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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 1bm6:A (-1.00) BS06 MSB 3.4.24.17 GO:0004222 ... P08254 9760240 PDBbind: -logKd/Ki=7.89, Ki=13nM
    202 1bm7:A (2.0) BS01 FLF ? GO:0005179 ... P02766 9789022 MOAD: Kd=30nM
    PDBbind: -logKd/Ki=7.52, Kd=30nM
    BindingDB: IC50=2900nM
    203 1bm7:B (2.0) BS01 FLF ? GO:0005179 ... P02766 9789022 MOAD: Kd=30nM
    PDBbind: -logKd/Ki=7.52, Kd=30nM
    BindingDB: IC50=2900nM
    204 1bma:A (1.8) BS02 0QH 3.4.21.36 GO:0004252 ... P00772 7604279 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    205 1bmk:A (2.4) BS01 SB5 2.7.11.24 GO:0000077 ... Q16539 9753691 PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    206 1bmm:H (2.6) BS03 BM2 3.4.21.5 GO:0004252 ... P00734 8745399 PDBbind: -logKd/Ki=7.10, Ki=79nM
    BindingDB: IC50=390nM
    207 1bmn:H (2.8) BS03 BM9 3.4.21.5 GO:0004252 ... P00734 8745399 PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    BindingDB: IC50=16nM, Ki=3.6nM
    208 1bmq:A (2.5) BS01 MNO 3.4.22.36 GO:0004197 ... P29466 9987822 PDBbind: -logKd/Ki=7.42, IC50=38nM
    209 1bmq:B (2.5) BS01 MNO 3.4.22.36 GO:0004197 ... P29466 9987822 PDBbind: -logKd/Ki=7.42, IC50=38nM
    210 1bn1:A (2.1) BS02 AL5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.46nM
    PDBbind: -logKd/Ki=9.34, Kd=0.46nM
    BindingDB: Kd=0.46nM
    211 1bn3:A (2.2) BS02 AL6 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.13nM
    PDBbind: -logKd/Ki=9.89, Kd=0.13nM
    BindingDB: Kd=0.13nM
    212 1bn4:A (2.1) BS02 AL9 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.49nM
    PDBbind: -logKd/Ki=9.31, Kd=0.49nM
    BindingDB: Kd=0.49nM
    213 1bnm:A (2.6) BS02 AL8 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 PDBbind: -logKd/Ki=10.00, Kd=0.10nM
    BindingDB: Kd=0.1nM
    214 1bnn:A (2.3) BS02 AL1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.1nM
    PDBbind: -logKd/Ki=10.00, Kd=0.10nM
    BindingDB: Kd=0.1nM
    215 1bnq:A (2.4) BS02 AL4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.32nM
    PDBbind: -logKd/Ki=9.49, Kd=0.32nM
    BindingDB: Kd=0.32nM
    216 1bnt:A (2.15) BS02 AL2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.16nM
    PDBbind: -logKd/Ki=9.80, Kd=0.16nM
    BindingDB: Kd=0.16nM
    217 1bnu:A (2.15) BS02 AL3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.20nM
    BindingDB: Kd=0.2nM
    218 1bnv:A (2.4) BS02 AL7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=1.7nM
    PDBbind: -logKd/Ki=8.77, Kd=1.70nM
    BindingDB: Kd=1.7nM
    219 1bnw:A (2.25) BS02 TPD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.83nM
    PDBbind: -logKd/Ki=9.08, Kd=0.83nM
    BindingDB: Kd=0.83nM
    220 1bo5:O (3.2) BS01 FBP 2.7.1.30 GO:0004370 ... P0A6F3 9843423 PDBbind: -logKd/Ki=3.60, Ki=0.25mM
    221 1bp0:A (2.4) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 10653645 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    222 1bq3:D (2.7) BS01 IHP 5.4.2.11 GO:0003824 ... P00950 10369755 PDBbind: -logKd/Ki=5.40, Ki=4uM
    223 1bq4:A (2.5) BS01 BHC 5.4.2.11 GO:0003824 ... P00950 10369755 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    224 1bqm:A (3.1) BS01 HBY 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 9813120 PDBbind: -logKd/Ki=7.35, IC50=0.045uM
    225 1bqn:A (3.3) BS01 HBY 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 9813120 PDBbind: -logKd/Ki=6.22, IC50=0.60uM
    226 1bqo:B (2.3) BS06 N25 3.4.24.17 GO:0004222 ... P08254 9733482 MOAD: ic50=18.4nM
    PDBbind: -logKd/Ki=7.74, IC50=18.4nM
    BindingDB: IC50=18nM, Ki=18nM
    227 1br5:A (2.5) BS01 NEO 3.2.2.22 GO:0017148 ... P02879 9086280 MOAD: Ki>2mM
    PDBbind: -logKd/Ki=2.70, Ki>2mM
    228 1br6:A (2.3) BS01 PT1 3.2.2.22 GO:0017148 ... P02879 9086280 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    229 1bra:A (2.2) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 8478942 MOAD: Ki=15000uM
