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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4201 2fl2:A (2.5) BS02 N4T ? GO:0003777 ... P52732 16439123 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    BindingDB: IC50=2nM
    4202 2fl5:H (3.0) BS01 RBF N/A N/A N/A 16537445 PDBbind: -logKd/Ki=8.74, Kd=1.8nM
    4203 2fl5:L (3.0) BS01 RBF ? N/A Q5FWF9 16537445 PDBbind: -logKd/Ki=8.74, Kd=1.8nM
    4204 2fl6:A (2.5) BS02 N5T ? GO:0003777 ... P52732 16439123 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38nM
    4205 2flb:H (1.95) BS01 6NH 3.4.21.21 GO:0004252 ... P08709 16487703 PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    4206 2fle:A (1.9) BS01 AI ? GO:0004190 ... Q9J2R0 18215016 PDBbind: -logKd/Ki=7.85, Ki=14nM
    4207 2fle:B (1.9) BS01 AI ? GO:0004190 ... Q9J2R0 18215016 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    4208 2flh:A (1.2) BS01 ZEA ? GO:0004864 ... A0A1S3THR8 16998071 MOAD: Kd=106uM
    PDBbind: -logKd/Ki=3.97, Kd=106uM
    4209 2flh:A (1.2) BS02 ZEA ? GO:0004864 ... A0A1S3THR8 16998071 MOAD: Kd=106uM
    PDBbind: -logKd/Ki=3.97, Kd=106uM
    4210 2flh:A (1.2) BS03 ZEA ? GO:0004864 ... A0A1S3THR8 16998071 MOAD: Kd=106uM
    PDBbind: -logKd/Ki=3.97, Kd=106uM
    4211 2flr:H (2.35) BS01 7NH 3.4.21.21 GO:0004252 ... P08709 16621549 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: Ki=800nM
    4212 2fm0:A (2.0) BS02 M98 3.1.4.53 GO:0004114 ... Q08499 16539372 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    4213 2fm2:A (2.7) BS04 3BC 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... Q9ELS8 16352601 PDBbind: -logKd/Ki=8.15, Ki=7nM
    4214 2fm5:A (2.03) BS02 M99 3.1.4.53 GO:0004114 ... Q08499 16539372 MOAD: ic50=43nM
    PDBbind: -logKd/Ki=7.37, IC50=43nM
    BindingDB: IC50=43nM
    4215 2fmb:A (1.8) BS01 LP1 3.4.23.16 GO:0004190 ... Q66729 9827997 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    4216 2fme:A (2.1) BS01 3QC ? GO:0003777 ... P52732 16458511 MOAD: ic50=104nM
    PDBbind: -logKd/Ki=6.98, IC50=104nM
    BindingDB: IC50=306nM
    4217 2fou:A (0.99) BS03 B22 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16506782 MOAD: Kd=80nM
    PDBbind: -logKd/Ki=7.10, Kd=80nM
    4218 2fou:A (0.99) BS04 B22 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16506782 MOAD: Kd=80nM
    PDBbind: -logKd/Ki=7.10, Kd=80nM
    4219 2fov:A (1.15) BS03 B30 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16506782 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    4220 2fov:A (1.15) BS04 B30 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16506782 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    4221 2foy:A (1.55) BS02 B30 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 16506782 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    4222 2foy:A (1.55) BS03 B30 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 16506782 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    4223 2foy:A (1.55) BS04 B30 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 16506782 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    4224 2fpz:A (2.0) BS01 270 3.4.21.59 GO:0004252 ... P20231 16681368 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    4225 2fq6:A (1.78) BS01 P3F 4.4.1.13
    4.4.1.28    		 GO:0003824 ... P06721 17300162 PDBbind: -logKd/Ki=7.10, IC50=0.079uM
    4226 2fqo:A (1.87) BS02 HYI 4.4.1.21 GO:0005506 ... O34667 16686542 MOAD: Ki=0.37uM
    PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    BindingDB: Ki=370nM
    4227 2fqt:A (1.79) BS02 H1D 4.4.1.21 GO:0005506 ... O34667 16686542 MOAD: Ki=0.72uM
    PDBbind: -logKd/Ki=6.14, Ki=0.72uM
    BindingDB: Ki=720nM
    4228 2fqw:A (1.71) BS01 NOS ? GO:0005886 ... P29724 16418175 MOAD: Kd=210nM
    PDBbind: -logKd/Ki=6.68, Kd=210nM
