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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12401 4d4u:B (1.99) BS01 FUC ? GO:0008150 ... Q4WW81 25760594 MOAD: Kd=91.9uM
    12402 4d4u:B (1.99) BS02 FUC ? GO:0008150 ... Q4WW81 25760594 MOAD: Kd=91.9uM
    12403 4d4u:B (1.99) BS03 FUC ? GO:0008150 ... Q4WW81 25760594 MOAD: Kd=91.9uM
    12404 4d4u:B (1.99) BS04 FUC ? GO:0008150 ... Q4WW81 25760594 MOAD: Kd=91.9uM
    12405 4d4u:B (1.99) BS05 FUC ? GO:0008150 ... Q4WW81 25760594 MOAD: Kd=91.9uM
    12406 4d62:A (2.5) BS01 SIA N/A N/A N/A 26418008 MOAD: Kd=3.64mM
    PDBbind: -logKd/Ki=2.44, Kd=3.64mM
    12407 4d63:A (2.2) BS01 SIA N/A N/A N/A 26418008 MOAD: Kd~7mM
    PDBbind: -logKd/Ki=1.64, Kd~23mM
    12408 4d75:A (2.25) BS01 PK9 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73    		 GO:0002933 ... P08684 26371436 MOAD: Kd=105uM
    BindingDB: Kd=105000nM, IC50=75000nM
    12409 4d7b:A (1.15) BS01 TCW ? GO:0005179 ... P02766 26902880 MOAD: Kd=21nM
    PDBbind: -logKd/Ki=7.68, Kd=21nM
    BindingDB: Kd=56nM
    12410 4d7b:B (1.15) BS01 TCW ? GO:0005179 ... P02766 26902880 MOAD: Kd=21nM
    PDBbind: -logKd/Ki=7.68, Kd=21nM
    BindingDB: Kd=56nM
    12411 4d7m:A (1.55) BS01 TDC ? GO:0000976 ... P0ACT4 25432019 MOAD: Ka=980000000000M^-1
    12412 4d7n:A (1.76) BS01 TDC N/A GO:0003677 ... N/A 25432019 MOAD: Ka=23000000M^-1
    12413 4d7o:A (1.78) BS03 0GD 1.14.13.39 GO:0004517 ... P29476 26091171 MOAD: Ki=525nM
    12414 4d7o:B (1.78) BS04 0GD 1.14.13.39 GO:0004517 ... P29476 26091171 MOAD: Ki=525nM
    12415 4d81:A (2.4) BS01 ADP ? GO:0005524 ... A4YHC5 26632262 MOAD: Kd=0.4uM
    12416 4d83:A (2.4) BS01 0GT 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.055uM
    PDBbind: -logKd/Ki=7.26, IC50=0.055uM
    12417 4d83:B (2.4) BS01 0GT 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.055uM
    12418 4d83:C (2.4) BS01 0GT 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.055uM
    12419 4d86:A (2.0) BS01 ADP 2.4.2.- N/A Q460N5 23473667 MOAD: Kd=6.4uM
    12420 4d86:A (2.0) BS02 ADP 2.4.2.- N/A Q460N5 23473667 MOAD: Kd=6.4uM
    12421 4d88:A (1.7) BS01 BXQ 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=0.049uM
    12422 4d89:A (1.65) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=0.002uM
    12423 4d8c:A (2.07) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    12424 4d8c:B (2.07) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    12425 4d8c:C (2.07) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    12426 4d8n:A (1.68) BS01 0HM 3.4.21.- GO:0001533 ... Q92876 22386244 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    12427 4d8s:A (2.398) BS02 0HX 3.2.1.18 GO:0004308 ... Q07599 23017008 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    12428 4d8z:A (2.198) BS01 0J2 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.51uM
    PDBbind: -logKd/Ki=6.29, Kd=0.51uM
    12429 4d8z:B (2.198) BS01 0J2 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.51uM
    12430 4d9p:A (2.26) BS01 Z17 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: ic50=145uM
    PDBbind: -logKd/Ki=3.84, IC50=145uM
    12431 4d9p:B (2.26) BS01 Z17 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: ic50=145uM
    12432 4da5:A (2.4) BS01 0H7 2.7.1.32
    2.7.1.82    		 GO:0004103 ... P35790 23416529 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    12433 4da5:B (2.4) BS01 0H7 2.7.1.32
    2.7.1.82    		 GO:0004103 ... P35790 23416529 MOAD: Ki=0.36uM
    12434 4daf:A (2.501) BS01 0J4 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.076uM
    PDBbind: -logKd/Ki=7.12, Kd=0.076uM
    12435 4daf:B (2.501) BS01 0J4 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.076uM
    12436 4dai:A (2.5) BS01 0J5 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=110nM
    PDBbind: -logKd/Ki=6.96, Kd=110nM
    12437 4dai:B (2.5) BS01 0J5 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=110nM
    12438 4db7:A (2.5) BS01 Z25 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.273uM
    PDBbind: -logKd/Ki=6.56, Kd=0.273uM
    12439 4db7:B (2.5) BS01 Z25 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.273uM