    PDBbind: -logKd/Ki=1.82, Ki=15000uM
    230 1bsk:A (3.0) BS02 MLN 3.5.1.88 GO:0005515 ... P0A6K3 10200158 PDBbind: -logKd/Ki=4.12, Ki=76uM
    231 1bsu:A (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=230nM
    232 1bsu:A (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=230nM
    233 1bsu:B (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=230nM
    234 1bsu:B (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=230nM
    235 1btn:A (2.0) BS01 I3P ? GO:0005543 ... Q62261 7588597 MOAD: Kd=40uM
    PDBbind: -logKd/Ki=4.40, Kd=40uM
    236 1bua:A (2.15) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=550nM
    237 1bua:A (2.15) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=550nM
    238 1bua:B (2.15) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=550nM
    239 1bua:B (2.15) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10074946 PDBbind: Kd=550nM
    240 1bug:A (2.7) BS03 URS 1.10.3.1 GO:0004097 ... Q9ZP19 9846879 PDBbind: -logKd/Ki=4.37, IC50=43uM
    241 1bux:A (2.8) BS01 PPS 2.7.4.6 GO:0004550 ... P22887 9786875 PDBbind: -logKd/Ki=4.85, Kd=14uM
    242 1bux:B (2.8) BS01 PPS 2.7.4.6 GO:0004550 ... P22887 9786875 PDBbind: -logKd/Ki=4.85, Kd=14uM
    243 1bv7:A (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    244 1bv7:B (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    245 1bv9:A (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    246 1bv9:B (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    247 1bwa:A (1.9) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    248 1bwa:B (1.9) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=2.5nM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    249 1bwb:A (1.8) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 PDBbind: -logKd/Ki=8.42, Ki=3.8nM
    250 1bwb:B (1.8) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=3.8nM
    PDBbind: -logKd/Ki=8.42, Ki=3.8nM
    251 1bwn:A (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    252 1bwn:A (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    253 1bwn:B (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    254 1bwn:B (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    255 1bxo:A (0.95) BS02 PP7 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    256 1bxq:A (1.41) BS01 PP8 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    257 1bxr:A (2.1) BS04 ANP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 10029528 PDBbind: -logKd/Ki=3.40, Ki=0.4mM
    258 1bxr:A (2.1) BS05 ANP 6.3.4.16
    6.3.5.5    		 GO:0000166 ... P00968 10029528 PDBbind: -logKd/Ki=3.40, Ki=0.4mM
    259 1by4:A (2.1) BS01 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    260 1by4:A (2.1) BS02 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    261 1by4:B (2.1) BS01 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    262 1by4:B (2.1) BS02 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    263 1by4:B (2.1) BS03 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    264 1by4:C (2.1) BS01 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    265 1by4:C (2.1) BS02 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    266 1by4:D (2.1) BS01 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    267 1by4:D (2.1) BS02 dna ? GO:0003700 ... P19793 10669605 PDBbind: Kd=350nM
    268 1bzc:A (2.35) BS01 TPI 3.1.3.48 GO:0004725 ... P18031 9922143 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    269 1bzf:A (-1.00) BS01 TMQ 1.5.1.3 GO:0004146 ... P00381 10091649 PDBbind: -logKd/Ki=8.30, Kd=5nM
    270 1bzj:A (2.25) BS01 PIC 3.1.3.48 GO:0004725 ... P18031 9922143 MOAD: Ki=22uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    BindingDB: Ki=22000nM
    271 1bzs:A (1.7) BS05 BSI 3.4.24.34 GO:0004222 ... P22894 10354399 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    272 1bzy:A (2.0) BS01 IMU 2.4.2.8 GO:0000166 ... P00492 10360366 MOAD: Kd=4.6nM