    4229 2fqx:A (1.7) BS01 GMP ? GO:0005886 ... P29724 16418175 MOAD: Kd=71nM
    PDBbind: -logKd/Ki=7.15, Kd=71nM
    4230 2fqy:A (1.9) BS01 ADN ? GO:0005886 ... P29724 16418175 MOAD: Kd=270nM
    PDBbind: -logKd/Ki=6.57, Kd=270nM
    4231 2fr3:A (1.48) BS01 REA ? GO:0001972 ... P29373 16979656 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    4232 2fr4:A (1.95) BS01 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4233 2fr4:B (1.95) BS01 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4234 2fr4:B (1.95) BS02 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4235 2fr4:H (1.95) BS01 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4236 2fr4:H (1.95) BS02 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4237 2fr4:L (1.95) BS01 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    4238 2fs8:A (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    4239 2fs8:D (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    4240 2fs9:A (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    4241 2fs9:D (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    4242 2ftd:A (2.55) BS01 ILI 3.4.22.38 GO:0006508 ... P61277 16509577 PDBbind: -logKd/Ki=10.39, Ki=0.041nM
    4243 2fu8:A (1.8) BS03 MCO 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: Ki=20uM
    PDBbind: -logKd/Ki=4.70, Ki=20uM
    4244 2fum:A (2.89) BS01 MIX 2.7.11.1 GO:0004672 ... P9WI81 16674948 PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    4245 2fv5:A (2.1) BS02 541 3.4.24.86 GO:0004222 ... P78536 16762314 MOAD: Ki~0.033nM
    PDBbind: -logKd/Ki=11.70, Kd<2pM
    BindingDB: IC50=1nM
    4246 2fvc:A (2.0) BS01 888 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16451063 MOAD: ic50=32nM
    PDBbind: -logKd/Ki=7.49, IC50=32nM
    4247 2fvd:A (1.85) BS01 LIA 2.7.11.22 GO:0000082 ... P24941 17064073 MOAD: Ki=0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM, Kd=0.530000nM
    4248 2fw3:A (2.5) BS01 BUI 2.3.1.21 GO:0001676 ... P18886 16615901 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    BindingDB: IC50=380nM
    4249 2fwy:A (2.1) BS01 H64 3.6.4.10 GO:0005524 ... P07900 16884307 MOAD: ic50=200nM
    PDBbind: -logKd/Ki=6.70, IC50=200nM
    BindingDB: EC50=38.8nM
    4250 2fwz:A (2.1) BS01 H71 3.6.4.10 GO:0005524 ... P07900 16884307 MOAD: ic50=50nM
    PDBbind: -logKd/Ki=7.30, IC50=50nM
    BindingDB: IC50=51nM, EC50=10.00nM
    4251 2fx6:A (1.57) BS02 270 3.4.21.4 GO:0004175 ... P00760 16681368 MOAD: Ki=200uM
    PDBbind: -logKd/Ki=3.70, Ki=200uM
    4252 2fxr:A (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    4253 2fxr:D (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    4254 2fxs:A (2.0) BS01 RDA ? GO:0005524 ... P02829 19361515 MOAD: Kd=0.87uM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    4255 2fxu:A (1.35) BS04 BID 3.6.4.- GO:0000287 ... P68135 16551075 MOAD: Kd=7nM
    PDBbind: -logKd/Ki=8.15, Kd=7nM
    4256 2fxv:A (2.05) BS01 5GP 2.4.2.22 GO:0000310 ... P42085 16716072 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    4257 2fxv:B (2.05) BS01 5GP 2.4.2.22 GO:0000310 ... P42085 16716072 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    4258 2fyv:A (1.9) BS02 W72 3.2.1.114 GO:0000139 ... Q24451 17010621 MOAD: ic50=0.3mM
    PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    4259 2fzc:A (2.1) BS01 EOP 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=1900uM
    PDBbind: -logKd/Ki=2.70, Ki=1990uM
    4260 2fzg:A (2.25) BS01 EOB 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=420uM
    PDBbind: -logKd/Ki=3.38, Ki=420uM
    4261 2fzk:A (2.5) BS01 EOZ 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=310uM
    PDBbind: -logKd/Ki=3.60, Ki=250uM
    4262 2fzz:A (2.2) BS01 5QC 3.4.21.6 GO:0004252 ... P00742 16730984 MOAD: Ki=30pM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    BindingDB: Ki=0.03nM