    12440 4dbm:A (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12441 4dbm:A (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12442 4dbm:B (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12443 4dbm:B (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12444 4dbm:C (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12445 4dbm:C (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12446 4dbm:D (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12447 4dbm:D (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    12448 4dbm:E (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12449 4dbm:E (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12450 4dbs:A (1.852) BS02 0HV 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22507964 MOAD: ic50=0.08uM
    BindingDB: IC50=80nM
    12451 4dbs:A (1.852) BS03 0HV 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22507964 MOAD: ic50=0.08uM
    BindingDB: IC50=80nM
    12452 4dbs:B (1.852) BS02 0HV 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22507964 MOAD: ic50=0.08uM
    BindingDB: IC50=80nM
    12453 4dbs:B (1.852) BS03 0HV 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22507964 MOAD: ic50=0.08uM
    BindingDB: IC50=80nM
    12454 4dbw:A (1.802) BS02 511 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 23432095 MOAD: ic50=0.1uM
    BindingDB: IC50=0.96nM
    12455 4dbw:A (1.802) BS03 511 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 23432095 MOAD: ic50=0.1uM
    BindingDB: IC50=0.96nM
    12456 4dbw:B (1.802) BS02 511 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 23432095 MOAD: ic50=0.1uM
    BindingDB: IC50=0.96nM
    12457 4dbw:B (1.802) BS03 511 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 23432095 MOAD: ic50=0.1uM
    BindingDB: IC50=0.96nM
    12458 4dce:A (2.03) BS01 0JF 2.7.10.1 GO:0004672 ... Q9UM73 22263917 MOAD: ic50=0.174uM
    PDBbind: -logKd/Ki=6.76, IC50=0.174uM
    BindingDB: IC50=384nM
    12459 4dce:B (2.03) BS01 0JF 2.7.10.1 GO:0004672 ... Q9UM73 22263917 MOAD: ic50=0.174uM
    BindingDB: IC50=384nM
    12460 4dcs:A (2.25) BS01 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8.0uM
    12461 4dct:A (2.3) BS01 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    12462 4dct:A (2.3) BS02 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    12463 4dcu:A (2.0) BS01 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    12464 4dcu:A (2.0) BS02 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    12465 4ddh:A (2.07) BS01 MS0 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.48mM
    PDBbind: -logKd/Ki=3.30, Kd=0.5mM
    12466 4ddh:B (2.07) BS01 MS0 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.48mM
    12467 4ddk:A (1.75) BS01 0HN 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=5.13mM
    PDBbind: -logKd/Ki=2.29, Kd=5.1mM
    12468 4ddk:B (1.75) BS01 0HN 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=5.13mM
    12469 4ddk:B (1.75) BS02 0HN 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=5.13mM
    12470 4ddl:A (2.07) BS02 0JQ 3.1.4.17 GO:0004114 ... Q9Y233 22365755 MOAD: ic50=4.9nM
    PDBbind: -logKd/Ki=8.31, IC50=4.9nM
    BindingDB: IC50=4.9nM
    12471 4ddl:B (2.07) BS02 0JQ 3.1.4.17 GO:0004114 ... Q9Y233 22365755 MOAD: ic50=4.9nM
    BindingDB: IC50=4.9nM
    12472 4ddm:A (1.83) BS01 0HO 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=3.48mM
    PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    12473 4ddm:B (1.83) BS01 0HO 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=3.48mM
    12474 4ddn:A (1.9) BS01 AMG ? GO:0002213 ... P93193 22808208 MOAD: Kd=244uM
    12475 4ddn:B (1.9) BS01 AMG ? GO:0002213 ... P93193 22808208 MOAD: Kd=244uM
    12476 4ddn:C (1.9) BS01 AMG ? GO:0002213 ... P93193 22808208 MOAD: Kd=244uM
    12477 4ddn:D (1.9) BS01 AMG ? GO:0002213 ... P93193 22808208 MOAD: Kd=244uM
    12478 4ddr:A (2.05) BS02 MMV 1.5.1.3 GO:0000900 ... P00374 23035243 MOAD: Ki=2841nM
