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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 1f4f:B (2.0) BS01 TP3 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=24uM
    PDBbind: -logKd/Ki=4.62, Ki=24uM
    602 1f4g:A (1.75) BS01 TP4 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=6.48, Ki=330nM
    603 1f4g:B (1.75) BS01 TP4 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=6.48, Ki=330nM
    604 1f4k:A (2.5) BS01 dna ? GO:0003677 ... P0CI76 11224562 PDBbind: Kd=20pM
    605 1f4k:A (2.5) BS02 dna ? GO:0003677 ... P0CI76 11224562 PDBbind: Kd=20pM
    606 1f4k:B (2.5) BS01 dna ? GO:0003677 ... P0CI76 11224562 PDBbind: Kd=20pM
    607 1f4k:B (2.5) BS02 dna ? GO:0003677 ... P0CI76 11224562 PDBbind: Kd=20pM
    608 1f4x:H (2.3) BS01 MGS N/A N/A N/A 10880560 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    609 1f57:A (1.75) BS02 DCY 3.4.17.1 GO:0004181 ... P00730 10955996 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    BindingDB: Ki=2300nM
    610 1f5l:A (2.1) BS01 AMR 3.4.21.73 GO:0004252 ... P00749 10926521 MOAD: Ki=5.3uM
    PDBbind: -logKd/Ki=5.28, Ki=5.3uM
    BindingDB: IC50=7000nM, Ki=7000nM
    611 1f5t:A (3.0) BS01 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    612 1f5t:A (3.0) BS02 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    613 1f5t:B (3.0) BS01 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    614 1f5t:B (3.0) BS02 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    615 1f5t:C (3.0) BS01 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    616 1f5t:C (3.0) BS02 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    617 1f5t:D (3.0) BS01 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    618 1f5t:D (3.0) BS02 dna ? GO:0003677 ... P0DJL7 10956029 PDBbind: Kd=460nM
    619 1f6u:A (-1.00) BS01 rna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P35963 10926523 PDBbind: Kd=110nM
    620 1f73:A (1.95) BS01 HMN 4.1.3.3 GO:0005737 ... P44539 11031117 MOAD: Ki=4.1mM
    PDBbind: -logKd/Ki=2.39, Ki=4.1mM
    621 1f73:C (1.95) BS01 HMN 4.1.3.3 GO:0005737 ... P44539 11031117 MOAD: Ki=4.1mM
    PDBbind: -logKd/Ki=2.39, Ki=4.1mM
    622 1f73:D (1.95) BS01 HMN 4.1.3.3 GO:0005737 ... P44539 11031117 MOAD: Ki=4.1mM
    PDBbind: -logKd/Ki=2.39, Ki=4.1mM
    623 1f74:A (1.6) BS01 NAY 4.1.3.3 GO:0005737 ... P44539 11031117 MOAD: Ki=0.9mM
    PDBbind: -logKd/Ki=3.05, Ki=0.9mM
    624 1f74:C (1.6) BS01 NAY 4.1.3.3 GO:0005737 ... P44539 11031117 MOAD: Ki=0.9mM
    PDBbind: -logKd/Ki=3.05, Ki=0.9mM
    625 1f7b:C (1.8) BS01 NAV 4.1.3.3 GO:0005737 ... P44539 11031117 PDBbind: -logKd/Ki=4.60, Ki=0.025mM
    626 1f8b:A (1.8) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 11274459 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    BindingDB: IC50=13000nM
    627 1f8c:A (1.7) BS02 4AM 3.2.1.18 GO:0004308 ... P03472 11274459 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    628 1f8d:A (1.4) BS02 9AM 3.2.1.18 GO:0004308 ... P03472 11274459 MOAD: Ki=400uM
    PDBbind: -logKd/Ki=3.40, Ki=400uM
    629 1f8e:A (1.4) BS02 49A 3.2.1.18 GO:0004308 ... P03472 11274459 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    630 1f92:A (2.6) BS01 UKP 3.4.21.73 GO:0004252 ... P00749 10926521 PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    BindingDB: Ki=640nM
