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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16401 4yl1:A (1.41) BS01 4U8 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=2.58uM
    PDBbind: -logKd/Ki=6.67, IC50=0.216uM
    BindingDB: IC50=216nM
    16402 4yl3:A (1.41) BS01 4U9 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=3.94uM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    16403 4ylk:A (1.4) BS01 4E2 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 25730262 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM
    16404 4yll:A (1.4) BS01 4E3 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 25730262 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    16405 4ymb:A (1.93) BS01 4E7 ? GO:0015276 ... P22756 26200741 MOAD: Ki=0.62uM
    PDBbind: -logKd/Ki=6.21, Ki=0.62uM
    16406 4ymb:B (1.93) BS01 4E7 ? GO:0015276 ... P22756 26200741 MOAD: Ki=0.62uM
    16407 4ymg:A (1.899) BS01 SAM ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    16408 4ymg:B (1.899) BS01 SAM ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=21uM
    16409 4ymh:A (1.876) BS01 SAH ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    16410 4ymh:B (1.876) BS01 SAH ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=3.2uM
    16411 4ymh:C (1.876) BS01 SAH ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=3.2uM
    16412 4ymh:D (1.876) BS01 SAH ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=3.2uM
    16413 4ymj:A (2.0) BS01 4EJ 2.7.10.1 GO:0004672 ... Q16288 26005534 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=100nM
    16414 4ymj:B (2.0) BS01 4EJ 2.7.10.1 GO:0004672 ... Q16288 26005534 MOAD: ic50=0.1uM
    BindingDB: IC50=100nM
    16415 4yml:A (1.75) BS01 4F0 3.2.2.9 GO:0003824 ... P0AF12 26260335 MOAD: Ki=4.5nM
    PDBbind: -logKd/Ki=8.35, Ki=4.5nM
    16416 4ymq:A (2.0) BS01 ZBD ? GO:0003677 ... P51449 25840886 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    BindingDB: Kd=1600nM, IC50=5700nM
    16417 4ymx:A (1.481) BS01 ARG ? GO:0015276 ... Q8RCC4 25848002 MOAD: Kd=79nM
    PDBbind: -logKd/Ki=7.10, Kd=79nM
    16418 4ymx:B (1.481) BS01 ARG ? GO:0015276 ... Q8RCC4 25848002 MOAD: Kd=79nM
    16419 4ynb:A (2.0) BS01 4EH 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.043nM
    PDBbind: -logKd/Ki=10.37, Ki=0.043nM
    16420 4yo8:A (2.1) BS01 4EZ 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.030nM
    16421 4yo8:B (2.1) BS01 4EZ 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.030nM
    16422 4yog:A (2.0) BS01 4F5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    16423 4yog:B (2.0) BS01 4F5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    16424 4yoi:A (1.82) BS01 4F4 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, IC50=0.33uM
    16425 4yoi:B (1.82) BS01 4F4 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, IC50=0.33uM
    16426 4yoj:A (1.9) BS01 RFM 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.41uM
    PDBbind: -logKd/Ki=6.39, IC50=0.41uM
    16427 4yoj:B (1.9) BS01 RFM 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.41uM
    PDBbind: -logKd/Ki=6.39, IC50=0.41uM
    16428 4yp5:A (2.21) BS01 NAP 2.7.7.1 GO:0000309 ... O26253 26457427 MOAD: Ki=65uM
    16429 4yp5:B (2.21) BS01 NAP 2.7.7.1 GO:0000309 ... O26253 26457427 MOAD: Ki=65uM
    16430 4yp5:C (2.21) BS01 NAP 2.7.7.1 GO:0000309 ... O26253 26457427 MOAD: Ki=65uM
    16431 4ypq:A (2.32) BS01 4F1 ? GO:0003677 ... P51449 26640126 MOAD: ic50=7nM
    BindingDB: IC50=7.8nM, EC50=16nM
    16432 4yqh:A (2.308) BS03 4F7 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=0.009uM
    BindingDB: IC50=<500nM
    16433 4yqh:B (2.308) BS02 4F7 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.009uM
    BindingDB: IC50=<500nM
    16434 4yrd:A (2.44) BS02 3IT ? GO:0046872 ... A0A0H3JP37 26471247 MOAD: Kd=27uM
    PDBbind: -logKd/Ki=4.57, Kd=27uM
    16435 4yrd:B (2.44) BS02 3IT ? GO:0046872 ... A0A0H3JP37 26471247 MOAD: Kd=27uM
    16436 4ys7:A (2.502) BS02 4GK 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=0.001uM
    BindingDB: IC50=<10nM