    4263 2g00:A (2.1) BS01 4QC 3.4.21.6 GO:0004252 ... P00742 16963264 MOAD: Ki=0.18nM
    PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    BindingDB: Ki=0.18nM
    4264 2g01:A (3.5) BS02 73Q 2.7.11.24 GO:0004672 ... P45983 16527482 PDBbind: -logKd/Ki=5.91, IC50=1.22uM
    BindingDB: IC50=1220nM
    4265 2g0g:A (2.54) BS01 SP0 ? GO:0003677 ... P37231 16640330 PDBbind: -logKd/Ki=6.29, IC50=512nM
    BindingDB: IC50=512nM, EC50=1750nM
    4266 2g0h:A (2.3) BS01 SP3 ? GO:0003677 ... P37231 16640330 MOAD: ic50=22.7nM
    PDBbind: -logKd/Ki=7.64, IC50=22.7nM
    BindingDB: IC50=23nM, EC50=0.78nM
    4267 2g19:A (1.7) BS02 4HG 1.14.11.29 GO:0005506 ... Q9GZT9 16782814 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1400nM
    4268 2g1q:A (2.51) BS02 N9H ? GO:0003777 ... P52732 16603356 PDBbind: -logKd/Ki=7.36, IC50=44nM
    4269 2g1r:A (2.42) BS01 3IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    4270 2g1y:A (2.5) BS01 5IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    4271 2g24:A (1.9) BS01 7IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=5.40, IC50=4uM
    BindingDB: IC50=4000nM
    4272 2g2r:H (2.75) BS01 TNS ? GO:0002250 ... P84751 17089439 PDBbind: -logKd/Ki=7.89, Kd=13nM
    4273 2g2r:L (2.75) BS01 TNS N/A N/A N/A 17089439 PDBbind: -logKd/Ki=7.89, Kd=13nM
    4274 2g4b:A (2.5) BS01 rna ? GO:0003676 ... P26368 16818232 PDBbind: Kd=1.8uM
    4275 2g5p:A (2.4) BS01 ADF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=8.42, Ki=3.8nM
    BindingDB: Ki=3.8nM
    4276 2g5t:A (2.3) BS01 ACF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=9.09, Ki=0.82nM
    BindingDB: Ki=0.820000nM
    4277 2g5u:A (1.8) BS01 PCQ ? GO:0005179 ... P02766 15610856 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    4278 2g5u:B (1.8) BS01 PCQ ? GO:0005179 ... P02766 15610856 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    4279 2g63:B (2.0) BS01 AAF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=8.17, Ki=6.7nM
    BindingDB: Ki=6.7nM
    4280 2g6p:A (1.9) BS03 HM2 3.4.11.18 GO:0006508 ... P53582 16724298 MOAD: ic50=0.6uM
    PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    BindingDB: EC50=190nM, IC50=860nM
    4281 2g70:A (2.4) BS02 HNT 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    4282 2g70:A (2.4) BS03 HNT 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    4283 2g71:A (2.2) BS02 FTS 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=35nM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    BindingDB: Ki=220nM
    4284 2g72:A (2.0) BS02 F21 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=315nM
    PDBbind: -logKd/Ki=6.50, Ki=315nM
    BindingDB: Ki=1200nM
    4285 2g78:A (1.7) BS01 REA ? GO:0001972 ... P29373 17447762 PDBbind: -logKd/Ki=6.92, Kd=120nM
    4286 2g79:A (1.69) BS01 RET ? GO:0001972 ... P29373 17447762 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    4287 2g83:A (2.8) BS04 GDP ? GO:0003924 ... P63096 16981699 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    4288 2g8n:A (2.15) BS01 F83 2.1.1.28 GO:0004603 ... P11086 16942016 MOAD: Ki=0.063uM
    PDBbind: -logKd/Ki=7.20, Ki=63nM
    BindingDB: Ki=63nM
    4289 2g94:A (1.86) BS01 ZPQ 3.4.23.46 GO:0004190 ... P56817 16620080 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: Ki=0.300000nM
    4290 2g96:A (2.9) BS01 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    4291 2g96:A (2.9) BS02 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    4292 2g96:B (2.9) BS01 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    4293 2g96:B (2.9) BS02 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    4294 2g97:A (2.9) BS01 DGB 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=6.82, Kd=152nM