    631 1f9g:A (2.0) BS01 ASC 4.2.2.1 GO:0003824 ... Q54873 11278838 MOAD: Ki=53mM
    PDBbind: -logKd/Ki=1.28, Ki=53mM
    632 1fao:A (1.8) BS01 4IP ? N/A Q9UN19 10983984 MOAD: Kd=0.043uM
    PDBbind: -logKd/Ki=7.37, Kd=0.043uM
    633 1fax:A (3.0) BS02 DX9 3.4.21.6 GO:0004252 ... P00742 8939944 PDBbind: -logKd/Ki=7.39, Ki=41nM
    BindingDB: Ki=41nM, IC50=70nM
    634 1fbm:A (2.7) BS01 RTL ? N/A P35444 9736606 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    635 1fbm:B (2.7) BS01 RTL ? N/A P35444 9736606 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    636 1fbm:D (2.7) BS01 RTL ? N/A P35444 9736606 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    637 1fbm:E (2.7) BS01 RTL ? N/A P35444 9736606 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    638 1fcx:A (1.47) BS01 184 ? GO:0003677 ... P13631 10964567 MOAD: Kd=64nM
    PDBbind: -logKd/Ki=7.19, Kd=64nM
    BindingDB: Kd=64nM
    639 1fcy:A (1.3) BS01 564 ? GO:0003677 ... P13631 10964567 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    BindingDB: Kd=3nM
    640 1fcz:A (1.38) BS01 156 ? GO:0003677 ... P13631 10964567 MOAD: Kd=0.6nM
    PDBbind: -logKd/Ki=9.22, Kd=0.6nM
    641 1fd0:A (1.38) BS01 254 ? GO:0003677 ... P13631 12220491 MOAD: Kd~4nM
    PDBbind: -logKd/Ki=8.40, Kd=4nM
    642 1fd7:D (1.8) BS01 AI1 ? GO:0005576 ... P32890 11173465 MOAD: ic50=14mM
    PDBbind: -logKd/Ki=1.85, IC50=14mM
    643 1fd7:E (1.8) BS01 AI1 ? GO:0005576 ... P32890 11173465 MOAD: ic50=14mM
    PDBbind: -logKd/Ki=1.85, IC50=14mM
    644 1fdq:A (2.1) BS01 HXA ? GO:0005504 ... O15540 10854433 MOAD: Kd=53.4nM
    PDBbind: -logKd/Ki=7.27, Kd=53.4nM
    645 1fe3:A (2.8) BS01 OLA ? GO:0005504 ... O15540 10854433 PDBbind: -logKd/Ki=7.33, Kd=46.7nM
    646 1fgi:A (2.5) BS01 SU1 2.7.10.1 GO:0004672 ... P11362 9139660 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=30nM
    647 1fh7:A (1.82) BS01 XYP 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=5.24, Ki=5.8uM
    648 1fh7:A (1.82) BS02 XDN 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=5.24, Ki=5.8uM
    649 1fh8:A (1.95) BS01 XYP 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    650 1fh8:A (1.95) BS02 XIF 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    651 1fh9:A (1.72) BS01 LOX 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    652 1fh9:A (1.72) BS02 XYP 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    653 1fhd:A (1.9) BS01 XYP 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    654 1fhd:A (1.9) BS02 XIM 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 10995222 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    655 1fig:H (3.0) BS01 TSA N/A N/A N/A 8303271 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    656 1fj4:A (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=12000nM
    657 1fj4:B (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=12000nM
    658 1fje:B (-1.00) BS01 rna ? GO:0003676 ... P08199 11118222 PDBbind: Kd=2nM
    659 1fjs:A (1.92) BS02 Z34 3.4.21.6 GO:0004252 ... P00742 11027132 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    BindingDB: Ki=0.11nM
    660 1fjx:A (2.26) BS01 dna 2.1.1.37 GO:0003677 ... P05102 11102456 PDBbind: Kd=1.4nM
    661 1fjx:A (2.26) BS02 dna 2.1.1.37 GO:0003677 ... P05102 11102456 PDBbind: Kd=1.4nM
    662 1fkb:A (1.7) BS01 RAP 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    663 1fkf:A (1.7) BS01 FK5 5.2.1.8 GO:0000413 ... P62942 1709302 MOAD: Kd=0.4nM
    PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=0.200000nM, EC50=0.900000nM, Ki=0.40nM, IC50=2.3nM
    664 1fkg:A (2.0) BS01 SB3 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=17nM
    665 1fkh:A (1.95) BS01 SBX 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    666 1fki:A (2.2) BS01 SB1 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Ki=100nM
    PDBbind: -logKd/Ki=7.00, Ki=100nM
    667 1fkw:A (2.4) BS02 PUR 3.5.4.4 GO:0000255 ... P03958 8672487 MOAD: Ki=9uM
    PDBbind: -logKd/Ki=5.05, Ki=9uM
    668 1fl3:H (2.45) BS01 SPB ? N/A P01867 11030644 PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    669 1fl3:L (2.45) BS01 SPB ? GO:0005576 ... P01837 11030644 MOAD: Kd=0.16uM
    PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    670 1fl6:H (2.8) BS01 AAH N/A N/A N/A 11535051 PDBbind: -logKd/Ki=7.43, Kd=37nM
    671 1fl6:L (2.8) BS01 AAH N/A N/A N/A 11535051 PDBbind: -logKd/Ki=7.43, Kd=37nM
    672 1flm:A (1.3) BS01 FMN ? GO:0005737 ... Q46604 10713530 MOAD: Kd=0.43nM
    PDBbind: -logKd/Ki=9.37, Kd=0.43nM
    673 1flm:A (1.3) BS02 FMN ? GO:0005737 ... Q46604 10713530 MOAD: Kd=0.43nM
    PDBbind: -logKd/Ki=9.37, Kd=0.43nM
    674 1flm:B (1.3) BS01 FMN ? GO:0005737 ... Q46604 10713530 MOAD: Kd=0.43nM
    PDBbind: -logKd/Ki=9.37, Kd=0.43nM
    675 1flm:B (1.3) BS02 FMN ? GO:0005737 ... Q46604 10713530 MOAD: Kd=0.43nM
    PDBbind: -logKd/Ki=9.37, Kd=0.43nM
    676 1flr:H (1.85) BS01 FLU ? N/A P01865 8637844 PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    677 1flr:L (1.85) BS01 FLU N/A N/A N/A 8637844 MOAD: Kd=0.1nM
    PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    678 1fls:A (-1.00) BS04 WAY 3.4.24.- GO:0004222 ... P45452 10986126 PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=8nM
    679 1fm9:D (2.1) BS02 570 ? GO:0003677 ... P37231 10882139 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=1.1nM, EC50=0.338844nM, IC50=25nM
    680 1fmb:A (1.8) BS01 HYB 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-    		 GO:0004190 ... P32542 8844837 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.1nM
    681 1fo2:A (2.38) BS01 DMJ 3.2.1.113 GO:0004571 ... Q9UKM7 10995765 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    682 1fo3:A (1.75) BS01 KIF 3.2.1.113 GO:0004571 ... Q9UKM7 10995765 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    683 1fpc:H (2.3) BS03 0ZI 3.4.21.5 GO:0004252 ... P00734 15299843 MOAD: Ki=0.1uM
    PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    684 1fpi:A (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    BindingDB: IC50=1300nM
    685 1fpp:B (2.75) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 9609683 PDBbind: -logKd/Ki=8.00, Kd=10nM
    686 1fpy:A (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256 PDBbind: -logKd/Ki=6.00, Ki=1uM
    687 1fpy:B (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256 PDBbind: -logKd/Ki=6.00, Ki=1uM
    688 1fq4:A (2.7) BS02 2Y2 3.4.23.25 GO:0000324 ... P07267 11061973 PDBbind: -logKd/Ki=6.40, Ki=398.0nM
    689 1fq5:A (2.4) BS01 0GM 3.4.23.25 GO:0000324 ... P07267 11061973 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4.0nM
    690 1fq6:A (2.7) BS01 0QF 3.4.23.25 GO:0000324 ... P07267 11061973 PDBbind: -logKd/Ki=7.86, Ki=13.7nM