    16437 4ys7:B (2.502) BS02 4GK 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.001uM
    BindingDB: IC50=<10nM
    16438 4ysl:A (1.4618) BS02 GSH ? GO:0006749 ... A5VWI3 26082492 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    16439 4ysl:B (1.4618) BS02 GSH ? GO:0006749 ... A5VWI3 26082492 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    16440 4ysx:B (2.25) BS04 E23 1.3.5.1 GO:0005515 ... O44074 26198225 MOAD: ic50=0.0055uM
    16441 4ysx:G (2.25) BS02 E23 ? GO:0005515 ... P92506 26198225 MOAD: ic50=0.0055uM
    16442 4yt6:H (2.07) BS01 4JY 3.4.21.21 GO:0004252 ... P08709 25881820 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    16443 4yt7:H (2.3) BS01 4K1 3.4.21.21 GO:0004252 ... P08709 25881820 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM
    16444 4ytf:A (1.78) BS01 4HZ 2.7.10.2 GO:0004672 ... O60674 26230873 MOAD: Ki=0.007uM
    PDBbind: -logKd/Ki=8.15, Ki=0.007uM
    16445 4yth:A (2.04) BS01 467 2.7.10.2 GO:0004672 ... O60674 26230873 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=0.002uM
    16446 4yua:A (2.0) BS02 REF 2.4.1.1 GO:0000166 ... P00489 25980608 MOAD: Ki=13.4uM
    16447 4yuw:A (1.97) BS02 4JU 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    16448 4yuw:B (1.97) BS02 4JU 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=1.7uM
    16449 4yux:A (1.6) BS02 4JT 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=180uM
    PDBbind: -logKd/Ki=3.74, IC50=180uM
    16450 4yux:B (1.6) BS02 4JT 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=180uM
    16451 4yuy:A (1.58) BS02 1SQ 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=460uM
    PDBbind: -logKd/Ki=3.34, IC50=460uM
    16452 4yuy:B (1.58) BS02 1SQ 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=460uM
    16453 4yuz:B (1.97) BS02 4JV 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=9.1uM
    PDBbind: -logKd/Ki=5.04, IC50=9.1uM
    16454 4yuz:D (1.97) BS02 4JV 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=9.1uM
    16455 4yv0:B (1.95) BS02 4JW 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=530uM
    PDBbind: -logKd/Ki=3.28, IC50=530uM
    16456 4yv0:D (1.95) BS02 4JW 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=530uM
    16457 4yv1:B (1.85) BS02 4K2 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=830uM
    PDBbind: -logKd/Ki=3.08, IC50=830uM
    16458 4yv1:D (1.85) BS02 4K2 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=830uM
    16459 4yv5:A (1.9) BS01 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16460 4yv5:A (1.9) BS02 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16461 4yv5:B (1.9) BS01 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16462 4yv5:B (1.9) BS02 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16463 4yvv:A (2.3) BS02 GBM 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 26362498 MOAD: ic50=3.72uM
    16464 4yvv:B (2.3) BS02 GBM 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 26362498 MOAD: ic50=3.72uM
    16465 4yvx:A (2.3) BS01 GMR 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 26362498 MOAD: ic50=0.85uM
    16466 4yvx:B (2.3) BS01 GMR 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 26362498 MOAD: ic50=0.85uM
    16467 4yvz:A (2.495) BS02 3AT 2.7.7.85 GO:0003677 ... Q9WY43 26014055 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    16468 4yvz:B (2.495) BS01 3AT 2.7.7.85 GO:0003677 ... Q9WY43 26014055 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    16469 4yw7:C (1.82) BS01 4J0 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=130nM
    PDBbind: -logKd/Ki=6.89, Kd=130nM
    16470 4yw7:I (1.82) BS02 4J0 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=130nM
    16471 4yw9:A (1.4) BS04 1WD 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 26322521 MOAD: Ki=45uM
    BindingDB: Ki=8.3e+4nM
    16472 4ywa:A (1.192) BS02 4J9 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    16473 4ywa:C (1.192) BS01 4J9 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=28nM
