic50=0.27mM
    PDBbind: -logKd/Ki=3.57, IC50=0.27mM
    7870 3ejp:A (1.32) BS02 HN2 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: Ki=2.8nM
    PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    7871 3ejq:A (1.45) BS02 HN3 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    7872 3ejr:A (1.27) BS02 HN4 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    7873 3ejs:A (1.35) BS02 HN5 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: ic50=250nM
    PDBbind: -logKd/Ki=6.60, IC50=250nM
    7874 3ejt:A (1.35) BS02 HN6 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: ic50=44nM
    PDBbind: -logKd/Ki=7.36, IC50=44nM
    7875 3eju:A (1.32) BS02 HN7 3.2.1.114 GO:0000139 ... Q24451 20209559 MOAD: ic50=250nM
    PDBbind: -logKd/Ki=6.60, IC50=250nM
    7876 3ekn:A (2.2) BS01 GS3 2.7.10.1 GO:0004672 ... P06213 19071018 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    7877 3eko:A (1.55) BS01 PYU 3.6.4.10 GO:0005524 ... P07900 18929486 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    7878 3ekp:A (2.15) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    7879 3ekp:B (2.15) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    7880 3ekq:A (2.2) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=176nM
    PDBbind: -logKd/Ki=6.75, Kd=176.0nM
    7881 3ekq:B (2.2) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=6.75, Kd=176.0nM
    7882 3ekr:A (2.0) BS01 PY9 3.6.4.10 GO:0005524 ... P07900 18929486 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    7883 3eks:A (1.8) BS03 CY9 3.6.4.- GO:0000281 ... P10987 18938176 PDBbind: -logKd/Ki=5.70, Kd=2uM
    7884 3ekt:A (1.97) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=10.59, Kd=26pM
    7885 3ekt:B (1.97) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=0.026nM
    PDBbind: -logKd/Ki=10.59, Kd=26pM
    7886 3ekv:A (1.75) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=0.39nM
    PDBbind: -logKd/Ki=9.41, Kd=0.39nM
    7887 3ekv:B (1.75) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=9.41, Kd=0.39nM
    7888 3ekw:A (1.6) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=7.96, Kd=10.9nM
    7889 3ekw:B (1.6) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=10.9nM
    PDBbind: -logKd/Ki=7.96, Kd=10.9nM
    7890 3ekx:A (1.97) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=9.41, Kd=0.39nM
    7891 3ekx:B (1.97) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=0.39nM
    PDBbind: -logKd/Ki=9.41, Kd=0.39nM
    7892 3eky:A (1.8) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=0.23nM
    PDBbind: -logKd/Ki=9.64, Kd=0.23nM
    7893 3eky:B (1.8) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=9.64, Kd=0.23nM
    7894 3el0:A (2.0) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=34.1nM
    PDBbind: -logKd/Ki=7.47, Kd=34.1nM
    7895 3el0:B (2.0) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=7.47, Kd=34.1nM
    7896 3el1:A (1.7) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=0.23nM
    PDBbind: -logKd/Ki=9.64, Kd=0.23nM
    7897 3el1:B (1.7) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=9.64, Kd=0.23nM
    7898 3el4:A (2.0) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=67.4nM
    PDBbind: -logKd/Ki=7.17, Kd=67.4nM
    7899 3el4:B (2.0) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=7.17, Kd=67.4nM
    7900 3el5:A (1.6) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=7.72, Kd=18.9nM
    7901 3el5:B (1.6) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=18.9nM
    PDBbind: -logKd/Ki=7.72, Kd=18.9nM
    7902 3el7:A (2.8) BS01 PD3 2.7.10.2 GO:0004672 ... P00523 18940662 PDBbind: -logKd/Ki=6.32, IC50=0.48uM
