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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 10gs:A (2.2) BS01 VWW 2.5.1.18 GO:0000302 ... P09211 9398518 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=420nM
    2 10gs:B (2.2) BS01 VWW 2.5.1.18 GO:0000302 ... P09211 9398518 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=420nM
    3 11gs:A (2.3) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9426214 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    4 11gs:A (2.3) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9426214 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: IC50=2.6e+4nM
    5 11gs:B (2.3) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9426214 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    6 11gs:B (2.3) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9426214 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: IC50=2.6e+4nM
    7 13gs:A (1.9) BS02 SAS 2.5.1.18 GO:0000302 ... P09211 10452896 MOAD: Ki=24uM
    PDBbind: -logKd/Ki=4.62, Ki=24uM
    8 16pk:A (1.6) BS01 BIS 2.7.2.3 GO:0004618 ... P07378 9642090 PDBbind: -logKd/Ki=5.22, Ki=6uM
    9 184l:A (1.8) BS01 I4B 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Ka=51000M^-1
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    10 185l:A (1.8) BS01 IND 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=289uM
    PDBbind: -logKd/Ki=3.54, Kd=290uM
    11 186l:A (1.8) BS01 N4B 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    12 187l:A (1.8) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=422uM
    PDBbind: -logKd/Ki=3.37, Kd=422uM
    BindingDB: Kd=151000nM
    13 188l:A (1.8) BS01 OXE 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=469uM
    PDBbind: -logKd/Ki=3.33, Kd=470uM
    14 1a0q:H (2.3) BS02 HEP ? N/A P01869 9753552 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    15 1a0q:L (2.3) BS02 HEP ? GO:0005576 ... P01837 9753552 PDBbind: -logKd/Ki=7.57, Ki=27nM
    16 1a28:A (1.8) BS01 STR ? N/A P06401 9620806 MOAD: Ki=5.1nM
    PDBbind: -logKd/Ki=8.29, Ki=5.1nM
    BindingDB: Ki=3.5nM, EC50=2.9nM, IC50=>10000nM
    17 1a42:A (2.25) BS02 BZU 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9541386 PDBbind: -logKd/Ki=9.89, Kd=0.13nM
    18 1a46:H (2.12) BS03 00K 3.4.21.5 GO:0004252 ... P00734 10212123 PDBbind: -logKd/Ki=5.70, Ki=2000nM
    19 1a4g:A (2.2) BS02 ZMR 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    20 1a4h:A (2.5) BS01 GDM ? GO:0005524 ... P02829 9230303 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    21 1a4k:B (2.4) BS01 FRA N/A N/A N/A 9506942 MOAD: Kd=0.01uM
    PDBbind: -logKd/Ki=8.00, Kd=0.01uM
    22 1a4m:A (1.95) BS02 PRH 3.5.4.4 GO:0000255 ... P03958 9622483 MOAD: Ki~0.1pM
    PDBbind: -logKd/Ki=13.00, Ki~0.1pM
    23 1a4q:A (1.9) BS02 DPC 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=3.6uM
    PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    24 1a4r:B (2.5) BS01 GNH 3.6.5.2 GO:0000139 ... P60953 10211824 MOAD: Kd=0.22uM
    PDBbind: -logKd/Ki=6.66, Kd=0.22uM
    25 1a4w:H (1.8) BS03 QWE 3.4.21.5 GO:0004252 ... P00734 8913620 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    26 1a50:A (2.3) BS01 FIP 4.2.1.20 GO:0000162 ... P00929 9548921 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    27 1a52:A (2.8) BS01 EST ? N/A P03372 9600906 PDBbind: -logKd/Ki=9.86, Ki=0.138nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    28 1a5g:H (2.06) BS03 00L 3.4.21.5 GO:0004252 ... P00734 10212123 PDBbind: -logKd/Ki=10.15, Ki=0.071nM
