Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1801 1nc3:B (2.2) BS01 FMC 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    1802 1nc6:A (1.9) BS03 ABB 3.4.21.4 GO:0004175 ... P00760 12930148 PDBbind: -logKd/Ki=8.00, Ki=10nM
    1803 1nd5:A (2.9) BS01 2BF 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 12525165 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4nM
    1804 1nde:A (3.0) BS01 MON ? GO:0003677 ... Q92731 12459017 PDBbind: -logKd/Ki=7.82, Ki=15nM
    1805 1ndj:A (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=12.16, Kd~0.69pM
    BindingDB: Kd=1.000000nM
    1806 1ndj:D (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=12.16, Kd~0.69pM
    BindingDB: Kd=1.000000nM
    1807 1ndv:A (2.3) BS02 FR0 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1200nM
    1808 1ndw:A (2.0) BS02 FR2 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=5.9uM
    PDBbind: -logKd/Ki=5.23, Ki=5900nM
    1809 1ndy:A (2.0) BS02 FR3 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=0.68uM
    PDBbind: -logKd/Ki=6.17, Ki=680nM
    1810 1ndz:A (2.0) BS02 FR5 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=7.7nM
    PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    1811 1nf8:A (1.6) BS01 ISC 3.3.2.15 GO:0002047 ... P0DPB9 12741825 MOAD: Kd=0.015uM
    PDBbind: -logKd/Ki=7.82, Kd=0.015uM
    1812 1nfs:A (1.96) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 12540835 MOAD: Kd<0.12nM
    PDBbind: -logKd/Ki=9.92, Kd<0.12nM
    1813 1nfu:A (2.05) BS02 RRP 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: Ki=4nM
    1814 1nfw:A (2.1) BS02 RRR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    BindingDB: Ki=1.1nM
    1815 1nfx:A (2.15) BS02 RDR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    BindingDB: Ki=3.0nM
    1816 1nfy:A (2.1) BS02 RTR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: Ki=1.3nM
    1817 1ng9:A (2.6) BS01 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    1818 1ng9:A (2.6) BS02 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    1819 1ng9:B (2.6) BS01 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    1820 1nhg:A (2.43) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: IC50=49nM
    1821 1nhu:A (2.0) BS01 153 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12509436 MOAD: Ki=2.2uM
    PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    1822 1nhv:A (2.9) BS01 154 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12509436 PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    1823 1nhw:A (2.35) BS02 TCC 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=14.3uM
    PDBbind: -logKd/Ki=4.84, Ki=14.3uM
    1824 1nhx:A (2.1) BS03 FTB 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 14552798 MOAD: ic50=2.11uM
    PDBbind: -logKd/Ki=5.68, IC50=2.11uM
    BindingDB: IC50=2110nM
    1825 1nhz:A (2.3) BS01 486 ? N/A P04150 12686538 PDBbind: -logKd/Ki=6.08, Ki=0.84uM
    BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    1826 1ni1:B (2.3) BS03 2C5 2.5.1.58 GO:0003824 ... Q02293 12699757 MOAD: ic50=0.9nM
    PDBbind: -logKd/Ki=9.05, IC50=0.90nM
    1827 1nj1:A (2.55) BS03 5CA 6.1.1.15 GO:0000166 ... O26708 12578991 PDBbind: -logKd/Ki=7.60, Ki=25nM
    1828 1nj5:A (2.8) BS03 P5A 6.1.1.15 GO:0000166 ... O26708 12578991 PDBbind: -logKd/Ki=7.30, Ki=50nM
    1829 1nja:A (2.5) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    1830 1njb:A (2.74) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8611496 PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    1831 1njc:A (2.5) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=2.8uM
    PDBbind: -logKd/Ki=5.55, Kd=2.8uM