    691 1fq7:A (2.8) BS02 2Y3 3.4.23.25 GO:0000324 ... P07267 11061973 PDBbind: -logKd/Ki=5.43, Ki=3.74uM
    692 1fq8:A (2.8) BS01 2Y4 3.4.23.25 GO:0000324 ... P07267 11061973 PDBbind: -logKd/Ki=6.03, Ki=0.94uM
    693 1fsg:A (1.05) BS02 9DG 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 11188695 MOAD: ic50=9.5uM
    PDBbind: -logKd/Ki=5.02, IC50=9.5uM
    694 1fsw:A (1.9) BS01 CTB 3.5.2.6 GO:0008800 ... P00811 11182316 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    BindingDB: Ki=3.2e+2nM
    695 1fsy:A (1.75) BS01 105 3.5.2.6 GO:0008800 ... P00811 11182316 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    BindingDB: Ki=150nM
    696 1ft4:A (2.9) BS01 703 ? GO:0005031 ... P19438 11592999 PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    697 1ft7:A (2.2) BS03 PLU 3.4.11.10 GO:0006508 ... Q01693 11401547 MOAD: Ki=6.6uM
    PDBbind: -logKd/Ki=5.18, Ki=6.6uM
    698 1fta:A (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 PDBbind: -logKd/Ki=6.36, IC50=0.44uM
    BindingDB: IC50=3200nM
    699 1fta:C (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 PDBbind: -logKd/Ki=6.36, IC50=0.44uM
    BindingDB: IC50=3200nM
    700 1ftj:A (1.9) BS02 GLU ? GO:0015276 ... P19491 11086992 MOAD: ic50=821nM
    PDBbind: -logKd/Ki=6.09, IC50=821nM
    701 1ftk:A (1.6) BS01 KAI ? GO:0015276 ... P19491 11086992 MOAD: ic50=14.5uM
    PDBbind: -logKd/Ki=4.84, IC50=14.5uM
    BindingDB: EC50=380000nM, Ki=3690nM
    702 1ftm:A (1.7) BS02 AMQ ? GO:0015276 ... P19491 11086992 MOAD: Kd=24.8nM
    PDBbind: -logKd/Ki=7.61, Kd=24.8nM
    BindingDB: Ki=17nM
    703 1fv0:A (1.7) BS01 9AR 3.1.1.4 GO:0004623 ... P59071 12206661 MOAD: Ki=1.18uM
    PDBbind: -logKd/Ki=5.93, Ki=1.18uM
    704 1fv9:A (3.0) BS01 172 3.4.21.73 GO:0004252 ... P00749 11052791 PDBbind: -logKd/Ki=5.00, IC50=10uM
    705 1fvt:A (2.2) BS01 106 2.7.11.22 GO:0000082 ... P24941 11141566 PDBbind: -logKd/Ki=7.22, IC50=60nM
    BindingDB: IC50=60nM
    706 1fvv:A (2.8) BS01 107 2.7.11.22 GO:0000082 ... P24941 11141566 PDBbind: -logKd/Ki=8.00, IC50=10nM
    707 1fw0:A (1.9) BS01 KAI ? GO:0015276 ... P19491 11086992 PDBbind: -logKd/Ki=5.43, Ki=3690nM
    BindingDB: EC50=380000nM, Ki=3690nM
    708 1fwe:C (2.0) BS03 HAE 3.5.1.5 GO:0005515 ... P18314 9201965 PDBbind: -logKd/Ki=5.60, Ki=2.5uM
    709 1fwu:A (1.9) BS01 SGA ? N/A Q61830 11152606 PDBbind: -logKd/Ki=3.70, Kd=0.20mM
    710 1fwv:A (2.2) BS01 SGA ? N/A Q61830 11152606 PDBbind: -logKd/Ki=3.72, Kd=0.19mM
    711 1fzq:A (1.7) BS01 GDP ? GO:0000139 ... Q9WUL7 11188688 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    712 1g05:B (2.45) BS06 BBH 3.4.24.17 GO:0004222 ... P08254 11327577 MOAD: ic50=3.1nM
    PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    BindingDB: IC50=3.1nM
    713 1g1d:A (2.04) BS02 FSB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=0.36nM
    PDBbind: -logKd/Ki=9.44, Kd=0.36nM
    714 1g27:A (2.1) BS01 BB1 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    715 1g2a:A (1.75) BS01 BB2 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    716 1g2k:A (1.95) BS01 NM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 11170625 PDBbind: -logKd/Ki=7.96, Ki=11nM
    717 1g2k:B (1.95) BS01 NM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 11170625 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    718 1g2l:A (1.9) BS02 T87 3.4.21.6 GO:0004252 ... P00742 11342132 MOAD: Ki=57nM