    4295 2g97:B (2.9) BS01 DGB 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=6.82, Kd=152nM
    4296 2g9q:A (2.5) BS03 1AB 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=400nM
    4297 2g9r:A (2.07) BS01 G27 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    4298 2g9u:A (2.15) BS02 G27 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    4299 2g9v:A (2.15) BS02 IFM 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: Ki=5.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.21uM
    BindingDB: IC50=1210nM, Ki=5200nM
    4300 2g9x:A (2.5) BS01 NU5 2.7.11.22 GO:0000082 ... P24941 16669651 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    4301 2ga2:A (1.95) BS03 A19 3.4.11.18 GO:0006508 ... P50579 16632353 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    BindingDB: IC50=9100nM
    4302 2gbf:A (3.1) BS01 AIA 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=7.92, Ki=12nM
    4303 2gbg:A (3.0) BS01 1AD 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=7.25, Ki=56nM
    4304 2gbi:A (3.3) BS01 XIH 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    4305 2gc8:A (2.2) BS01 885 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16722622 MOAD: ic50=3.1uM
    PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    4306 2gcd:A (2.55) BS01 STU 2.7.11.1 GO:0004672 ... Q9JLS3 16761096 PDBbind: -logKd/Ki=5.52, IC50=3uM
    4307 2gd8:A (1.46) BS02 PO1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17181151 MOAD: ic50=379nM
    PDBbind: -logKd/Ki=7.41, IC50=39nM
    BindingDB: IC50=379nM, Ki=270nM, Kd=3750nM
    4308 2gd8:A (1.46) BS03 PO1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17181151 MOAD: ic50=379nM
    PDBbind: -logKd/Ki=7.41, IC50=39nM
    BindingDB: IC50=379nM, Ki=270nM, Kd=3750nM
    4309 2gde:H (2.0) BS03 SN3 3.4.21.5 GO:0004252 ... P00734 16895415 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    4310 2gdo:A (3.0) BS01 12C 2.7.11.1 GO:0000077 ... O14757 16603354 PDBbind: -logKd/Ki=9.49, IC50=0.32nM
    BindingDB: IC50=0.320000nM
    4311 2ge5:A (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    4312 2ge5:A (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    4313 2ge5:B (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    4314 2ge5:B (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    4315 2gej:A (2.6) BS01 GDD 2.4.1.345 GO:0004377 ... A0QWG6 17510062 PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    4316 2gek:A (2.4) BS01 GDP 2.4.1.345 GO:0004377 ... A0QWG6 17510062 PDBbind: -logKd/Ki=7.52, Kd=0.03uM
    4317 2gfd:A (2.3) BS01 RDA ? GO:0005524 ... P41148 19361515 MOAD: Kd=0.52uM
    PDBbind: -logKd/Ki=6.28, Kd=0.52uM
    4318 2gfj:A (1.8) BS03 VI 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=150uM
    PDBbind: -logKd/Ki=3.82, IC50=150uM
    4319 2gfk:A (1.9) BS03 VII 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    4320 2gfs:A (1.752) BS01 PQB 2.7.11.24 GO:0000077 ... Q16539 16509574 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    BindingDB: IC50=400nM
    4321 2gg0:A (1.28) BS03 U11 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    4322 2gg2:A (1.0) BS03 U12 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=250nM
    4323 2gg3:A (1.45) BS03 U13 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    BindingDB: IC50=580nM
    4324 2gg5:A (2.12) BS03 U19 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=250nM
    4325 2gg7:A (1.12) BS03 U14 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=1.75uM
    PDBbind: -logKd/Ki=5.76, IC50=1.75uM
    BindingDB: IC50=1750nM
    4326 2gg8:A (1.8) BS03 U15 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=25uM
    PDBbind: -logKd/Ki=4.60, IC50=25uM
    4327 2gg9:A (1.05) BS03 U16 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    BindingDB: IC50=3500nM