    PDBbind: -logKd/Ki=8.34, Kd=4.6nM
    BindingDB: Ki=4.6nM
    273 1c12:A (2.6) BS01 TRZ ? GO:0005576 ... P01837 10525411 PDBbind: -logKd/Ki=8.72, Kd=1.9nM
    274 1c12:B (2.6) BS01 TRZ ? N/A P01869 10525411 PDBbind: -logKd/Ki=8.72, Kd=1.9nM
    275 1c1r:A (1.37) BS04 BAI 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.0235uM
    PDBbind: -logKd/Ki=7.63, Ki=0.0235uM
    276 1c1u:H (1.75) BS03 BAI 3.4.21.5 GO:0004252 ... P00734 9468142 PDBbind: -logKd/Ki=8.25, Ki=0.0056uM
    277 1c1v:H (1.98) BS03 BAB 3.4.21.5 GO:0004252 ... P00734 9468142 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=0.023uM
    278 1c29:A (2.3) BS01 HE1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=472nM
    PDBbind: -logKd/Ki=6.33, IC50=472nM
    279 1c2t:B (2.1) BS01 NHS 2.1.2.2 GO:0003824 ... P08179 10606510 MOAD: Ki=260nM
    PDBbind: -logKd/Ki=6.59, Ki=260nM
    280 1c3b:A (2.25) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 10595535 PDBbind: -logKd/Ki=7.57, Ki=27nM
    BindingDB: IC50=200nM, Ki=27nM
    281 1c3e:A (2.1) BS01 NHR 2.1.2.2 GO:0003824 ... P08179 10606510 PDBbind: -logKd/Ki=6.59, Ki=260nM
    282 1c3i:B (1.83) BS06 TR1 3.4.24.17 GO:0004222 ... P08254 10877850 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    283 1c3r:A (2.0) BS02 TSN ? GO:0004407 ... O67135 10490031 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    284 1c3r:B (2.0) BS02 TSN ? GO:0004407 ... O67135 10490031 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    285 1c3x:A (2.4) BS02 8IG 2.4.2.1 GO:0003824 ... P81989 10600382 PDBbind: -logKd/Ki=3.68, Ki=210uM
    286 1c3x:B (2.4) BS03 8IG 2.4.2.1 GO:0003824 ... P81989 10600382 PDBbind: -logKd/Ki=3.68, Ki=210uM
    287 1c4u:2 (2.1) BS02 IH1 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.043nM
    PDBbind: -logKd/Ki=10.37, Ki=0.043nM
    288 1c4v:2 (2.1) BS02 IH2 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.016nM
    PDBbind: -logKd/Ki=10.80, Ki=0.016nM
    289 1c4y:2 (2.7) BS03 IH3 3.4.21.5 GO:0004252 ... P00734 10713516 PDBbind: -logKd/Ki=7.92, Ki=12nM
    290 1c50:A (2.3) BS02 CHI 2.4.1.1 GO:0000166 ... P00489 10873856 MOAD: ic50=334nM
    PDBbind: -logKd/Ki=6.48, IC50=334nM
    291 1c5c:H (1.61) BS01 TK4 N/A N/A N/A 11183784 PDBbind: -logKd/Ki=6.96, Kd=110nM
    292 1c5c:L (1.61) BS01 TK4 N/A N/A N/A 11183784 MOAD: Kd=110nM
    PDBbind: -logKd/Ki=6.96, Kd=110nM
    293 1c5n:H (1.5) BS03 ESI 3.4.21.5 GO:0004252 ... P00734 10779411 MOAD: Ki=20uM
    PDBbind: -logKd/Ki=4.70, Ki=20uM
    BindingDB: Ki=20000nM
    294 1c5q:A (1.43) BS02 ESI 3.4.21.4 GO:0004175 ... P00760 10779411 MOAD: Ki=0.44uM
    PDBbind: -logKd/Ki=6.36, Ki=0.44uM
    BindingDB: Ki=440nM
    295 1c5s:A (1.36) BS02 ESX 3.4.21.4 GO:0004175 ... P00760 10779411 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    BindingDB: Ki=1000nM
    296 1c5t:A (1.37) BS02 ESP 3.4.21.4 GO:0004175 ... P00760 10779411 MOAD: Ki=80uM
    PDBbind: -logKd/Ki=4.10, Ki=80uM
    BindingDB: Ki=80000nM
    297 1c5x:B (1.75) BS02 ESI 3.4.21.73 GO:0004252 ... P00749 10779411 MOAD: Ki=0.21uM
    PDBbind: -logKd/Ki=6.68, Ki=0.21uM
    BindingDB: Ki=210nM
    298 1c5y:B (1.65) BS02 ESP 3.4.21.73 GO:0004252 ... P00749 10779411 MOAD: Ki=63uM
    PDBbind: -logKd/Ki=4.20, Ki=63uM
    BindingDB: Ki=63000nM
    299 1c6y:A (2.5) BS01 MK1 3.4.24.- GO:0004190 ... O09893 10739910 PDBbind: -logKd/Ki=9.51, Ki=0.31nM
    300 1c6y:B (2.5) BS01 MK1 3.4.24.- GO:0004190 ... O09893 10739910 MOAD: Ki=0.31nM
    PDBbind: -logKd/Ki=9.51, Ki=0.31nM
    301 1c70:A (2.5) BS01 L75 3.4.23.- GO:0004190 ... O92103 10739910 PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    302 1c70:B (2.5) BS01 L75 3.4.23.- GO:0004190 ... O92103 10739910 MOAD: Ki=0.05nM
    PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    303 1c7f:A (2.0) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=0.3nM
    PDBbind: -logKd/Ki=9.52, Kd=0.30nM
    304 1c83:A (1.8) BS01 OAI 3.1.3.48 GO:0004725 ... P18031 10702277 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=7943.28nM
    305 1c84:A (2.35) BS01 761 3.1.3.48 GO:0004725 ... P18031 10702277 MOAD: Ki=9.9uM
    PDBbind: -logKd/Ki=5.00, Ki=9.9uM
    BindingDB: Ki=10000nM
    306 1c85:A (2.72) BS01 OBA 3.1.3.48 GO:0004725 ... P18031 10702277 PDBbind: -logKd/Ki=4.64, Ki=23uM
    BindingDB: Ki=22908.68nM
    307 1c86:A (2.3) BS01 OPA 3.1.3.48 GO:0004725 ... P18031 10744717 MOAD: Ki=20uM
    PDBbind: -logKd/Ki=4.70, Ki=20uM
    BindingDB: Ki=71449632607551nM
    308 1c87:A (2.1) BS01 OPA 3.1.3.48 GO:0004725 ... P18031 10744717 MOAD: Ki=63uM
    PDBbind: -logKd/Ki=4.20, Ki=63uM
    BindingDB: Ki=71449632607551nM
    309 1c88:A (1.8) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 10744717 MOAD: Ki=5.1uM
    PDBbind: -logKd/Ki=5.29, Ki=5.1uM
    BindingDB: IC50=500000nM, Ki=11500nM
    310 1c8k:A (1.76) BS02 CPB 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1200nM
    311 1c8l:A (2.3) BS02 BIN 2.4.1.1 GO:0000166 ... P00489 11368311 MOAD: ic50=6.9nM
    PDBbind: -logKd/Ki=8.16, IC50=6.9nM
    312 1c8v:A (2.2) BS01 HE1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=472nM
    PDBbind: -logKd/Ki=6.33, IC50=472nM
    313 1c9d:A (2.3) BS01 HF1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=499nM
    PDBbind: -logKd/Ki=6.30, IC50=499nM
    314 1ca8:B (2.1) BS03 0KV 3.4.21.5 GO:0004252 ... P00734 9724521 PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    BindingDB: IC50=0.67nM
    315 1caq:A (1.8) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=19nM
    PDBbind: -logKd/Ki=7.72, Ki=19nM
    316 1cbr:A (2.9) BS01 REA ? GO:0005501 ... P62965 7704533 PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=>200nM
    317 1cbr:B (2.9) BS01 REA ? GO:0005501 ... P62965 7704533 PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=>200nM
    318 1cbx:A (2.0) BS02 BZS 3.4.17.1 GO:0004181 ... P00730 1738164 MOAD: Ki=0.45uM
    PDBbind: -logKd/Ki=6.35, Ki=0.45uM
    BindingDB: Ki=500nM
    319 1ce5:A (1.9) BS02 BEN 3.4.21.4 GO:0004175 ... P00760 10651279 MOAD: Ki=18.4uM
    PDBbind: -logKd/Ki=4.74, Ki=18.4uM
    320 1cea:A (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    321 1cea:B (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    322 1ceb:A (2.07) BS01 AMH 3.4.21.7 N/A P00747 8611560 MOAD: Kd~1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    323 1cet:A (2.05) BS01 CLQ 1.1.1.27 GO:0003824 ... Q27743 10187806 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    324 1cgl:A (2.4) BS04 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    PDBbind: -logKd/Ki=6.87, Ki=0.135uM
    325 1cgl:A (2.4) BS05 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    PDBbind: -logKd/Ki=6.87, Ki=0.135uM
    326 1ch8:A (2.5) BS02 GPX 6.3.4.4 GO:0000166 ... P0A7D4 10364182 PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    327 1cil:A (1.6) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=0.372nM
    PDBbind: -logKd/Ki=9.43, Ki=0.37nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    328 1cim:A (2.1) BS02 PTS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=1.52nM
    PDBbind: -logKd/Ki=8.82, Ki=1.52nM
    BindingDB: Ki=1.5nM
    329 1cin:A (2.1) BS02 MTS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=1.88nM
    PDBbind: -logKd/Ki=8.73, Ki=1.88nM
    BindingDB: Ki=1.9nM
    330 1cit:A (2.7) BS01 dna ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    331 1cit:A (2.7) BS02 dna ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    332 1ciz:A (1.64) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=36nM
    PDBbind: -logKd/Ki=7.44, Ki=36nM