    7903 3el8:A (2.3) BS01 PD5 2.7.10.2 GO:0004672 ... P00523 18940662 MOAD: ic50=25nM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    7904 3el9:A (1.6) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 MOAD: Kd=4nM
    PDBbind: -logKd/Ki=8.40, Kd=4.00nM
    7905 3el9:B (1.6) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 22712830 PDBbind: -logKd/Ki=8.40, Kd=4.00nM
    7906 3elc:A (2.5) BS02 F01 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=2.02mM
    PDBbind: -logKd/Ki=2.69, Kd=2.02mM
    BindingDB: Kd=2020000nM
    7907 3elc:A (2.5) BS03 F01 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=2.02mM
    PDBbind: -logKd/Ki=2.69, Kd=2.02mM
    BindingDB: Kd=2020000nM
    7908 3elc:C (2.5) BS02 F01 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=2.02mM
    PDBbind: -logKd/Ki=2.69, Kd=2.02mM
    BindingDB: Kd=2020000nM
    7909 3elj:A (1.8) BS01 GS7 2.7.11.24 GO:0004672 ... P45983 19071018 PDBbind: -logKd/Ki=5.30, IC50=5uM
    7910 3elm:A (1.9) BS07 24F 3.4.24.- GO:0004222 ... P45452 19422229 MOAD: Ki=0.19nM
    PDBbind: -logKd/Ki=9.72, Ki=0.19nM
    BindingDB: IC50=0.5nM, Ki=0.19nM
    7911 3elm:B (1.9) BS06 24F 3.4.24.- GO:0004222 ... P45452 19422229 MOAD: Ki=0.19nM
    PDBbind: -logKd/Ki=9.72, Ki=0.19nM
    BindingDB: IC50=0.5nM, Ki=0.19nM
    7912 3emg:A (2.6) BS01 685 2.7.10.2 GO:0004672 ... P43405 18938080 PDBbind: -logKd/Ki=8.05, Ki=9nM
    BindingDB: IC50=6.0nM, Ki=9nM
    7913 3eml:A (2.6) BS01 ZMA ?
    3.2.1.17
    GO:0003796 ... P00720
    P29274
    18832607 PDBbind: -logKd/Ki=8.74, Kd=1.8nM
    7914 3ens:B (2.3) BS01 ENS 3.4.21.6 GO:0004252 ... P00742 18998662 MOAD: ic50=8.9nM
    PDBbind: -logKd/Ki=8.05, IC50=8.9nM
    7915 3eoc:A (3.2) BS01 T2A 2.7.11.22 GO:0000082 ... P24941 18929484 PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    7916 3eor:A (2.9) BS02 CFV 4.6.1.12 GO:0005515 ... P62617 19320487 PDBbind: -logKd/Ki=1.40, Kd=40mM
    7917 3eos:A (1.78) BS02 PK2 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    7918 3eou:A (1.93) BS02 PK3 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=97nM
    PDBbind: -logKd/Ki=7.01, Ki=97nM
    7919 3eq7:A (2.89) BS01 X99 3.4.21.26 GO:0004252 ... P23687 19006380 PDBbind: -logKd/Ki=9.09, IC50=0.81nM
    7920 3eq8:A (2.73) BS01 X98 3.4.21.26 GO:0004252 ... P23687 19006380 PDBbind: -logKd/Ki=9.06, IC50=0.88nM
    7921 3eq9:A (2.47) BS01 X97 3.4.21.26 GO:0004252 ... P23687 19006380 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    7922 3eqb:A (2.62) BS03 LUG 2.7.12.2 GO:0004672 ... Q02750 18951019 PDBbind: -logKd/Ki=1.82, IC50=15mM
    7923 3eql:C (2.7) BS01 MXP 2.7.7.6 GO:0000428 ... Q8RQE9 18946472 PDBbind: -logKd/Ki=5.30, IC50=4.99uM
    7924 3eql:D (2.7) BS03 MXP 2.7.7.6 GO:0000287 ... Q8RQE8 18946472 PDBbind: -logKd/Ki=5.30, IC50=4.99uM
    7925 3eqr:A (2.0) BS01 T74 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q07912 18993068 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: IC50=20nM, Ki=2nM
    7926 3eqt:A (2.0) BS01 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    7927 3eqt:A (2.0) BS02 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    7928 3eqt:B (2.0) BS01 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    7929 3eqt:B (2.0) BS02 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    7930 3er3:E (2.0) BS01 0EL 3.4.23.22 GO:0004190 ... P11838 6381096 MOAD: Ki=81nM
    PDBbind: -logKd/Ki=7.09, Ki=81nM
    7931 3erd:A (2.03) BS02 DES ? N/A P03372 9875847 PDBbind: -logKd/Ki=9.90, Ki=0.126nM
    BindingDB: Ki=0.128000nM, IC50=0.330000nM, EC50=0.110000nM
    7932 3erk:A (2.1) BS01 SB4 2.7.11.24 GO:0000165 ... P63086 9753691 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    BindingDB: IC50=18000nM
    7933 3ern:A (2.1) BS02 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    PDBbind: -logKd/Ki=1.72, Kd=18.91mM