    29 1a5h:A (2.9) BS02 BBA 3.4.21.68 GO:0004252 ... P00750 9268299 PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    30 1a5v:A (1.9) BS02 Y3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... O92956 9560188 MOAD: ic50=800uM
    PDBbind: -logKd/Ki=3.10, IC50=800uM
    31 1a61:H (2.2) BS03 00N 3.4.21.5 GO:0004252 ... P00734 10212123 PDBbind: -logKd/Ki=8.62, Ki=2.4nM
    32 1a69:A (2.1) BS01 FMB 2.4.2.1 GO:0003824 ... P0ABP8 9653038 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    33 1a69:C (2.1) BS01 FMB 2.4.2.1 GO:0003824 ... P0ABP8 9653038 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    34 1a7x:A (2.0) BS01 FKA 5.2.1.8 GO:0000413 ... P62942 9871618 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    35 1a7x:B (2.0) BS01 FKA 5.2.1.8 GO:0000413 ... P62942 9871618 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    36 1a85:A (2.0) BS05 0DY 3.4.24.34 GO:0004222 ... P22894 9655333 PDBbind: -logKd/Ki=4.52, IC50=30uM
    BindingDB: Ki=26000nM
    37 1a86:A (2.0) BS01 0ZB 3.4.24.34 GO:0004222 ... P22894 9655333 PDBbind: -logKd/Ki=4.00, IC50=101uM
    BindingDB: Ki=88000nM
    38 1a8i:A (1.78) BS01 GLS 2.4.1.1 GO:0000166 ... P00489 9568898 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    BindingDB: Ki=3100nM, IC50=3100nM
    39 1a8t:A (2.55) BS03 061 3.5.2.6 GO:0008270 ... P25910 9545432 PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    40 1a94:A (2.0) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 9521772 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    41 1a94:B (2.0) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 9521772 PDBbind: -logKd/Ki=7.85, Ki=14nM
    42 1a99:A (2.2) BS01 PUT ? GO:0015846 ... P31133 9651355 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    43 1a9m:A (2.3) BS01 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9450540 PDBbind: -logKd/Ki=6.92, Ki=119nM
    44 1a9m:B (2.3) BS01 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9450540 MOAD: Ki=119nM
    PDBbind: -logKd/Ki=6.92, Ki=119nM
    45 1a9q:A (2.0) BS01 HPA 2.4.2.1 GO:0003824 ... P55859 9585525 PDBbind: -logKd/Ki=6.17, Kd=0.68uM
    BindingDB: Kd=680nM
    46 1a9u:A (2.5) BS01 SB2 2.7.11.24 GO:0000077 ... Q16539 9753691 PDBbind: -logKd/Ki=7.32, IC50=0.048uM
    47 1aaq:A (2.5) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 1637805 PDBbind: -logKd/Ki=8.40, Ki=4.0nM
    48 1aaq:B (2.5) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 1637805 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.40, Ki=4.0nM
    49 1abf:A (1.9) BS01 FCA ? GO:0015407 ... P02924 2818726 MOAD: Kd=3.8uM
    PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    50 1acj:A (2.8) BS01 THA 3.1.1.7 GO:0001507 ... P04058 8415649 PDBbind: -logKd/Ki=8.09, IC50=8.2nM
    BindingDB: IC50=29nM, Ki=40nM
    51 1ad8:H (2.0) BS03 MDL 3.4.21.5 GO:0004252 ... P00734 9033393 PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    52 1add:A (2.4) BS02 1DA 3.5.4.4 GO:0000255 ... P03958 8439534 MOAD: Ki=0.18uM
    PDBbind: -logKd/Ki=6.74, Ki=0.18uM