    PDBbind: -logKd/Ki=7.24, Ki=57nM
    BindingDB: Ki=57nM
    719 1g2m:A (3.02) BS02 R11 3.4.21.6 GO:0004252 ... P00742 11342132 PDBbind: -logKd/Ki=7.40, Ki=40nM
    BindingDB: Ki=40nM
    720 1g2o:A (1.75) BS02 IMH 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Ki=28pM
    PDBbind: -logKd/Ki=10.55, Ki=28pM
    721 1g2o:B (1.75) BS02 IMH 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Ki=28pM
    PDBbind: -logKd/Ki=10.55, Ki=28pM
    722 1g30:B (2.0) BS03 T87 3.4.21.5 GO:0004252 ... P00734 11342132 MOAD: Ki=140nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    BindingDB: Ki=140nM
    723 1g32:B (1.9) BS03 R11 3.4.21.5 GO:0004252 ... P00734 11342132 MOAD: Ki=780nM
    PDBbind: -logKd/Ki=6.11, Ki=780nM
    BindingDB: Ki=780nM
    724 1g35:A (1.8) BS01 AHF 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 11170625 PDBbind: -logKd/Ki=8.14, Ki=7.3nM
    725 1g35:B (1.8) BS01 AHF 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 11170625 MOAD: Ki=7.3nM
    PDBbind: -logKd/Ki=8.14, Ki=7.3nM
    726 1g36:A (1.9) BS02 R11 3.4.21.4 GO:0004175 ... P00760 11342132 MOAD: Ki=67nM
    PDBbind: -logKd/Ki=7.17, Ki=67nM
    BindingDB: Ki=67nM
    727 1g37:A (2.0) BS02 110 3.4.21.5 GO:0004252 ... P00734 11212093 PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    728 1g3b:A (1.8) BS02 108 3.4.21.4 GO:0004175 ... P00760 11152605 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    729 1g3c:A (1.8) BS02 109 3.4.21.4 GO:0004175 ... P00760 11152605 PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    730 1g3c:A (1.8) BS03 109 3.4.21.4 GO:0004175 ... P00760 11152605 PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    731 1g3d:A (1.8) BS02 108 3.4.21.4 GO:0004175 ... P00760 11152605 MOAD: Ki=2.8uM
    PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    732 1g3e:A (1.8) BS02 109 3.4.21.4 GO:0004175 ... P00760 11152605 MOAD: Ki=4.2uM
    PDBbind: -logKd/Ki=5.38, Ki=4.2uM
    733 1g3m:B (1.7) BS02 PCQ 2.8.2.4 GO:0004062 ... P49888 12782487 MOAD: ic50~0.15nM
    PDBbind: -logKd/Ki=10.00, IC50=0.10nM
    734 1g45:A (1.83) BS02 FSB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    735 1g46:A (1.84) BS02 F2B 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=1.6nM
    PDBbind: -logKd/Ki=8.80, Kd=1.6nM
    736 1g48:A (1.86) BS02 F6B 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    737 1g49:B (1.9) BS06 111 3.4.24.17 GO:0004222 ... P08254 11150165 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    738 1g4j:A (1.84) BS02 FFB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    739 1g4j:A (1.84) BS03 FFB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    740 1g4k:A (2.0) BS06 HQQ 3.4.24.17 GO:0004222 ... P08254 11316871 PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    BindingDB: IC50=2000nM
    741 1g4o:A (1.96) BS02 BSB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=5.6nM
    PDBbind: -logKd/Ki=8.25, Kd=5.6nM
    BindingDB: Kd=1.1nM
    742 1g50:A (2.9) BS01 EST ? N/A P03372 11437591 PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    743 1g52:A (1.8) BS02 F2B 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=0.29nM
    PDBbind: -logKd/Ki=9.54, Kd=0.29nM
    744 1g53:A (1.94) BS02 F6B 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=0.91nM
    PDBbind: -logKd/Ki=9.04, Kd=0.91nM
