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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9801 3pxf:A (1.8) BS02 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9802 3pxq:A (1.9) BS01 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9803 3pxq:A (1.9) BS02 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9804 3pxq:A (1.9) BS03 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9805 3pxy:A (1.8) BS01 JWS 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: ic50=5.9uM
    PDBbind: -logKd/Ki=5.23, IC50=5.9uM
    9806 3pxz:A (1.7) BS01 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9807 3pxz:A (1.7) BS02 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9808 3pxz:A (1.7) BS03 JWS 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: ic50=5.9uM
    PDBbind: -logKd/Ki=5.23, IC50=5.9uM
    9809 3py0:A (1.75) BS01 SU9 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=22nM
    9810 3py1:A (2.05) BS01 SU9 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=22nM
    9811 3py1:A (2.05) BS02 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9812 3py1:A (2.05) BS03 2AN 2.7.11.22 GO:0000082 ... P24941 21291269 MOAD: Kd=37uM
    BindingDB: Kd=37000nM, IC50=91000nM
    9813 3pyx:B (1.6) BS02 12T N/A GO:0004073 ... N/A 22039970 MOAD: Ki=0.78mM
    9814 3pz1:B (1.95) BS01 3PZ 2.5.1.60 GO:0003824 ... Q08603 21520375 MOAD: ic50=724nM
    PDBbind: -logKd/Ki=6.14, IC50=724nM
    9815 3pz2:B (2.35) BS03 3PZ 2.5.1.60 GO:0003824 ... Q08603 21520375 MOAD: ic50=724nM
    PDBbind: -logKd/Ki=6.14, IC50=724nM
    9816 3pz3:B (2.0) BS03 PZ3 2.5.1.60 GO:0003824 ... Q08603 21520375 MOAD: ic50=141nM
    PDBbind: -logKd/Ki=6.85, IC50=141nM
    9817 3pz4:B (2.1) BS03 3PZ 2.5.1.58 GO:0003824 ... Q02293 21520375 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    9818 3q2g:A (2.3) BS01 QGF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    9819 3q2g:B (2.3) BS01 QGF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=3.5nM
    9820 3q2h:A (2.33) BS03 QHF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=0.69nM
    PDBbind: -logKd/Ki=9.16, IC50=690pM
    9821 3q2h:B (2.33) BS03 QHF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=0.69nM
    9822 3q32:A (2.5) BS01 J2I 2.7.10.2 GO:0004672 ... O60674 21282055 MOAD: ic50=0.0018uM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=1.8nM
    9823 3q32:B (2.5) BS01 J2I 2.7.10.2 GO:0004672 ... O60674 21282055 MOAD: ic50=0.0018uM
    BindingDB: IC50=1.8nM
    9824 3q3k:A (2.0) BS03 D90 3.4.21.6 GO:0004252 ... P00742 21345673 MOAD: ic50=7.4nM
    PDBbind: -logKd/Ki=8.13, IC50=7.4nM
    BindingDB: IC50=7.4nM
    9825 3q43:A (1.8) BS02 D66 3.4.11.- GO:0006508 ... O96935 21366301 MOAD: Ki=43nM
    PDBbind: -logKd/Ki=7.37, Ki=43nM
    BindingDB: Ki=43nM
    9826 3q44:A (1.8) BS02 D50 3.4.11.- GO:0006508 ... O96935 21366301 MOAD: Ki=490nM
    PDBbind: -logKd/Ki=6.31, Ki=490nM
    BindingDB: Ki=490nM
    9827 3q6w:A (1.75) BS01 Q6W 2.7.10.1 GO:0004672 ... P08581 21247903 MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    BindingDB: IC50=85nM
    9828 3q77:A (1.998) BS02 2HY 3.4.21.37 GO:0000122 ... P08246 21549129 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    9829 3q7d:A (2.4) BS02 NPX 1.14.99.1 GO:0001516 ... Q05769 22053353 MOAD: ic50=430nM