    53 1adl:A (1.6) BS01 ACD ? GO:0005324 ... P04117 7929228 MOAD: Kd=4.4uM
    PDBbind: -logKd/Ki=5.36, Kd=4.4uM
    54 1af2:A (2.3) BS02 U 3.5.4.5 GO:0001884 ... P0ABF6 9125497 PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    55 1af6:A (2.4) BS01 GLC ? GO:0001618 ... P02943 9299337 PDBbind: -logKd/Ki=1.82, Kd=15mM
    56 1af6:B (2.4) BS01 GLC ? GO:0001618 ... P02943 9299337 PDBbind: -logKd/Ki=1.82, Kd=15mM
    57 1afk:A (1.7) BS01 PAP 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=240nM
    PDBbind: -logKd/Ki=6.62, Ki=240nM
    58 1afl:A (1.7) BS01 ATR 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=520nM
    PDBbind: -logKd/Ki=6.28, Ki=520nM
    59 1ag9:A (1.8) BS02 FMN ? GO:0000166 ... P61949 9416602 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    60 1ag9:B (1.8) BS02 FMN ? GO:0000166 ... P61949 9416602 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    61 1agw:A (2.4) BS01 SU2 2.7.10.1 GO:0004672 ... P11362 9139660 PDBbind: -logKd/Ki=4.70, IC50=20uM
    62 1aht:H (1.6) BS03 APA 3.4.21.5 GO:0004252 ... P00734 7574675 PDBbind: -logKd/Ki=6.21, Ki=0.62uM
    63 1ahx:A (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    PDBbind: -logKd/Ki=3.92, Kd=120uM
    64 1ahx:B (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    PDBbind: -logKd/Ki=3.92, Kd=120uM
    65 1ai4:B (2.35) BS02 DHY 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=3.13mM
    PDBbind: -logKd/Ki=2.50, Ki=3.13mM
    66 1ai5:B (2.36) BS02 MNP 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=0.189mM
    PDBbind: -logKd/Ki=3.72, Ki=0.189mM
    67 1ai6:B (2.55) BS02 4HP 3.5.1.11 GO:0016787 ... P06875 9813130 PDBbind: -logKd/Ki=3.97, Ki=0.107mM
    68 1aid:A (2.2) BS01 THK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 8340363 PDBbind: -logKd/Ki=4.82, Ki=15uM
    69 1aid:B (2.2) BS01 THK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 8340363 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    70 1aj6:A (2.3) BS01 NOV 5.6.2.2 GO:0003677 ... P0AES6 9245398 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    BindingDB: IC50=170nM, Kd=7.0nM, Ki=7.0nM
    71 1aj7:H (2.1) BS01 NPE ? N/A P01857 9180069 MOAD: Kd=135uM
    PDBbind: -logKd/Ki=3.87, Kd=135uM
    72 1aj7:L (2.1) BS01 NPE N/A N/A N/A 9180069 PDBbind: -logKd/Ki=3.87, Kd=135uM
    73 1ajn:B (2.36) BS02 AAN 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=2.32mM
    PDBbind: -logKd/Ki=2.63, Ki=2.32mM
    74 1ajp:B (2.31) BS01 OMD 3.5.1.11 GO:0016787 ... P06875 9813130 PDBbind: -logKd/Ki=2.23, Ki=5.85mM
    75 1ajq:B (2.05) BS02 SPA 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=0.049mM
    PDBbind: -logKd/Ki=4.31, Ki=0.049mM
    76 1ajv:A (2.0) BS01 NMB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 MOAD: Ki=19.1nM
    PDBbind: -logKd/Ki=7.72, Ki=19.1nM
    77 1ajv:B (2.0) BS01 NMB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 PDBbind: -logKd/Ki=7.72, Ki=19.1nM
    78 1ajx:A (2.0) BS01 AH1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 MOAD: Ki=12.2nM
    PDBbind: -logKd/Ki=7.91, Ki=12.2nM
    79 1ajx:B (2.0) BS01 AH1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 PDBbind: -logKd/Ki=7.91, Ki=12.2nM
    80 1akq:A (1.9) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=0.79nM
    PDBbind: -logKd/Ki=9.10, Kd=0.79nM