    16474 4ywu:A (2.4) BS01 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16475 4ywu:B (2.4) BS01 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16476 4ywv:A (2.4) BS01 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16477 4ywv:A (2.4) BS02 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16478 4ywv:B (2.4) BS01 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16479 4ywv:B (2.4) BS02 SSN 1.2.1.79 GO:0000166 ... A0A0J9X1M8 25888791 MOAD: Ki=0.1mM
    16480 4yx4:A (1.01) BS02 FB2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=1073.4nM
    PDBbind: -logKd/Ki=5.97, Kd=1073.4nM
    BindingDB: Ki=1103nM, Kd=1149700nM
    16481 4yx9:A (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    16482 4yx9:B (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    16483 4yx9:C (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    16484 4yx9:D (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    16485 4yxi:A (0.96) BS02 4J8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=318.8nM
    PDBbind: -logKd/Ki=6.50, Kd=318.8nM
    BindingDB: Ki=320nM, Kd=0.060000nM, IC50=580nM
    16486 4yxi:A (0.96) BS03 4J8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=318.8nM
    PDBbind: -logKd/Ki=6.50, Kd=318.8nM
    BindingDB: Ki=320nM, Kd=0.060000nM, IC50=580nM
    16487 4yxo:A (1.06) BS02 4JC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=91.4nM
    PDBbind: -logKd/Ki=7.04, Kd=91.4nM
    BindingDB: Ki=0.05nM, Kd=125400nM
    16488 4yxo:A (1.06) BS03 4JC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=91.4nM
    PDBbind: -logKd/Ki=7.04, Kd=91.4nM
    BindingDB: Ki=0.05nM, Kd=125400nM
    16489 4yxu:A (1.08) BS02 4JE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=57.4nM
    PDBbind: -logKd/Ki=7.24, Kd=57.4nM
    BindingDB: Ki=0.03nM, Kd=57800nM
    16490 4yxu:A (1.08) BS03 4JE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=57.4nM
    PDBbind: -logKd/Ki=7.24, Kd=57.4nM
    BindingDB: Ki=0.03nM, Kd=57800nM
    16491 4yyl:A (1.905) BS01 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16492 4yyl:A (1.905) BS02 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16493 4yyl:A (1.905) BS03 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16494 4yyt:A (1.07) BS01 S2O 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16495 4yyt:A (1.07) BS02 S2O 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16496 4yyt:A (1.07) BS03 S2O 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16497 4yyt:A (1.07) BS04 S2O 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16498 4yz9:A (2.463) BS01 4K7 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 26438213 MOAD: Ki=200nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    16499 4yz9:B (2.463) BS01 4K7 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 26438213 MOAD: Ki=200nM
    16500 4yz9:C (2.463) BS01 4K7 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 26438213 MOAD: Ki=200nM
    16501 4yzc:A (2.494) BS01 STU 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 26438213 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    16502 4yzc:B (2.494) BS01 STU 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 26438213 MOAD: ic50=3nM
    16503 4yzn:A (1.55) BS01 4K5 2.7.11.1 GO:0004672 ... Q6XHB2 25897865 MOAD: ic50=15.4uM
    PDBbind: -logKd/Ki=4.81, IC50=15.4uM
    16504 4yzu:A (1.41) BS01 4K6 3.4.21.22 GO:0004252 ... P00740 25937013 MOAD: Ki=9uM
    PDBbind: -logKd/Ki=5.05, Ki=9uM
    BindingDB: Ki=9000nM
    16505 4z0g:A (1.25) BS01 5GP 1.1.1.205 GO:0003824 ... Q756Z6 26558346 MOAD: Ki=600uM
    16506 4z0g:B (1.25) BS01 5GP 1.1.1.205 GO:0003824 ... Q756Z6 26558346 MOAD: Ki=600uM
    16507 4z0g:B (1.25) BS02 5GP 1.1.1.205 GO:0003824 ... Q756Z6 26558346 MOAD: Ki=600uM
    16508 4z0k:A (1.41) BS01 4LN 3.4.21.22 GO:0004252 ... P00740 25937013 MOAD: Ki=0.462uM
    PDBbind: -logKd/Ki=6.34, Ki=0.462uM
    BindingDB: IC50=507nM
    16509 4z0l:A (2.29) BS02 4LA 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16510 4z0l:A (2.29) BS03 N1B 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16511 4z0l:B (2.29) BS02 4LA 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16512 4z0l:B (2.29) BS03 N1B 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16513 4z0l:C (2.29) BS02 4LA 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16514 4z0l:C (2.29) BS03 N1B 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16515 4z0l:D (2.29) BS02 4LA 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16516 4z0l:D (2.29) BS03 N1B 1.14.99.1 GO:0001516 ... Q05769 26088701 MOAD: ic50=0.051uM