    12479 4dds:A (1.36) BS01 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12480 4dds:A (1.36) BS02 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12481 4dds:A (1.36) BS03 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12482 4dds:B (1.36) BS01 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    12483 4dds:B (1.36) BS02 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    12484 4ddy:A (1.36) BS01 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12485 4ddy:A (1.36) BS02 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12486 4ddy:A (1.36) BS03 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12487 4ddy:B (1.36) BS01 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12488 4ddy:B (1.36) BS02 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12489 4ddy:B (1.36) BS03 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12490 4ddy:B (1.36) BS04 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12491 4ddy:B (1.36) BS05 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12492 4ddy:B (1.36) BS06 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12493 4ddy:B (1.36) BS07 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    12494 4de0:A (1.12) BS01 0JB 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    12495 4de0:B (1.12) BS01 0JB 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.3uM
    12496 4de1:A (1.26) BS01 0J6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    12497 4de1:B (1.26) BS01 0J6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.1uM
    12498 4de1:B (1.26) BS02 0J6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.1uM
    12499 4de2:A (1.4) BS01 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76.0uM
    12500 4de2:A (1.4) BS02 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76.0uM
    12501 4de2:B (1.4) BS01 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    12502 4de2:B (1.4) BS02 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    12503 4de3:A (1.44) BS01 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12504 4de3:A (1.44) BS02 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12505 4de3:A (1.44) BS03 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12506 4de3:A (1.44) BS04 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12507 4de3:A (1.44) BS05 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12508 4de3:A (1.44) BS06 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12509 4de3:B (1.44) BS01 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    12510 4de3:B (1.44) BS02 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    12511 4de3:B (1.44) BS03 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    12512 4de3:B (1.44) BS04 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    12513 4de3:B (1.44) BS05 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    12514 4de5:A (2.25) BS01 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=670uM
    PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    12515 4de5:B (2.25) BS01 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=670uM
    12516 4dea:A (2.45) BS01 NHI 2.7.11.1 GO:0000212 ... O14965 22803810 MOAD: ic50=256nM
    PDBbind: -logKd/Ki=6.59, IC50=256nM
    BindingDB: IC50=256nM
    12517 4deg:A (2.0) BS01 0JJ 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=3nM, Ki=3.2nM
    12518 4deh:A (2.0) BS01 0JK 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=612nM
    PDBbind: -logKd/Ki=6.21, IC50=612nM
    BindingDB: IC50=612nM
    12519 4dei:A (2.05) BS01 0JL 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=2nM
    12520 4del:A (1.58) BS03 PGH 4.1.2.13 GO:0004332 ... P9WQA3 23298222 MOAD: Kd=21.1nM
    PDBbind: -logKd/Ki=7.68, Kd=21.1nM
    12521 4dem:F (1.85) BS01 YS4 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 22390415 MOAD: ic50=28nM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    12522 4der:A (1.9) BS01 AGI ? GO:0005179 ... P02766 22842046 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    BindingDB: IC50=653nM, Kd=250nM
    12523 4der:B (1.9) BS01 AGI ? GO:0005179 ... P02766 22842046 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    BindingDB: IC50=653nM, Kd=250nM
    12524 4des:A (1.75) BS01 57D ? GO:0005179 ... P02766 22842046 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.40uM
    12525 4des:B (1.75) BS01 57D ? GO:0005179 ... P02766 22842046 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.40uM
    12526 4det:B (2.05) BS01 KMP ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.10uM
    12527 4deu:A (1.599) BS01 NAR ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.29uM