    1832 1njd:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=2.7uM
    PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    1833 1nje:A (2.3) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=160uM
    PDBbind: -logKd/Ki=3.80, Kd=160uM
    1834 1njf:A (2.3) BS02 AGS 2.7.7.7 GO:0003887 ... P06710 12623013 MOAD: Kd=0.62uM
    PDBbind: -logKd/Ki=6.21, Kd=0.62uM
    1835 1njj:A (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    PDBbind: -logKd/Ki=2.10, Ki=8mM
    1836 1njs:A (1.98) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 12755606 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    1837 1nju:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    1838 1nju:B (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    1839 1nk2:P (-1.00) BS01 dna ? GO:0000981 ... P22808 9154919 PDBbind: Kd=0.19nM
    1840 1nk2:P (-1.00) BS02 dna ? GO:0000981 ... P22808 9154919 PDBbind: Kd=0.19nM
    1841 1nki:A (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    1842 1nki:B (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    1843 1nkm:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    1844 1nkp:A (1.8) BS01 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    1845 1nkp:A (1.8) BS02 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    1846 1nkp:B (1.8) BS01 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    1847 1nkp:B (1.8) BS02 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    1848 1nkp:D (1.8) BS01 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    1849 1nkp:D (1.8) BS02 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    1850 1nkp:E (1.8) BS01 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    1851 1nkp:E (1.8) BS02 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    1852 1nl4:B (2.7) BS03 FTL 2.5.1.58 GO:0003824 ... Q02293 12657284 PDBbind: -logKd/Ki=9.41, IC50=0.39nM
    1853 1nl6:A (2.8) BS01 750 3.4.22.38 GO:0006508 ... P43235 11311061 PDBbind: -logKd/Ki=11.32, Ki=4.8pM
    BindingDB: IC50=30nM, Ki=0.0048nM
    1854 1nl9:A (2.4) BS01 989 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    BindingDB: Ki=631nM
    1855 1nli:A (1.93) BS01 ADE 3.2.2.22 GO:0006952 ... P09989 12676436 MOAD: Kd=260uM
    PDBbind: -logKd/Ki=3.59, Kd=260uM
    1856 1nlj:A (2.4) BS01 2CA 3.4.22.38 GO:0006508 ... P43235 11311061 PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    BindingDB: Ki=0.16nM, IC50=70nM
    1857 1nm6:A (1.8) BS02 L86 3.4.21.5 GO:0004252 ... P00734 12873514 MOAD: Ki=0.09nM
    PDBbind: -logKd/Ki=10.05, Ki=0.09nM
    BindingDB: Ki=0.090000nM
    1858 1nmk:A (2.1) BS01 SFM 5.2.1.8 GO:0000413 ... P62937 12656618 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    1859 1nnb:A (2.8) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 8371267 PDBbind: -logKd/Ki=5.00, Ki=10uM
    BindingDB: IC50=13000nM
    1860 1nnj:A (1.9) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 16243784 PDBbind: Kd=6nM
    1861 1nnj:A (1.9) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 16243784 PDBbind: Kd=6nM
    1862 1nnk:A (1.85) BS02 CE2 ? GO:0015276 ... P19491 12593667 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    1863 1nnu:A (2.5) BS02 TCT 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    1864 1nny:A (2.4) BS01 515 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=20nM
    1865 1no6:A (2.4) BS01 794 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=4.41, Ki=39uM
    BindingDB: Ki=39000nM, Kd=26000nM
    1866 1no9:H (1.9) BS02 4ND 3.4.21.5 GO:0004252 ... P00734 12885234 PDBbind: -logKd/Ki=7.62, Ki=24nM