    16517 4z0q:A (1.45) BS02 4K9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26276436 MOAD: Ki=6.8nM
    PDBbind: -logKd/Ki=8.17, Ki=6.8nM
    BindingDB: Ki=6.8nM
    16518 4z1e:A (2.01) BS02 DF5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26276436 MOAD: Ki=5.7nM
    PDBbind: -logKd/Ki=8.24, Ki=5.7nM
    16519 4z1j:A (1.27) BS02 4KC 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26276436 MOAD: Ki=7.7nM
    PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    BindingDB: Ki=7.7nM
    16520 4z1k:A (1.35) BS02 4KB 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26276436 MOAD: Ki=4.7nM
    PDBbind: -logKd/Ki=8.33, Ki=4.7nM
    BindingDB: Ki=4.7nM
    16521 4z1n:A (1.47) BS02 4KD 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26276436 MOAD: Ki=5.89nM
    PDBbind: -logKd/Ki=8.23, Ki=5.89nM
    BindingDB: Ki=5.9nM
    16522 4z1q:A (1.399) BS01 558 ? N/A O60885 26985289 MOAD: ic50=0.015uM
    PDBbind: -logKd/Ki=7.82, IC50=0.015uM
    16523 4z1q:B (1.399) BS01 558 ? N/A O60885 26985289 MOAD: ic50=0.015uM
    16524 4z1s:A (1.06) BS01 559 ? N/A O60885 26985289 MOAD: ic50=0.79uM
    PDBbind: -logKd/Ki=6.10, IC50=0.79uM
    16525 4z1s:B (1.06) BS01 559 ? N/A O60885 26985289 MOAD: ic50=0.79uM
    16526 4z2b:A (1.8) BS01 4LC 3.1.13.4
    3.1.4.-
    GO:0003824 ... Q6L8Q7 26055709 MOAD: Ki=17.5nM
    PDBbind: -logKd/Ki=7.76, Ki=17.5nM
    16527 4z2h:A (2.35) BS01 M6A 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=8.3uM
    PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    16528 4z2i:A (2.0) BS01 M6B 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=0.036uM
    PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    16529 4z2i:A (2.0) BS02 M6B 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=0.036uM
    PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    16530 4z3d:A (1.8) BS01 GSH 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71
    GO:0004090 ... P16152 26381805 MOAD: Ka=87200M^-1
    16531 4z3d:B (1.8) BS01 GSH 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71
    GO:0004090 ... P16152 26381805 MOAD: Ka=87200M^-1
    16532 4z3d:C (1.8) BS01 GSH 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71
    GO:0004090 ... P16152 26381805 MOAD: Ka=87200M^-1
    16533 4z3d:D (1.8) BS01 GSH 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71
    GO:0004090 ... P16152 26381805 MOAD: Ka=87200M^-1
    16534 4z3k:A (2.35) BS02 4KL 1.1.1.153 GO:0004033 ... P35270 26565027 MOAD: ic50=0.15uM
    16535 4z3k:B (2.35) BS02 4KL 1.1.1.153 GO:0004033 ... P35270 26565027 MOAD: ic50=0.15uM
    16536 4z3k:C (2.35) BS02 4KL 1.1.1.153 GO:0004033 ... P35270 26565027 MOAD: ic50=0.15uM
    16537 4z3k:D (2.35) BS02 4KL 1.1.1.153 GO:0004033 ... P35270 26565027 MOAD: ic50=0.15uM
    16538 4z3v:A (1.6) BS01 4L6 2.7.10.2 GO:0004672 ... Q06187 26087137 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=28nM, IC50=5.6nM
    16539 4z55:A (1.55) BS01 4LO 2.7.10.1 GO:0004672 ... Q9UM73 26750252 MOAD: ic50=13nM
    16540 4z5x:A (2.1) BS01 GDE 2.4.1.1 GO:0000166 ... P00489 25980608 MOAD: Ki=1730uM
    16541 4z6h:A (1.8) BS01 4L2 ? N/A Q9H8M2 25864491 MOAD: Kd=612nM
    PDBbind: -logKd/Ki=6.21, Kd=612nM
    16542 4z6h:B (1.8) BS01 4L2 ? N/A Q9H8M2 25864491 MOAD: Kd=612nM
    16543 4z87:A (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16544 4z87:A (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16545 4z87:A (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16546 4z87:B (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16547 4z87:B (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16548 4z87:B (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16549 4z87:C (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16550 4z87:C (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16551 4z87:C (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16552 4z87:D (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16553 4z87:D (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16554 4z87:D (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    16555 4z8d:A (2.0) BS01 4LB 2.3.1.180 GO:0004315 ... P0A6R0 27626097 MOAD: ic50=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    16556 4z8d:B (2.0) BS01 4LB 2.3.1.180 GO:0004315 ... P0A6R0 27626097 MOAD: ic50=6uM