    PDBbind: -logKd/Ki=5.64, Kd=2.29uM
    12528 4deu:B (1.599) BS01 NAR ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.29uM
    PDBbind: -logKd/Ki=5.64, Kd=2.29uM
    12529 4dew:A (1.899) BS01 LU2 ? N/A P02766 22842046 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.10uM
    BindingDB: IC50=7000nM, Kd=70nM
    12530 4dew:B (1.899) BS01 LU2 ? N/A P02766 22842046 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.10uM
    BindingDB: IC50=7000nM, Kd=70nM
    12531 4dff:B (2.11) BS01 0JP 3.1.4.17 GO:0004114 ... Q9Y233 22377514 MOAD: Ki=35nM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    BindingDB: Ki=35nM
    12532 4dfg:B (1.23) BS01 0JV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22364812 MOAD: Ki=1.8pM
    PDBbind: -logKd/Ki=11.74, Ki=1.8pM
    12533 4dfl:A (1.98) BS01 0K0 2.7.10.2 GO:0004672 ... P43405 22425453 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    12534 4dfn:A (2.48) BS01 0K1 2.7.10.2 GO:0004672 ... P43405 22425453 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    12535 4dfu:A (1.98) BS02 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    PDBbind: -logKd/Ki=4.60, Ki=25.1uM
    12536 4dfu:A (1.98) BS03 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    PDBbind: -logKd/Ki=4.60, Ki=25.1uM
    12537 4dfu:B (1.98) BS01 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    12538 4dfu:B (1.98) BS03 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    12539 4dgm:A (1.65) BS01 AGI 2.7.11.1 GO:0004672 ... P28523 22794353 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    12540 4dgn:A (1.75) BS01 LU2 2.7.11.1 GO:0004672 ... P28523 22794353 MOAD: ic50=0.35uM
    PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    12541 4dgr:A (1.551) BS04 3LV 3.2.1.18 GO:0004308 ... P03472 22559154 MOAD: ic50=9.1uM
    PDBbind: -logKd/Ki=5.04, IC50=9.1uM
    12542 4dh6:A (2.5) BS01 0KN 3.4.23.46 GO:0004190 ... P56817 22468639 MOAD: ic50=16.8nM
    PDBbind: -logKd/Ki=7.77, IC50=16.8nM
    BindingDB: IC50=26nM
    12543 4dhl:A (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    12544 4dhl:B (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    12545 4dhl:C (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    12546 4dhl:D (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    12547 4di2:A (2.0) BS01 0K9 3.4.23.46 GO:0004190 ... P56817 22468684 MOAD: ic50=5.5nM
    PDBbind: -logKd/Ki=8.26, IC50=5.5nM
    12548 4di2:B (2.0) BS01 0K9 3.4.23.46 GO:0004190 ... P56817 22468684 MOAD: ic50=5.5nM
    12549 4di2:C (2.0) BS01 0K9 3.4.23.46 GO:0004190 ... P56817 22468684 MOAD: ic50=5.5nM
    12550 4did:A (2.3501) BS01 GDP 3.6.5.2 GO:0000139 ... P60953 22362774 MOAD: Kd=6uM
    12551 4dij:A (1.9) BS01 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12552 4dij:A (1.9) BS02 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12553 4dij:B (1.9) BS01 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    12554 4dij:B (1.9) BS02 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    12555 4djo:A (1.78) BS01 MK5 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.003nM
    PDBbind: -logKd/Ki=11.52, Ki=3pM
    12556 4djp:A (1.4) BS01 M73 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.028nM
    PDBbind: -logKd/Ki=10.55, Ki=0.028nM
    12557 4djq:A (1.4) BS01 M86 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.048nM
    PDBbind: -logKd/Ki=10.32, Ki=0.048nM
    12558 4djr:A (1.55) BS01 0KJ 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.003nM
    PDBbind: -logKd/Ki=11.52, Ki=0.003nM
    12559 4dju:A (1.8) BS01 0KK 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=3.6uM
    PDBbind: -logKd/Ki=5.44, Ki=3.6uM
    12560 4dju:B (1.8) BS01 0KK 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=3.6uM
    12561 4djv:A (1.73) BS01 0KM 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: IC50=392nM
    12562 4djv:B (1.73) BS01 0KM 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.19uM
    BindingDB: IC50=392nM
    12563 4djw:A (1.9) BS01 0KP 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.53uM
    PDBbind: -logKd/Ki=6.28, Ki=0.53uM
    BindingDB: IC50=1680nM
    12564 4djw:B (1.9) BS01 0KP 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.53uM