    4328 2gga:A (1.7) BS02 GPJ 2.5.1.19 GO:0003824 ... Q9R4E4 16916934 MOAD: Ki=6mM
    PDBbind: -logKd/Ki=1.96, IC50=11mM
    4329 2ggb:A (2.13) BS03 U17 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=12000nM
    4330 2ggd:A (1.7) BS02 GPJ 2.5.1.19 GO:0003824 ... Q9R4E4 16916934 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=3.80, IC50=160uM
    4331 2ggx:A (1.9) BS04 NPJ ? N/A P35247 16636058 MOAD: ic50=0.32mM
    PDBbind: -logKd/Ki=3.49, IC50=0.32mM
    4332 2gh6:A (2.203) BS02 CF3 3.5.1.- GO:0000122 ... Q70I53 17401192 PDBbind: -logKd/Ki=4.95, IC50=11.19uM
    4333 2gh7:A (1.0) BS01 BTN ? GO:0009374 ... P22629 16699183 MOAD: Kd~0.1pM
    PDBbind: -logKd/Ki=13.00, Kd=0.1pM
    BindingDB: Kd=1.000000nM
    4334 2ghg:A (3.5) BS01 A53 2.7.11.1 GO:0000077 ... O14757 16644221 PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: Ki=126nM
    4335 2gie:A (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4336 2gie:A (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4337 2gie:B (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4338 2gie:B (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4339 2gie:C (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4340 2gie:C (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4341 2gie:D (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4342 2gie:D (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    4343 2gig:A (1.83) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4344 2gig:A (1.83) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4345 2gig:B (1.83) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4346 2gig:B (1.83) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4347 2gih:A (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4348 2gih:A (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4349 2gih:B (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4350 2gih:B (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    4351 2gii:A (2.3) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4352 2gii:A (2.3) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4353 2gii:B (2.3) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4354 2gii:B (2.3) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4355 2gij:A (1.93) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4356 2gij:A (1.93) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4357 2gij:B (1.93) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4358 2gij:B (1.93) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    4359 2giu:A (2.2) BS01 FBR ? GO:0003677 ... Q92731 16632357 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=1.8nM, EC50=4nM
    4360 2gj4:A (1.6) BS02 2TH 2.4.1.1 GO:0000166 ... P00489 16945526 MOAD: ic50=319nM
    PDBbind: -logKd/Ki=6.50, IC50=319nM
    4361 2gj5:A (2.4) BS01 VD3 ? GO:0005515 ... P02754 18004750 MOAD: Kd=4.74nM
    PDBbind: -logKd/Ki=8.32, Kd=4.74nM
    4362 2gj5:A (2.4) BS02 VD3 ? GO:0005515 ... P02754 18004750 MOAD: Kd=4.74nM
    PDBbind: -logKd/Ki=8.32, Kd=4.74nM
    4363 2gje:A (3.37) BS01 rna ? GO:0003677 ... Q952G2 16923390 PDBbind: Kd=7nM
    4364 2gje:D (3.37) BS01 rna ? GO:0003677 ... P90629 16923390 PDBbind: Kd=7nM
    4365 2gkd:A (-1.00) BS01 dna ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    4366 2gkd:A (-1.00) BS02 dna ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    4367 2gkl:A (1.86) BS02 PD2 3.5.2.6 GO:0008270 ... P26918 17307979 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    4368 2gl0:A (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    4369 2gl0:B (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    4370 2gl0:E (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    4371 2glm:A (2.6) BS01 SCB 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    4372 2glm:B (2.6) BS01 SCB 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    4373 2glo:A (-1.00) BS01 dna ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    4374 2glo:A (-1.00) BS02 dna ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    4375 2glp:C (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    BindingDB: IC50=39800nM