    81 1akr:A (1.58) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=0.82nM
    PDBbind: -logKd/Ki=9.09, Kd=0.82nM
    82 1akt:A (1.8) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    83 1aku:A (1.9) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=746nM
    PDBbind: -logKd/Ki=6.13, Kd=746nM
    84 1akv:A (2.0) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=0.0026nM
    PDBbind: -logKd/Ki=11.59, Kd=0.0026nM
    85 1akw:A (1.75) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=2.6nM
    PDBbind: -logKd/Ki=8.59, Kd=2.6nM
    86 1al7:A (2.6) BS02 HST 1.1.3.15 GO:0003973 ... P05414 9144771 PDBbind: -logKd/Ki=7.80, Ki=16nM
    87 1al8:A (2.2) BS02 DHP 1.1.3.15 GO:0003973 ... P05414 9144771 MOAD: Ki=4.8uM
    PDBbind: -logKd/Ki=5.32, Ki=4.8uM
    88 1alw:A (2.03) BS05 ISA ? GO:0005509 ... P04574 9228946 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    89 1amk:A (1.83) BS01 PGA 5.3.1.1 GO:0004807 ... P48499 10235625 MOAD: Ki=0.05mM
    PDBbind: -logKd/Ki=4.30, Ki=50uM
    90 1amn:A (2.8) BS01 NAF 3.1.1.7 GO:0001507 ... P04058 N/A PDBbind: -logKd/Ki=13.82, Ki=15fM
    91 1amw:A (1.85) BS01 ADP ? GO:0005524 ... P02829 9230303 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    92 1ao0:A (2.8) BS04 ADP 2.4.2.14 GO:0000287 ... P00497 9271502 PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    93 1ao0:A (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502 PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    94 1ao0:B (2.8) BS01 ADP 2.4.2.14 GO:0000287 ... P00497 9271502 PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    95 1ao0:B (2.8) BS05 ADP 2.4.2.14 GO:0000287 ... P00497 9271502 PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    96 1ao8:A (-1.00) BS01 MTX 1.5.1.3 GO:0004146 ... P00381 9514736 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=16nM, Ki=0.004000nM
    97 1apb:A (1.76) BS02 FCB ? GO:0015407 ... P02924 2204627 MOAD: Kd=1.51uM
    PDBbind: -logKd/Ki=5.82, Kd=1.51uM
    98 1aq1:A (2.0) BS01 STU 2.7.11.22 GO:0000082 ... P24941 9334743 PDBbind: -logKd/Ki=8.15, IC50=7nM
    99 1aqi:A (2.6) BS01 SAH 2.1.1.72 GO:0003676 ... P14385 8995524 PDBbind: -logKd/Ki=5.62, Kd=2.4uM
    100 1aqj:A (2.6) BS01 SFG 2.1.1.72 GO:0003676 ... P14385 8995524 PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    101 1atr:A (2.34) BS02 ADP 3.6.4.10 GO:0005524 ... P19120 8226982 PDBbind: -logKd/Ki=6.96, Kd=110nM
    102 1au0:A (2.6) BS01 SDK 3.4.22.38 GO:0006508 ... P43235 N/A PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    103 1au2:A (2.6) BS01 POS 3.4.22.38 GO:0006508 ... P43235 N/A PDBbind: -logKd/Ki=7.89, Ki=13nM
    104 1auj:A (2.1) BS01 PPB 3.4.21.4 GO:0004175 ... P00760 9341205 PDBbind: -logKd/Ki=8.25, Ki=5.6nM
    105 1avd:A (2.7) BS01 BTN ? GO:0005576 ... P02701 8515446 PDBbind: -logKd/Ki=15.00, Kd=1fM
    106 1avn:A (2.0) BS03 HSM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9265618 MOAD: Kd=0.125mM
    PDBbind: -logKd/Ki=3.90, Kd=0.125mM
    107 1aw1:A (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062 PDBbind: -logKd/Ki=1.05, Ki=89mM
    108 1aw1:B (2.7) BS01 PGA 5.3.1.1 GO:0004807 ... P50921 9442062 PDBbind: -logKd/Ki=1.05, Ki=89mM
    109 1awf:H (2.2) BS03 GR4 3.4.21.5 GO:0004252 ... P00734 9578548 PDBbind: -logKd/Ki=6.01, Ki=0.97uM