    745 1g54:A (1.86) BS02 FFB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=1.5nM
    PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    746 1g59:A (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 11224561 PDBbind: Kd=4.7uM
    747 1g59:C (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 11224561 PDBbind: Kd=4.7uM
    748 1g5s:A (2.61) BS01 I17 2.7.11.22 GO:0000082 ... P24941 11170642 PDBbind: -logKd/Ki=7.32, IC50=48nM
    BindingDB: IC50=48nM
    749 1g6s:A (1.5) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 11171958 PDBbind: -logKd/Ki=5.15, Kd=7uM
    BindingDB: Kd=7000nM
    750 1g74:A (1.7) BS01 OLA ? GO:0005324 ... P04117 14594993 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.30uM
    751 1g7f:A (1.8) BS01 INZ 3.1.3.48 GO:0004725 ... P18031 11341829 MOAD: Ki=3.4uM
    PDBbind: -logKd/Ki=5.47, Ki=3.4uM
    752 1g7g:A (2.2) BS01 INX 3.1.3.48 GO:0004725 ... P18031 11341829 MOAD: Ki=0.25uM
    PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    753 1g7v:A (2.4) BS01 PAI 2.5.1.55 GO:0005737 ... P0A715 11371194 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    754 1g85:A (1.8) BS01 3OL ? GO:0005549 ... P07435 11114310 MOAD: Kd=3.3uM
    PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    755 1g85:A (1.8) BS02 3OL ? GO:0005549 ... P07435 11114310 MOAD: Kd=3.3uM
    PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    756 1g85:B (1.8) BS01 3OL ? GO:0005549 ... P07435 11114310 MOAD: Kd=3.3uM
    PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    757 1g98:A (1.9) BS01 PA5 5.3.1.9 GO:0004347 ... Q9N1E2 11327814 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    758 1g98:B (1.9) BS01 PA5 5.3.1.9 GO:0004347 ... Q9N1E2 11327814 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    759 1g9a:A (2.1) BS02 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    760 1g9a:A (2.1) BS03 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    761 1g9b:A (2.0) BS02 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    762 1g9b:A (2.0) BS03 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    763 1g9c:A (2.35) BS02 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    764 1g9c:A (2.35) BS03 BAB 3.4.24.69 GO:0004222 ... P10844 12146945 MOAD: ic50~7.5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    765 1g9r:A (2.0) BS02 UPF 2.4.1.- GO:0016740 ... Q93EK7 11175908 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    766 1g9s:A (2.8) BS01 IMP 2.4.2.8 GO:0000166 ... P0A9M2 12070315 PDBbind: -logKd/Ki=3.61, Ki=247uM
    767 1g9t:A (2.8) BS01 5GP 2.4.2.8 GO:0000166 ... P0A9M2 12070315 PDBbind: -logKd/Ki=3.28, Ki=526uM
    768 1ga9:A (2.1) BS01 ETP 3.5.2.6 GO:0008800 ... P00811 11410378 PDBbind: -logKd/Ki=7.08, Ki=83nM
    BindingDB: Ki=80nM
    769 1gaf:H (1.95) BS01 NPE ? N/A P01857 8599084 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    770 1gaf:L (1.95) BS01 NPE ? GO:0002250 ... P01834 8599084 PDBbind: -logKd/Ki=8.00, Kd=10nM
    771 1gar:A (1.96) BS01 U89 2.1.2.2 GO:0003824 ... P08179 7776369 MOAD: Ki=100pM
    PDBbind: -logKd/Ki=10.00, Ki=100pM
    772 1gbt:A (2.0) BS02 GBS 3.4.21.4 GO:0004175 ... P00760 2252895 PDBbind: -logKd/Ki=2.00, Ki=10mM