    BindingDB: Kd=18910000nM
    7934 3ern:C (2.1) BS02 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    PDBbind: -logKd/Ki=1.72, Kd=18.91mM
    BindingDB: Kd=18910000nM
    7935 3ert:A (1.9) BS01 OHT ? N/A P03372 9875847 PDBbind: -logKd/Ki=9.60, Ki=0.249nM
    BindingDB: IC50=0.790000nM, EC50=10.3nM, Ki=5.7nM
    7936 3esj:A (2.7) BS02 CC7 4.6.1.12 GO:0005515 ... P62617 19320487 PDBbind: -logKd/Ki=3.03, Kd=0.925mM
    7937 3ess:A (1.191) BS01 18N 2.4.2.36 GO:0047286 ... Q5EK40 19793133 MOAD: ic50=411nM
    PDBbind: -logKd/Ki=6.39, IC50=411nM
    7938 3et7:A (2.7) BS01 349 2.7.10.2 GO:0004672 ... Q14289 18951788 PDBbind: -logKd/Ki=7.77, IC50=17nM
    7939 3eta:A (2.6) BS01 351 2.7.10.1 GO:0004672 ... P06213 19394223 PDBbind: -logKd/Ki=7.85, IC50=14nM
    7940 3eu5:A (2.8) BS01 GBO 2.5.1.58
    2.5.1.59
    GO:0004659 ... Q04631 19219049 PDBbind: -logKd/Ki=7.49, Kd=32nM
    7941 3eu5:B (2.8) BS02 GBO 2.5.1.58 GO:0003824 ... Q02293 19219049 PDBbind: -logKd/Ki=7.49, Kd=32nM
    7942 3evc:A (1.6) BS02 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    7943 3evd:A (1.5) BS01 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    7944 3evd:A (1.5) BS02 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    7945 3evf:A (1.45) BS01 GTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.77, Ki=170nM
    7946 3evf:A (1.45) BS02 GTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.77, Ki=170nM
    7947 3ew2:A (2.3) BS01 BTN ? GO:0005576 ... Q8KKW2 19111749 PDBbind: -logKd/Ki=6.67, Kd=215nM
    7948 3ew2:B (2.3) BS01 BTN ? GO:0005576 ... Q8KKW2 19111749 PDBbind: -logKd/Ki=6.67, Kd=215nM
    7949 3ewc:A (2.11) BS02 MCF 3.5.4.31
    3.5.4.4
    GO:0004000 ... A5KE01 19728741 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    7950 3ewh:A (1.6) BS01 K11 2.7.10.1 GO:0004672 ... P35968 19062275 MOAD: ic50=69nM
    PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=70nM
    7951 3ewu:A (1.6) BS01 UEP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    7952 3ewu:A (1.6) BS02 UEP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    7953 3ewu:B (1.6) BS01 UEP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    7954 3ewu:B (1.6) BS02 UEP 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    7955 3ewz:A (1.4) BS01 CNU 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.10, IC50=79uM
    7956 3ewz:A (1.4) BS02 CNU 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.10, IC50=79uM
    7957 3ewz:B (1.4) BS01 CNU 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50=79uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    7958 3ewz:B (1.4) BS02 CNU 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50=79uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    7959 3ex2:A (1.55) BS01 6CN 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    7960 3ex2:A (1.55) BS02 6CN 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    7961 3ex2:B (1.55) BS01 6CN 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    7962 3ex2:B (1.55) BS02 6CN 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    7963 3ex3:A (1.45) BS01 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    7964 3ex3:A (1.45) BS02 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    7965 3ex3:B (1.45) BS01 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    7966 3ex3:B (1.45) BS02 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    7967 3ex6:A (1.3) BS01 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=3.66, Ki=220uM
    7968 3ex6:B (1.3) BS01 U5P 2.4.2.10
    4.1.1.23
    GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=3.66, Ki=220uM