    1867 1noi:A (2.5) BS03 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    1868 1noj:A (2.4) BS04 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    1869 1nok:A (2.4) BS02 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    1870 1nox:A (1.59) BS01 FMN 7.1.1.2 GO:0008137 ... Q60049 8846223 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    1871 1npa:A (2.0) BS01 3NH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9258349 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1872 1npa:B (2.0) BS01 3NH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9258349 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1873 1npv:A (2.0) BS01 L27 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    1874 1npv:B (2.0) BS01 L27 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    1875 1npw:A (2.0) BS01 LGZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1876 1npw:B (2.0) BS01 LGZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1877 1npz:A (2.0) BS01 C1P 3.4.22.27 GO:0006508 ... P25774 12641451 PDBbind: -logKd/Ki=7.89, Ki=13nM
    1878 1nq0:A (2.4) BS01 4HY ? GO:0003677 ... P10828 12511610 PDBbind: -logKd/Ki=10.32, IC50=0.048nM
    BindingDB: IC50=0.0407nM
    1879 1nq7:A (1.5) BS02 ARL ? GO:0003677 ... P45446 12958591 MOAD: Ki=0.16uM
    PDBbind: -logKd/Ki=6.80, Ki=0.16uM
    1880 1nqc:A (1.8) BS01 C4P 3.4.22.27 GO:0006508 ... P25774 12641451 PDBbind: -logKd/Ki=7.30, Ki=50nM
    1881 1nt1:A (2.0) BS02 T76 3.4.21.5 GO:0004252 ... P00734 12873514 MOAD: Ki=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: Ki=1.3nM
    1882 1ntk:C (2.6) BS03 AY1 ? GO:0005739 ... P00157 12885240 PDBbind: -logKd/Ki=10.49, Kd=32pM
    1883 1nu1:C (3.2) BS03 QNO ? GO:0005739 ... P00157 12885240 PDBbind: -logKd/Ki=7.19, Kd=64nM
    1884 1nu3:A (1.75) BS01 VPR 3.3.2.8 GO:0016787 ... Q9ZAG3 12773375 PDBbind: -logKd/Ki=4.00, Ki=100uM
    1885 1nvq:A (2.0) BS02 UCN 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=5.6nM
    PDBbind: -logKd/Ki=8.25, Ki=5.6nM
    BindingDB: IC50=9.9nM, Ki=5.6nM
    1886 1nvr:A (1.8) BS02 STU 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=7.8nM
    PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    1887 1nvs:A (1.8) BS02 UCM 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: IC50=15nM
    1888 1nw4:A (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    PDBbind: -logKd/Ki=9.07, Kd=860pM
    1889 1nw4:B (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    PDBbind: -logKd/Ki=9.07, Kd=860pM
    1890 1nw5:A (2.05) BS01 SAM 2.1.1.72 GO:0003676 ... P14751 12732637 MOAD: Kd=6.1uM
    PDBbind: -logKd/Ki=5.21, Kd=6.1uM
    1891 1nw7:A (2.1) BS02 SAH 2.1.1.72 GO:0003676 ... P14751 12732637 MOAD: Kd=8.1uM
    PDBbind: -logKd/Ki=5.09, Kd=8.1uM
    1892 1nwl:A (2.4) BS01 964 3.1.3.48 GO:0004725 ... P18031 12733877 PDBbind: -logKd/Ki=2.39, Ki=4.1mM
    1893 1nxy:A (1.6) BS01 SM2 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=7.19, Ki=64nM
    1894 1nxy:A (1.6) BS02 SM2 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=7.19, Ki=64nM
    1895 1ny0:A (1.75) BS01 NBF 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1896 1nym:A (1.2) BS01 CXB 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    1897 1nyx:A (2.65) BS01 DRF ? GO:0003677 ... P37231 12672231 PDBbind: -logKd/Ki=7.04, IC50=0.092uM
    BindingDB: EC50=575nM, Ki=90nM
    1898 1nyy:A (1.9) BS01 105 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=4.68, Ki=21uM
    1899 1nz7:A (2.4) BS01 901 3.1.3.48 GO:0004725 ... P18031 12749891 PDBbind: -logKd/Ki=7.12, Ki=0.076uM
    BindingDB: Ki=76nM
    1900 1nzq:H (2.18) BS03 162 3.4.21.5 GO:0004252 ... P00734 12781189 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    1901 1o0d:H (2.44) BS02 163 3.4.21.5 GO:0004252 ... P00734 12781189 MOAD: ic50=6.2nM
    PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    1902 1o0f:A (1.5) BS01 A3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    1903 1o0h:A (1.2) BS01 ADP 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    1904 1o0m:A (1.5) BS01 U2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    BindingDB: Ki=11600nM
    1905 1o0n:A (1.5) BS01 U3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=82uM
    PDBbind: -logKd/Ki=4.09, Ki=82uM
    BindingDB: Ki=78500nM
    1906 1o0o:A (1.2) BS01 A2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=8uM
    PDBbind: -logKd/Ki=5.10, Ki=8uM
    1907 1o1s:B (2.3) BS02 1NH 2.5.1.58 GO:0003824 ... Q02293 12667062 MOAD: Ki=49nM
    PDBbind: -logKd/Ki=7.31, Ki=49nM
    1908 1o2g:H (1.58) BS02 696 3.4.21.5 GO:0004252 ... P00734 12742021 MOAD: Ki=0.76uM
    PDBbind: -logKd/Ki=6.12, Ki=0.76uM
    BindingDB: Ki=760nM
    1909 1o2h:A (1.77) BS02 CR3 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.068uM
    PDBbind: -logKd/Ki=7.17, Ki=0.068uM
    BindingDB: Ki=68nM
    1910 1o2j:A (1.65) BS02 656 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    1911 1o2k:A (1.63) BS02 656 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    1912 1o2n:A (1.5) BS02 762 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.81uM
    PDBbind: -logKd/Ki=6.09, Ki=0.81uM
    1913 1o2o:A (1.63) BS02 950 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.44uM
    PDBbind: -logKd/Ki=6.36, Ki=0.44uM
    1914 1o2p:A (1.47) BS02 972 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=4.85, Ki=14uM
    1915 1o2q:A (1.5) BS02 991 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.021uM
    PDBbind: -logKd/Ki=7.68, Ki=0.021uM
    BindingDB: Ki=21nM
    1916 1o2r:A (1.45) BS02 CR9 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=5.21, Ki=6.1uM
    1917 1o2s:A (1.65) BS02 CR4 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=3.4uM
    PDBbind: -logKd/Ki=5.47, Ki=3.4uM
    1918 1o2t:A (1.62) BS02 783 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=7.85, Ki=0.014uM
    BindingDB: Ki=14nM
    1919 1o2u:A (1.41) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1920 1o2v:A (1.5) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1921 1o2w:A (1.38) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1922 1o2x:A (1.46) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1923 1o2y:A (1.45) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1924 1o2z:A (1.65) BS02 312 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.78uM
    PDBbind: -logKd/Ki=6.11, Ki=0.78uM
    1925 1o30:A (1.55) BS02 693 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    1926 1o32:A (1.78) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    1927 1o33:A (1.46) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    1928 1o34:A (1.5) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    1929 1o35:A (1.41) BS02 802 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=5.00, Ki=10uM
    1930 1o36:A (1.7) BS02 607 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    1931 1o37:A (1.45) BS02 653 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    1932 1o38:A (1.38) BS02 653 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    1933 1o39:A (1.59) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    1934 1o3b:A (1.75) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    1935 1o3c:A (1.64) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    1936 1o3d:A (1.33) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    1937 1o3e:A (1.64) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    1938 1o3f:A (1.55) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    1939 1o3g:A (1.55) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    1940 1o3h:A (1.53) BS02 907 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: Ki=50nM