    333 1cj1:A (3.0) BS01 C78 ? N/A P62993 10395476 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    334 1clu:A (1.7) BS01 DBG 3.6.5.2 GO:0003924 ... P01112 10359839 MOAD: Kd=5.4nM
    PDBbind: -logKd/Ki=8.27, Kd=5.4nM
    335 1cnw:A (2.0) BS02 EG1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=19nM
    PDBbind: -logKd/Ki=7.72, Kd=19nM
    336 1cnx:A (1.9) BS02 EG2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=43nM
    PDBbind: -logKd/Ki=7.37, Kd=43nM
    337 1cny:A (2.3) BS02 EG3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    338 1cp6:A (1.9) BS03 BUB 3.4.11.10 GO:0006508 ... Q01693 10413478 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    339 1cps:A (2.25) BS02 CPM 3.4.17.1 GO:0004181 ... P00730 1527041 MOAD: Ki=0.22uM
    PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    340 1cqp:A (2.6) BS02 803 ? N/A P20701 10493852 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    BindingDB: Kd=12900nM, IC50=2400nM
    341 1cqp:A (2.6) BS03 803 ? N/A P20701 10493852 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    BindingDB: Kd=12900nM, IC50=2400nM
    342 1cr6:A (2.8) BS01 CPU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10485878 PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    343 1cs4:A (2.5) BS04 101 4.6.1.1 GO:0009190 ... P30803 11087399 PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    344 1cs4:B (2.5) BS03 101 4.6.1.1 GO:0009190 ... P26769 11087399 MOAD: ic50=2.7uM
    PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    345 1csh:A (1.65) BS02 AMX 2.3.3.1 GO:0004108 ... P23007 8011640 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    346 1csi:A (1.7) BS02 CMX 2.3.3.1 GO:0004108 ... P23007 8011640 MOAD: Ki=1.6nM
    PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    347 1csr:A (1.7) BS02 FAM 2.3.3.1 GO:0004108 ... P23007 7492547 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    348 1css:A (1.7) BS02 FCX 2.3.3.1 GO:0004108 ... P23007 7492547 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    349 1ct8:A (2.2) BS01 TAA ? GO:0005576 ... P01837 10574796 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    350 1ct8:B (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    351 1ct8:B (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    352 1ct8:C (2.2) BS01 TAA ? GO:0005576 ... P01837 10574796 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    353 1ct8:D (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    354 1ct8:D (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    355 1ctr:A (2.45) BS05 TFP ? GO:0000086 ... P0DP23 7803388 PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Kd=1000nM
    356 1ctt:A (2.2) BS02 DHZ 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=30uM
    PDBbind: -logKd/Ki=4.52, Ki=30uM
    357 1ctu:A (2.3) BS02 ZEB 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=1.2pM
    PDBbind: -logKd/Ki=11.92, Ki=1.2pM
    358 1cw2:A (2.0) BS01 HSP 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=715nM
    PDBbind: -logKd/Ki=6.15, IC50=715nM
    359 1cx9:A (2.3) BS01 NHP 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=178nM
    PDBbind: -logKd/Ki=6.75, IC50=178nM
    360 1czc:A (2.5) BS02 GUA 2.6.1.1 GO:0003824 ... P00509 10731702 MOAD: Kd=1.5mM
    PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    361 1czk:A (1.9) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Kd=1.5nM
    PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    362 1czl:A (1.8) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=1400000000M^-1
    PDBbind: -logKd/Ki=9.15, Kd=0.71nM
    363 1czo:A (1.85) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=35000M^-1
    PDBbind: -logKd/Ki=4.55, Kd=28uM
    364 1czr:A (1.9) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1.0nM
    365 1d04:A (1.85) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=38000M^-1