    7969 3exf:A (2.998) BS02 TPP 1.2.4.1 GO:0004738 ... P08559 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    7970 3exf:B (2.998) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    7971 3exf:D (2.998) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    7972 3exh:A (2.444) BS02 TPP 1.2.4.1 GO:0004738 ... P08559 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    7973 3exh:B (2.444) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    7974 3exh:D (2.444) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    7975 3exo:A (2.1) BS01 5MS 3.4.23.46 GO:0004190 ... P56817 19036583 MOAD: ic50=24uM
    PDBbind: -logKd/Ki=4.62, IC50=24uM
    BindingDB: IC50=24000nM
    7976 3eyd:A (2.3) BS04 BE8 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 19022670 PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    7977 3eyg:A (1.9) BS01 MI1 2.7.10.2 GO:0004672 ... P23458 19361440 MOAD: ic50=1.6nM
    PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=15nM, EC50=53nM, Kd=>10000nM, Ki=0.700000nM
    7978 3eyh:A (2.0) BS01 IZA 2.7.10.2 GO:0004672 ... P23458 19361440 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=5.2nM
    7979 3eyl:A (3.0) BS02 SMK 2.3.2.27 N/A P98170 18992220 PDBbind: -logKd/Ki=6.60, IC50=250nM
    BindingDB: IC50=86nM
    7980 3ezr:A (1.9) BS01 EZR 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=10000nM
    7981 3ezr:A (1.9) BS02 EZR 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=10000nM
    7982 3ezv:A (1.99) BS01 EZV 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.98, IC50=1.04uM
    7983 3f07:A (3.3) BS03 AGE 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    7984 3f0r:A (2.54) BS02 TSN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=6.89, Ki=130nM
    BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    7985 3f0r:A (2.54) BS03 TSN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=6.89, Ki=130nM
    BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    7986 3f15:A (1.7) BS06 HS1 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=7.88nM
    PDBbind: -logKd/Ki=8.10, Kd=7.88nM
    7987 3f16:A (1.16) BS06 HS3 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=5.91nM
    PDBbind: -logKd/Ki=8.23, Kd=5.91nM
    7988 3f17:A (1.1) BS06 HS4 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=2.36nM
    PDBbind: -logKd/Ki=8.63, Kd=2.36nM
    BindingDB: Ki=2.0nM
    7989 3f18:A (1.13) BS06 HS5 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=39.5nM
    PDBbind: -logKd/Ki=7.40, Kd=39.5nM
    7990 3f19:A (1.13) BS06 HS6 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=65.1nM
    PDBbind: -logKd/Ki=7.19, Kd=65.1nM
    7991 3f1a:A (1.25) BS06 HS7 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=61.1nM
    PDBbind: -logKd/Ki=7.21, Kd=61.1nM
    7992 3f27:D (2.75) BS01 dna ? N/A Q61473 19328208 PDBbind: Kd=2.6nM
    7993 3f27:D (2.75) BS02 dna ? N/A Q61473 19328208 PDBbind: Kd=2.6nM
    7994 3f2a:A (1.9) BS01 985 2.7.11.1 GO:0004672 ... P11309 19256503 MOAD: ic50=57nM
    PDBbind: -logKd/Ki=7.24, IC50=57nM
    BindingDB: IC50=57nM
    7995 3f33:A (1.7) BS01 PFL ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.46mM
    PDBbind: -logKd/Ki=3.34, Kd=0.46mM
    7996 3f34:A (1.68) BS01 DIE ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.69mM
    PDBbind: -logKd/Ki=3.16, Kd=0.69mM
    7997 3f35:A (1.92) BS01 DIE ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.69mM
    PDBbind: -logKd/Ki=3.16, Kd=0.69mM
    7998 3f36:A (1.7) BS01 IP0 ? GO:0005506 ... P02791 19605349 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.3mM
    7999 3f37:A (1.54) BS01 2MY ? GO:0005506 ... P02791 19605349 MOAD: Kd=2.4mM
    PDBbind: -logKd/Ki=2.62, Kd=2.4mM
    8000 3f38:A (1.75) BS01 2MY ? GO:0005506 ... P02791 19605349 MOAD: Kd=2.4mM
    PDBbind: -logKd/Ki=2.62, Kd=2.4mM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417