    1941 1o3i:A (1.51) BS02 907 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: Ki=50nM
    1942 1o3j:A (1.4) BS02 334 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    1943 1o3k:A (1.43) BS02 334 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    1944 1o3l:A (1.4) BS02 678 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    1945 1o3p:B (1.81) BS02 655 3.4.21.73 GO:0004252 ... P00749 12742021 MOAD: Ki=0.22uM
    PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    1946 1o3s:A (3.0) BS01 dna ? GO:0003677 ... P0ACJ8 11724533 PDBbind: Kd=14pM
    1947 1o3s:A (3.0) BS02 dna ? GO:0003677 ... P0ACJ8 11724533 PDBbind: Kd=14pM
    1948 1o41:A (1.7) BS01 300 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.05, IC50=0.9mM
    BindingDB: IC50=900000nM
    1949 1o42:A (1.7) BS01 843 2.7.10.2 N/A P12931 14613321 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=9nM
    1950 1o43:A (1.5) BS01 821 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    1951 1o44:A (1.7) BS01 852 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    1952 1o45:A (1.8) BS01 687 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=9.60, IC50=0.25nM
    BindingDB: IC50=0.25nM
    1953 1o46:A (2.0) BS01 903 2.7.10.2 N/A P12931 14613321 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    1954 1o47:A (1.8) BS01 822 2.7.10.2 N/A P12931 14613321 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=5nM
    1955 1o48:A (1.55) BS01 853 2.7.10.2 N/A P12931 14613321 MOAD: ic50=450nM
    PDBbind: -logKd/Ki=6.35, IC50=450nM
    BindingDB: IC50=450nM
    1956 1o49:A (1.7) BS01 493 2.7.10.2 N/A P12931 14613321 MOAD: ic50=437nM
    PDBbind: -logKd/Ki=6.36, IC50=437nM
    1957 1o4a:A (1.5) BS01 197 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=6.92, IC50=120nM
    1958 1o4b:A (1.85) BS01 876 2.7.10.2 N/A P12931 14613321 MOAD: ic50=2000nM
    PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM
    1959 1o4d:A (1.85) BS01 262 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    BindingDB: IC50=200000nM
    1960 1o4e:A (2.0) BS01 299 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.30, IC50=0.5mM
    BindingDB: IC50=39000nM
    1961 1o4f:A (2.0) BS01 790 2.7.10.2 N/A P12931 14613321 MOAD: ic50=0.3mM
    PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    1962 1o4g:A (1.55) BS01 I59 2.7.10.2 N/A P12931 14613321 MOAD: ic50>5mM
    PDBbind: -logKd/Ki=2.30, IC50>5mM
    1963 1o4h:A (2.25) BS01 772 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.6mM
    PDBbind: -logKd/Ki=2.44, IC50=3.6mM
    1964 1o4i:A (1.75) BS01 219 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=2.64, IC50=2.3mM
    BindingDB: IC50=2300000nM
    1965 1o4j:A (1.7) BS01 IS2 2.7.10.2 N/A P12931 14613321 MOAD: ic50=4.4mM
    PDBbind: -logKd/Ki=2.36, IC50=4.4mM
    BindingDB: IC50=4400000nM
    1966 1o4k:A (1.57) BS01 PSN 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    1967 1o4n:A (1.6) BS01 OXD 2.7.10.2 N/A P12931 14613321 MOAD: ic50>40mM
    PDBbind: -logKd/Ki=1.40, IC50>40mM
    1968 1o4o:A (1.7) BS01 HPS 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.5mM
    PDBbind: -logKd/Ki=2.46, IC50=3.5mM
    BindingDB: IC50=5000000nM
    1969 1o4o:A (1.7) BS02 HPS 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.5mM
    PDBbind: -logKd/Ki=2.46, IC50=3.5mM
    BindingDB: IC50=5000000nM