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    366 1d09:A (2.1) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 10651286 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    367 1d1p:A (2.2) BS01 EPE 3.1.3.2
    3.1.3.48    		 GO:0003993 ... P40347 10684639 PDBbind: -logKd/Ki=3.60, Ki=0.25mM
    368 1d2e:A (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    369 1d2s:A (1.55) BS02 DHT ? N/A P04278 10675319 PDBbind: -logKd/Ki=9.74, Kd=0.182nM
    BindingDB: IC50=3.8nM, Kd=0.182000nM
    370 1d3d:B (2.04) BS03 BZT 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=1240000000M^-1
    PDBbind: -logKd/Ki=9.09, Kd=0.81nM
    BindingDB: Ki=2.1nM
    371 1d3p:B (2.1) BS03 BT3 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=24300000M^-1
    PDBbind: -logKd/Ki=7.39, Kd=41nM
    372 1d3q:B (2.9) BS03 BT2 3.4.21.5 GO:0004252 ... P00734 10739244 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    373 1d3v:A (1.7) BS03 ABH 3.5.3.1 GO:0000050 ... P07824 10542097 MOAD: Kd=0.11uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    374 1d4h:A (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    375 1d4h:B (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    376 1d4i:A (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    377 1d4i:B (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    378 1d4j:A (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    379 1d4j:B (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=4.4nM
    PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    380 1d4k:A (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    381 1d4k:B (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    382 1d4l:A (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    383 1d4l:B (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    384 1d4p:B (2.07) BS03 BPP 3.4.21.5 GO:0004252 ... P00734 9232642 MOAD: Ka=2000000M^-1
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    385 1d4y:A (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8893827 MOAD: Ki=0.008nM
    PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    386 1d4y:B (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8893827 PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    387 1d5j:A (2.6) BS06 MM3 3.4.24.17 GO:0004222 ... P08254 10579818 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    388 1d6n:A (2.7) BS02 PPO 2.4.2.8 GO:0000166 ... P00492 10338013 PDBbind: -logKd/Ki=4.50, Ki=31.5uM
    389 1d6s:A (2.3) BS02 PLP 2.5.1.47 GO:0004124 ... P0A1E3 10452898 PDBbind: -logKd/Ki=4.11, Kd=78uM
    390 1d6v:H (2.0) BS01 HOP ? N/A P01857 10651626 MOAD: Kd=670nM
    PDBbind: -logKd/Ki=6.17, Kd=670nM
    391 1d6v:L (2.0) BS01 HOP ? GO:0002250 ... P01834 10651626 PDBbind: -logKd/Ki=6.17, Kd=670nM
    392 1d6w:A (2.0) BS02 00R 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=1100nM
    PDBbind: -logKd/Ki=5.96, Ki=1100nM
    393 1d7i:A (1.9) BS01 DSS 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=250uM
    PDBbind: -logKd/Ki=3.60, Kd=250uM
    394 1d7j:A (1.85) BS01 BUQ 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=500uM
    PDBbind: -logKd/Ki=3.30, Kd=500uM
    395 1d7x:A (2.0) BS06 SPC 3.4.24.17 GO:0004222 ... P08254 10639284 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=19nM
    396 1d7x:B (2.0) BS06 SPC 3.4.24.17 GO:0004222 ... P08254 10639284 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=19nM
    397 1d8f:B (2.4) BS06 SPI 3.4.24.17 GO:0004222 ... P08254 10669564 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    398 1d8m:B (2.44) BS06 BBH 3.4.24.17 GO:0004222 ... P08254 11327577 PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    BindingDB: IC50=3.1nM
    399 1d9i:A (2.3) BS02 00P 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.78nM
    PDBbind: -logKd/Ki=9.11, Ki=0.78nM
    400 1dar:A (2.4) BS01 GDP ? GO:0003746 ... Q5SHN5 8736554 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218