    773 1gca:A (1.7) BS01 GAL ? GO:0006935 ... P23905 8240551 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    774 1gcz:A (1.9) BS01 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    775 1gcz:A (1.9) BS02 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    776 1gcz:C (1.9) BS01 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    777 1gcz:C (1.9) BS02 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    778 1gfw:A (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    779 1gfw:B (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    780 1gfy:A (2.13) BS01 COL 3.1.3.48 GO:0004725 ... P18031 10748206 PDBbind: -logKd/Ki=5.08, Ki=8.32uM
    BindingDB: Ki=8317.64nM
    781 1gfz:A (2.3) BS03 CFF 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: Ki~0.15mM
    PDBbind: -logKd/Ki=4.00, Ki=0.1mM
    BindingDB: IC50=114000nM
    782 1ggd:B (1.5) BS02 FAF 3.4.21.1 GO:0004252 ... P00766 11327865 PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    783 1ggd:C (1.5) BS02 FAF 3.4.21.1 GO:0004252 ... P00766 11327865 PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    784 1ggn:A (2.36) BS01 GLS 2.4.1.1 GO:0000166 ... P00489 11741774 MOAD: Ki=3.1uM
    PDBbind: -logKd/Ki=5.51, Ki=3.1uM
    BindingDB: Ki=3100nM, IC50=3100nM
    785 1ghv:H (1.85) BS02 120 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=45uM
    PDBbind: -logKd/Ki=4.35, Ki=45uM
    786 1ghw:H (1.75) BS02 BMZ 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=4.20, Ki=63uM
    787 1ghy:H (1.85) BS03 121 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=0.008uM
    PDBbind: -logKd/Ki=8.10, Ki=0.008uM
    788 1ghz:A (1.39) BS03 120 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=16uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    789 1gi1:A (1.42) BS02 BMZ 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=3.6uM
    PDBbind: -logKd/Ki=5.47, Ki=3.4uM
    790 1gi4:A (1.37) BS03 122 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=0.065uM
    PDBbind: -logKd/Ki=7.19, Ki=0.065uM
    BindingDB: Ki=3600nM
    791 1gi6:A (1.49) BS02 124 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=6.22, Ki=0.60uM
    BindingDB: Ki=1700nM
    792 1gi7:B (1.79) BS02 120 3.4.21.73 GO:0004252 ... P00749 11292354 MOAD: Ki=31uM
    PDBbind: -logKd/Ki=4.51, Ki=31uM
    793 1gi8:B (1.75) BS02 BMZ 3.4.21.73 GO:0004252 ... P00749 11292354 PDBbind: -logKd/Ki=5.05, Ki=8.9uM
    794 1gi9:B (1.8) BS02 123 3.4.21.73 GO:0004252 ... P00749 11292354 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.22, Ki=6.0uM
    795 1gj4:H (1.81) BS03 132 3.4.21.5 GO:0004252 ... P00734 11731301 PDBbind: -logKd/Ki=4.07, Ki=85uM
    BindingDB: Ki=60000nM
    796 1gj5:H (1.73) BS02 130 3.4.21.5 GO:0004252 ... P00734 11731301 PDBbind: -logKd/Ki=4.96, Ki=11uM
    797 1gj6:A (1.5) BS02 132 3.4.21.4 GO:0004175 ... P00760 11731301 MOAD: Ki=0.23uM
    PDBbind: -logKd/Ki=7.00, Ki=0.10uM
    BindingDB: Ki=100nM
    798 1gj7:B (1.5) BS02 132 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.009uM
    PDBbind: -logKd/Ki=7.89, Ki=0.013uM
    BindingDB: Ki=14nM
    799 1gj8:B (1.64) BS02 133 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.11uM
    PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    800 1gja:B (1.56) BS02 135 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=3.8uM
    PDBbind: -logKd/Ki=5.42, Ki=3.8uM
    BindingDB: Ki=2700nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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