    110 1awh:D (3.0) BS01 GR3 3.4.21.5 GO:0004252 ... P00734 9578548 PDBbind: -logKd/Ki=6.08, Ki=0.83uM
    111 1axr:A (2.3) BS02 HTP 2.4.1.1 GO:0000166 ... P00489 N/A MOAD: Ki=540uM
    PDBbind: -logKd/Ki=3.27, Ki=540uM
    112 1axs:H (2.6) BS01 HOP ? N/A P01857 9305839 PDBbind: -logKd/Ki=7.77, Kd=17nM
    113 1axs:L (2.6) BS01 HOP ? GO:0005576 ... Q7Z3Y4 9305839 PDBbind: -logKd/Ki=7.77, Kd=17nM
    114 1axz:A (1.95) BS02 GAL ? GO:0030246 ... P16404 9545381 MOAD: Ka=1570M^-1
    PDBbind: -logKd/Ki=3.20, Kd=0.637mM
    115 1ayu:A (2.2) BS01 INA 3.4.22.38 GO:0006508 ... P43235 9405598 PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.7nM
    116 1ayv:A (2.3) BS01 IN6 3.4.22.38 GO:0006508 ... P43235 9405598 PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=10.0nM
    117 1azl:A (1.8) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    118 1azm:A (2.0) BS02 AZM 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 7932756 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: Ki=250nM, Kd=1400nM, IC50=5.8nM
    119 1b0f:A (3.0) BS02 SEI 3.4.21.37 GO:0000122 ... P08246 9651152 PDBbind: -logKd/Ki=7.70, Ki=20nM
    BindingDB: Ki=25nM
    120 1b11:A (1.9) BS01 3TL 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 10651036 MOAD: Ki=41nM
    PDBbind: -logKd/Ki=7.39, Ki=41nM
    121 1b2i:A (-1.00) BS01 AMH 3.4.21.7 N/A P00747 10625440 PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    122 1b38:A (2.0) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10085115 MOAD: Kd=0.254uM
    PDBbind: -logKd/Ki=6.60, Kd=0.254uM
    123 1b39:A (2.1) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10085115 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.120uM
    124 1b42:A (2.2) BS02 M1A 2.1.1.57 GO:0003746 ... P07617 10377383 MOAD: Kd=97.9uM
    PDBbind: -logKd/Ki=4.01, Kd=97.9uM
    125 1b4d:A (2.0) BS01 CRA 2.4.1.1 GO:0000166 ... P00489 10211820 MOAD: Ki=15.6uM
    PDBbind: -logKd/Ki=4.81, Ki=15.6uM
    BindingDB: Ki=16000nM
    126 1b55:A (2.4) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    127 1b55:B (2.4) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    128 1b57:A (2.0) BS04 PGH 4.1.2.13 GO:0004332 ... P0AB71 10080900 PDBbind: -logKd/Ki=8.00, Ki=0.01uM
    129 1b57:B (2.0) BS04 PGH 4.1.2.13 GO:0004332 ... P0AB71 10080900 PDBbind: -logKd/Ki=8.00, Ki=0.01uM
    130 1b5g:H (2.07) BS03 0ZE 3.4.21.5 GO:0004252 ... P00734 10212123 PDBbind: -logKd/Ki=8.00, Ki=10nM
    131 1b69:A (-1.00) BS01 dna ? GO:0003677 ... P22886 10201406 PDBbind: Kd=151nM
    132 1b69:A (-1.00) BS02 dna ? GO:0003677 ... P22886 10201406 PDBbind: Kd=151nM
    133 1b6k:A (1.85) BS01 PI5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    134 1b6k:B (1.85) BS01 PI5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    135 1b6l:A (1.75) BS01 PI4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    136 1b6l:B (1.75) BS01 PI4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 PDBbind: -logKd/Ki=8.30, Ki=5nM
    137 1b6m:A (1.85) BS01 PI6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 PDBbind: -logKd/Ki=8.40, Ki=4nM
    138 1b6m:B (1.85) BS01 PI6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    139 1b6p:A (2.0) BS01 PI7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    140 1b6p:B (2.0) BS01 PI7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 PDBbind: -logKd/Ki=8.52, Ki=3nM