    BindingDB: IC50=1680nM
    12565 4djx:A (1.5) BS01 0KQ 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=59nM
    PDBbind: -logKd/Ki=7.23, Ki=59nM
    12566 4djx:B (1.5) BS01 0KQ 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=59nM
    12567 4djy:A (1.86) BS01 0KR 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=5.4nM
    PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    12568 4djy:B (1.86) BS01 0KR 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=5.4nM
    12569 4dk7:A (2.45) BS02 0KS ? GO:0003677 ... P55055 22406115 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12570 4dk7:C (2.45) BS02 0KS ? GO:0003677 ... P55055 22406115 MOAD: ic50=0.02uM
    12571 4dko:A (1.981) BS01 0LM ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    12572 4dko:C (1.981) BS01 0LM ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    12573 4dkp:A (1.7978) BS01 0LL ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12574 4dkp:C (1.7978) BS01 0LL ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=1.9uM
    12575 4dkq:A (1.888) BS01 0LK ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.25uM
    PDBbind: -logKd/Ki=6.60, Kd=0.25uM
    12576 4dkr:A (1.8) BS01 0LJ ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.30uM
    12577 4dkr:C (1.8) BS01 0LJ ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    12578 4dld:A (2.0) BS01 TZG ? GO:0015276 ... P22756 22407805 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: Ki=3000nM
    12579 4dld:B (2.0) BS01 TZG ? GO:0015276 ... P22756 22407805 MOAD: Ki=1.5uM
    BindingDB: Ki=3000nM
    12580 4dli:A (1.91) BS01 IRG 2.7.11.24 GO:0000077 ... Q16539 22768308 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=5.62, Kd=2.40uM
    12581 4dli:A (1.91) BS02 IRG 2.7.11.24 GO:0000077 ... Q16539 22768308 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=5.62, Kd=2.40uM
    12582 4dmn:A (2.45) BS01 0L9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 22437836 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    BindingDB: IC50=4e+2nM
    12583 4dn0:A (2.3) BS01 C2E ? N/A A0A0H2ZD98 22605337 Manual survey: Kd=1.9uM (22605337)
    MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12584 4dn0:A (2.3) BS02 C2E ? N/A A0A0H2ZD98 22605337 Manual survey: Kd=1.9uM (22605337)
    MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12585 4do1:A (2.0) BS02 ANN ? GO:0004497 ... Q2IU02 22695988 MOAD: Kd=0.28uM
    12586 4do1:B (2.0) BS02 ANN ? GO:0004497 ... Q2IU02 22695988 MOAD: Kd=0.28uM
    12587 4do1:C (2.0) BS02 ANN ? GO:0004497 ... Q2IU02 22695988 MOAD: Kd=0.28uM
    12588 4do1:D (2.0) BS02 ANN ? GO:0004497 ... Q2IU02 22695988 MOAD: Kd=0.28uM
    12589 4do3:A (2.25) BS02 0LA 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 23240907 MOAD: ic50=74uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    BindingDB: IC50=32000nM
    12590 4do3:B (2.25) BS02 0LA 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 23240907 MOAD: ic50=74uM
    BindingDB: IC50=32000nM
    12591 4dp3:A (2.4) BS01 MMV 1.5.1.3
    2.1.1.45    		 GO:0000166 ... D9N170 23035243 MOAD: Ki=0.54nM
    12592 4dp3:B (2.4) BS01 MMV 1.5.1.3
    2.1.1.45    		 GO:0000166 ... D9N170 23035243 MOAD: Ki=0.54nM
    12593 4dpf:A (1.8) BS01 0LG 3.4.23.46 GO:0004190 ... P56817 22698785 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    12594 4dph:A (2.38) BS01 P65 1.5.1.3
    2.1.1.45    		 GO:0000166 ... D9N170 23035243 MOAD: Ki=5.59nM
    12595 4dph:B (2.38) BS01 P65 1.5.1.3
    2.1.1.45    		 GO:0000166 ... D9N170 23035243 MOAD: Ki=5.59nM
    12596 4dpi:A (1.9) BS01 0N1 3.4.23.46 GO:0004190 ... P56817 22698785 MOAD: ic50=78nM
    PDBbind: -logKd/Ki=7.11, IC50=78nM
    12597 4dq2:A (2.5) BS01 BTX N/A GO:0004077 ... N/A 22437830 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    12598 4dr9:A (1.9) BS02 BB2 3.5.1.88 GO:0006412 ... A0A0H3JZJ4 23407310 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    12599 4dr9:B (1.9) BS02 BB2 3.5.1.88 GO:0006412 ... A0A0H3JZJ4 23407310 MOAD: ic50=10nM
    12600 4dr9:C (1.9) BS02 BB2 3.5.1.88 GO:0006412 ... A0A0H3JZJ4 23407310 MOAD: ic50=10nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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