    16557 4z93:A (1.27) BS01 4LD ? N/A O60885 26080064 MOAD: Kd=44.6nM
    PDBbind: -logKd/Ki=7.35, Kd=44.6nM
    BindingDB: Kd=47nM, Ki=12nM, IC50=37nM
    16558 4z9l:A (2.1) BS02 880 2.7.11.24 GO:0004672 ... P53779 12954329 MOAD: ic50=1.6nM
    PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=1.6nM
    16559 4zae:A (1.86) BS01 4M1 3.4.21.22 GO:0004252 ... P00740 25978966 MOAD: Ki=3.6nM
    PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    BindingDB: Ki=3.6nM, IC50=3.64nM
    16560 4zaf:A (1.71) BS01 4LR 2.5.1.129 GO:0003824 ... Q9HX08 26083743 MOAD: Kd=12uM
    16561 4zag:A (1.68) BS01 4LR 2.5.1.129 GO:0003824 ... Q9HX08 26083743 MOAD: Kd=12uM
    16562 4zal:A (1.62) BS01 4LR 2.5.1.129 GO:0003824 ... Q9HX08 26083743 MOAD: Kd=12uM
    16563 4zan:A (1.76) BS01 4LR 2.5.1.129 GO:0003824 ... Q9HX08 26083743 MOAD: Kd=12uM
    16564 4zb6:A (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16565 4zb6:A (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16566 4zb6:B (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16567 4zb6:B (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16568 4zb6:C (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    16569 4zb6:C (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    16570 4zb6:D (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    16571 4zb6:D (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    16572 4zb8:A (2.0) BS01 GDS ? N/A A0A0R4I981 26348000 MOAD: Kd=0.94uM
    PDBbind: -logKd/Ki=6.03, Kd=0.94uM
    16573 4zb9:A (2.403) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16574 4zb9:D (2.403) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16575 4zba:A (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16576 4zba:A (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16577 4zba:B (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16578 4zba:B (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16579 4zba:C (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16580 4zba:C (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16581 4zba:D (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16582 4zba:D (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    16583 4zbd:A (1.12) BS01 GSH ? N/A A0A0R4I981 26348000 MOAD: Kd=1.6uM
    16584 4zbd:A (1.12) BS02 GSH ? N/A A0A0R4I981 26348000 MOAD: Kd=1.6uM
    16585 4zbd:B (1.12) BS01 GSH ? N/A A0A0R4I981 26348000 MOAD: Kd=1.6uM
    16586 4zbd:B (1.12) BS02 GSH ? N/A A0A0R4I981 26348000 MOAD: Kd=1.6uM
    16587 4zbf:A (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    16588 4zbf:B (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16589 4zbf:C (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16590 4zbf:D (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16591 4zbf:E (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16592 4zbf:F (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16593 4zbf:G (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16594 4zbf:H (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16595 4zbf:I (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16596 4zbf:J (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16597 4zbf:K (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16598 4zbf:L (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    16599 4zbi:A (2.5) BS01 4M6 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.31uM
    PDBbind: -logKd/Ki=6.51, Ki=0.31uM
    BindingDB: Ki=310nM
    16600 4zbi:B (2.5) BS01 4M6 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.31uM
    BindingDB: Ki=310nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218