    141 1b74:A (2.3) BS01 DGN 5.1.1.3 GO:0008360 ... P56868 10331867 MOAD: Ki=50mM
    PDBbind: -logKd/Ki=1.30, Ki=50mM
    142 1b8n:A (2.0) BS01 IMG 2.4.2.1 GO:0003824 ... P55859 12463747 MOAD: Ki=30pM
    PDBbind: -logKd/Ki=10.52, Ki=30pM
    BindingDB: Ki=0.030000nM
    143 1b8o:A (1.5) BS02 IMH 2.4.2.1 GO:0003824 ... P55859 11170405 MOAD: Ki=23pM
    PDBbind: -logKd/Ki=10.64, Ki=23pM
    144 1b8y:A (2.0) BS06 IN7 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    145 1b9s:A (2.5) BS02 FDI 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50>667uM
    PDBbind: -logKd/Ki=3.18, IC50>667uM
    BindingDB: IC50=670000nM
    146 1b9t:A (2.4) BS02 RAI 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50=8uM
    PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    147 1b9v:A (2.35) BS02 RA2 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50=224uM
    PDBbind: -logKd/Ki=3.65, IC50=224uM
    BindingDB: IC50=271000nM
    148 1ba8:B (1.8) BS02 0IT 3.4.21.5 GO:0004252 ... P00734 9724521 PDBbind: -logKd/Ki=9.00, Ki=1.0nM
    149 1bai:A (2.4) BS01 0Q4 3.4.23.- GO:0004190 ... P03322 9521772 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    150 1bai:B (2.4) BS01 0Q4 3.4.23.- GO:0004190 ... P03322 9521772 PDBbind: -logKd/Ki=7.70, Ki=20nM
    151 1bap:A (1.75) BS02 ARB ? GO:0015407 ... P02924 2204627 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    152 1bb0:B (2.1) BS03 0IV 3.4.21.5 GO:0004252 ... P00734 9724521 PDBbind: -logKd/Ki=8.36, Ki=4.4nM
    BindingDB: IC50=28.8nM
    153 1bcd:A (1.9) BS02 FMS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8070585 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Kd=130nM, IC50=13nM
    154 1bcu:H (2.0) BS03 PRL 3.4.21.5 GO:0004252 ... P00734 9559654 MOAD: Kd=0.53mM
    PDBbind: -logKd/Ki=3.28, Kd=0.53mM
    BindingDB: IC50=12000nM
    155 1bdh:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 N/A PDBbind: Kd=900nM
    156 1bdi:A (3.0) BS01 dna ? GO:0000976 ... P0ACP7 N/A PDBbind: Kd=2.5nM
    157 1bdl:A (2.8) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 PDBbind: -logKd/Ki=5.85, Ki=1.41uM
    158 1bdl:B (2.8) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 PDBbind: -logKd/Ki=5.85, Ki=1.41uM
    159 1bdq:A (2.5) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    160 1bdq:B (2.5) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 MOAD: Ki=460nM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    161 1bdr:A (2.8) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 PDBbind: -logKd/Ki=6.68, Ki=0.21uM
    162 1bdr:B (2.8) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 PDBbind: -logKd/Ki=6.68, Ki=0.21uM
    163 1bdt:A (2.5) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    164 1bdt:A (2.5) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    165 1bdt:B (2.5) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    166 1bdt:B (2.5) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    167 1bdt:C (2.5) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    168 1bdt:C (2.5) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    169 1bdt:D (2.5) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    170 1bdt:D (2.5) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=12pM