    4376 2glp:D (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    BindingDB: IC50=39800nM
    4377 2gm1:A (2.3) BS02 2AZ ? GO:0003777 ... P52732 16730979 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    BindingDB: IC50=100nM
    4378 2gm9:A (2.3) BS02 3TH 2.4.1.1 GO:0000166 ... P00489 16945526 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    4379 2gmk:A (1.65) BS01 AMP 3.1.27.- GO:0003676 ... P22069 18001769 MOAD: Ki=590uM
    PDBbind: -logKd/Ki=3.23, Ki=590uM
    4380 2gmk:A (1.65) BS02 AMP 3.1.27.- GO:0003676 ... P22069 18001769 MOAD: Ki=590uM
    PDBbind: -logKd/Ki=3.23, Ki=590uM
    4381 2gmv:A (2.3) BS03 UN8 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 17532214 MOAD: ic50=0.63uM
    PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    BindingDB: IC50=630nM
    4382 2gmx:A (3.5) BS02 877 2.7.11.24 GO:0004672 ... P45983 16759099 PDBbind: -logKd/Ki=7.11, IC50=77nM
    BindingDB: IC50=77nM
    4383 2gnf:A (2.28) BS02 Y27 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    BindingDB: IC50=42000nM
    4384 2gnh:A (2.05) BS02 H52 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=149nM
    PDBbind: -logKd/Ki=6.83, IC50=149nM
    BindingDB: IC50=394nM
    4385 2gnh:A (2.05) BS03 H52 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=149nM
    PDBbind: -logKd/Ki=6.83, IC50=149nM
    BindingDB: IC50=394nM
    4386 2gni:A (2.27) BS02 M77 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=2280nM
    PDBbind: -logKd/Ki=5.64, IC50=2.28uM
    BindingDB: IC50=1494nM
    4387 2gnj:A (2.28) BS02 Y27 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    BindingDB: IC50=42000nM
    4388 2gnl:A (2.6) BS02 H52 2.7.11.11 GO:0001669 ... P00517 16699172 PDBbind: -logKd/Ki=7.24, IC50=58nM
    BindingDB: IC50=394nM
    4389 2go4:A (2.7) BS04 TUX 3.5.1.108 GO:0006796 ... O67648 16800620 PDBbind: -logKd/Ki=5.15, IC50=7uM
    4390 2gpp:A (2.6) BS02 1BA ? N/A P62508 16990259 PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    4391 2gqn:A (1.8) BS01 BLP 4.4.1.13
    4.4.1.28    		 GO:0003824 ... P06721 17300162 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    4392 2gss:A (1.9) BS01 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 MOAD: Ki=11.5uM
    PDBbind: -logKd/Ki=4.94, Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    4393 2gss:B (1.9) BS01 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 MOAD: Ki=11.5uM
    PDBbind: -logKd/Ki=4.94, Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    4394 2gst:A (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    4395 2gst:B (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    4396 2gsu:A (2.0) BS03 AMP N/A N/A N/A 16893180 MOAD: Ki=268uM
    PDBbind: -logKd/Ki=3.59, Ki=260uM
    4397 2gtk:A (2.1) BS02 208 ? GO:0003677 ... P37231 16737814 MOAD: ic50=0.251uM
    PDBbind: -logKd/Ki=6.60, IC50=0.251uM
    BindingDB: EC50=760nM, IC50=251nM
    4398 2gtv:X (-1.00) BS01 TSA 5.4.99.5 GO:0046417 ... Q57696 17994104 PDBbind: -logKd/Ki=5.15, Kd=7uM
    4399 2gu8:A (2.2) BS02 796 2.7.11.11 GO:0000287 ... P17612 16765046 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=8.59, IC50=2.6nM
    BindingDB: IC50=0.100000nM
    4400 2gv6:A (2.1) BS01 730 3.4.21.109 GO:0004252 ... Q9Y5Y6 16821772 MOAD: Ki=0.046uM
    PDBbind: -logKd/Ki=7.34, Ki=46nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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