    1970 1o4p:A (1.9) BS01 791 2.7.10.2 N/A P12931 14613321 MOAD: ic50=2.5mM
    PDBbind: -logKd/Ki=2.60, IC50=2.5mM
    BindingDB: IC50=200000nM
    1971 1o4q:A (1.7) BS01 256 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.2mM
    PDBbind: -logKd/Ki=2.49, IC50=3.2mM
    BindingDB: IC50=3230000000nM
    1972 1o4r:A (1.5) BS01 787 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.9mM
    PDBbind: -logKd/Ki=2.41, IC50=3.9mM
    1973 1o5a:B (1.68) BS02 696 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=0.38uM
    PDBbind: -logKd/Ki=6.42, Ki=0.38uM
    BindingDB: Ki=72nM
    1974 1o5b:B (1.85) BS02 ESI 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    BindingDB: Ki=210nM
    1975 1o5c:B (1.63) BS02 CR9 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6.0uM
    BindingDB: Ki=30nM
    1976 1o5e:H (1.75) BS01 132 3.4.21.106 GO:0004252 ... P05981 15522303 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    BindingDB: Ki=1800nM
    1977 1o5f:H (1.78) BS01 CR9 3.4.21.106 GO:0004252 ... P05981 15522303 PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    BindingDB: Ki=850nM
    1978 1o5g:H (1.75) BS02 CR9 3.4.21.5 GO:0004252 ... P00734 15522303 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=11000nM
    1979 1o5m:A (2.3) BS01 336 2.5.1.58
    2.5.1.59    		 GO:0004659 ... Q04631 10377218 PDBbind: -logKd/Ki=8.72, IC50=1.9nM
    BindingDB: IC50=1.9nM
    1980 1o5m:B (2.3) BS03 336 2.5.1.58 GO:0003824 ... Q02293 10377218 MOAD: ic50=1.9nM
    PDBbind: -logKd/Ki=8.72, IC50=1.9nM
    1981 1o5p:A (-1.00) BS01 CHR ? GO:0003677 ... P0A3R9 15640161 PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    1982 1o5r:A (2.35) BS02 FR9 3.5.4.4 GO:0004000 ... P56658 15239652 MOAD: Ki=7.5nM
    PDBbind: -logKd/Ki=8.12, Ki=7.5nM
    1983 1o6h:A (2.8) BS02 W37 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=6.73, IC50=186nM
    1984 1o6i:A (1.7) BS01 0HZ 3.2.1.14 GO:0004553 ... P11797 12323074 MOAD: Ki=0.65mM
    PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    1985 1o6q:A (2.8) BS02 R17 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=7.64, IC50=23nM
    1986 1o6r:A (2.7) BS02 R19 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=7.10, IC50=80nM
    1987 1o79:A (2.8) BS01 R23 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=6.39, IC50=406nM
    1988 1o7o:A (1.97) BS04 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    PDBbind: -logKd/Ki=4.49, Kd=0.032mM
    1989 1o86:A (2.0) BS03 LPR 3.4.15.1 GO:0006508 ... P12821 12540854 PDBbind: -logKd/Ki=9.57, Ki=0.27nM
    BindingDB: IC50=1.2nM
    1990 1o9e:A (2.6) BS01 FSC ? GO:0005737 ... P93343 12606564 PDBbind: -logKd/Ki=4.18, Kd=66uM
    1991 1oar:H (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    1992 1oar:L (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=7.40, Kd=40nM
    1993 1oau:H (1.8) BS01 DNF N/A N/A N/A 12610298 PDBbind: -logKd/Ki=7.70, Kd=20nM
    1994 1oau:L (1.8) BS01 DNF ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=7.70, Kd=20nM
    1995 1oay:H (2.66) BS01 FUR N/A N/A N/A 12610298 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    1996 1oay:L (2.66) BS01 FUR ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    1997 1oba:A (2.45) BS01 CHT 3.2.1.17 GO:0003796 ... P15057 14527392 MOAD: Kd=3.6mM
    PDBbind: -logKd/Ki=2.44, Kd=3.6mM
    1998 1oba:A (2.45) BS02 CHT 3.2.1.17 GO:0003796 ... P15057 14527392 MOAD: Kd=3.6mM
    PDBbind: -logKd/Ki=2.44, Kd=3.6mM
    1999 1ocn:A (1.31) BS01 IFM 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    2000 1ocn:A (1.31) BS02 BGC 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218