    171 1bdv:A (2.8) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    172 1bdv:A (2.8) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    173 1bdv:B (2.8) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    174 1bdv:B (2.8) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    175 1bdv:C (2.8) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    176 1bdv:C (2.8) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    177 1bdv:D (2.8) BS01 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    178 1bdv:D (2.8) BS02 dna ? GO:0003677 ... P03050 9927650 PDBbind: Kd=17nM
    179 1bgo:A (2.3) BS01 I10 3.4.22.38 GO:0006508 ... P43235 N/A PDBbind: -logKd/Ki=8.46, Ki=3.5nM
    180 1bgq:A (2.5) BS01 RDC ? GO:0005524 ... P02829 9925731 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    BindingDB: IC50=2e+2nM
    181 1bhx:B (2.3) BS02 R56 3.4.21.5 GO:0004252 ... P00734 9733491 PDBbind: -logKd/Ki=6.84, Ki=0.145uM
    BindingDB: Ki=145nM
    182 1bhx:F (2.3) BS01 R56 3.4.21.5 GO:0004252 ... P00734 9733491 MOAD: Ki=0.145uM
    PDBbind: -logKd/Ki=6.84, Ki=0.145uM
    BindingDB: Ki=145nM
    183 1bil:A (2.4) BS01 0IU 3.4.23.15 GO:0004190 ... P00797 7493993 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    184 1bim:A (2.8) BS01 0QB 3.4.23.15 GO:0004190 ... P00797 7493993 PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    185 1bio:A (1.5) BS01 SOA 3.4.21.46 GO:0004252 ... P00746 9753554 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    186 1biw:B (2.5) BS06 S80 3.4.24.17 GO:0004222 ... P08254 9873489 MOAD: ic50=104nM
    PDBbind: -logKd/Ki=6.98, IC50=104nM
    BindingDB: IC50=104nM
    187 1bji:A (2.0) BS02 DPC 3.2.1.18 GO:0004308 ... P03472 9526556 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    188 1bju:A (1.8) BS03 GP6 3.4.21.4 GO:0004175 ... P00760 9836602 MOAD: Ki=6.2uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    189 1bjv:A (1.8) BS04 GP8 3.4.21.4 GO:0004175 ... P00760 9836602 MOAD: Ki=13uM
    PDBbind: -logKd/Ki=5.54, Ki=2.9uM
    190 1bkj:A (1.8) BS01 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    191 1bkj:A (1.8) BS02 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    192 1bkj:B (1.8) BS01 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    193 1bkj:B (1.8) BS02 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    194 1bkm:A (2.0) BS01 1C5 2.7.10.2 N/A P00524 N/A PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    195 1bky:A (2.0) BS02 1MC 2.1.1.57 GO:0003723 ... P07617 10377383 MOAD: Kd=144uM
    PDBbind: -logKd/Ki=3.84, Kd=144uM
    196 1bl4:A (1.9) BS01 AP1 5.2.1.8 GO:0000413 ... P62942 9724721 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=8.2nM
    197 1bl4:B (1.9) BS01 AP1 5.2.1.8 GO:0000413 ... P62942 9724721 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=8.2nM
    198 1bl6:A (2.5) BS01 SB6 2.7.11.24 GO:0000077 ... Q16539 9753691 PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    BindingDB: IC50=160nM
    199 1bl7:A (2.5) BS01 SB4 2.7.11.24 GO:0000077 ... Q16539 9753691 PDBbind: -logKd/Ki=7.72, IC50=0.019uM
    BindingDB: IC50=19nM
    200 1bm6:A (-1.00) BS05 HAV 3.4.24.17 GO:0004222 ... P08254 9760240 PDBbind: -logKd/Ki=7.89, Ki=13nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218