    9830 3q7d:B (2.4) BS02 NPX 1.14.99.1 GO:0001516 ... Q05769 22053353 MOAD: ic50=430nM
    9831 3q9n:A (2.0) BS01 COA N/A N/A N/A 21458342 MOAD: Kd=130nM
    9832 3q9n:B (2.0) BS01 COA N/A N/A N/A 21458342 MOAD: Kd=130nM
    9833 3q9o:A (1.793) BS01 NAD 2.4.2.36 GO:0016757 ... Q5EK40 22535961 MOAD: Kd=513uM
    9834 3q9u:A (2.3) BS01 COA N/A N/A N/A 21458342 MOAD: Kd=130nM
    9835 3q9u:B (2.3) BS01 COA N/A N/A N/A 21458342 MOAD: Kd=130nM
    9836 3qbc:A (1.65) BS01 B55 2.7.6.3 GO:0003848 ... A0A0H3JXR3 22276115 MOAD: Kd=10.8uM
    PDBbind: -logKd/Ki=4.97, Kd=10.8uM
    9837 3qbc:A (1.65) BS02 B55 2.7.6.3 GO:0003848 ... A0A0H3JXR3 22276115 MOAD: Kd=10.8uM
    PDBbind: -logKd/Ki=4.97, Kd=10.8uM
    9838 3qbc:B (1.65) BS01 B55 2.7.6.3 GO:0003848 ... A0A0H3JXR3 22276115 MOAD: Kd=10.8uM
    9839 3qbc:B (1.65) BS02 B55 2.7.6.3 GO:0003848 ... A0A0H3JXR3 22276115 MOAD: Kd=10.8uM
    9840 3qbh:A (2.24) BS01 QBH 3.4.23.46 GO:0004190 ... P56817 21388807 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    BindingDB: IC50=150nM
    9841 3qbh:B (2.24) BS01 QBH 3.4.23.46 GO:0004190 ... P56817 21388807 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    9842 3qbh:C (2.24) BS01 QBH 3.4.23.46 GO:0004190 ... P56817 21388807 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    9843 3qc4:A (1.8) BS01 MP7 2.7.11.1 GO:0004672 ... O15530 21459573 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: EC50=1nM
    9844 3qc4:B (1.8) BS01 MP7 2.7.11.1 GO:0004672 ... O15530 21459573 MOAD: ic50=0.002uM
    BindingDB: EC50=1nM
    9845 3qce:A (2.1) BS01 NXY 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: Ki=2.5uM
    BindingDB: Ki=2500nM, IC50=2500nM
    9846 3qce:B (2.1) BS01 NXY 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: Ki=2.5uM
    PDBbind: -logKd/Ki=5.60, Ki=2.5uM
    BindingDB: Ki=2500nM, IC50=2500nM
    9847 3qcf:A (2.5) BS01 NXY 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: Ki=2.5uM
    BindingDB: Ki=2500nM, IC50=2500nM
    9848 3qcf:B (2.5) BS01 NXY 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: Ki=2.5uM
    PDBbind: -logKd/Ki=5.60, Ki=2.5uM
    BindingDB: Ki=2500nM, IC50=2500nM
    9849 3qch:A (2.4) BS01 NX2 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    9850 3qci:A (2.27) BS01 NX3 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: ic50=3.8uM
    PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    BindingDB: IC50=3800nM
    9851 3qcj:A (2.26) BS01 NX4 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    9852 3qck:A (2.05) BS01 NX5 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    9853 3qcl:A (2.4) BS01 NXV 3.1.3.48 GO:0004725 ... P23470 21882820 MOAD: ic50=4uM
    PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: IC50=4000nM
    9854 3qcq:A (2.501) BS01 3Q0 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=0.158uM
    PDBbind: -logKd/Ki=6.80, IC50=0.158uM
    BindingDB: IC50=158nM
    9855 3qcs:A (2.487) BS01 3Q1 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=0.316uM
    PDBbind: -logKd/Ki=6.50, IC50=0.316uM
    BindingDB: IC50=316nM
    9856 3qcx:A (2.3) BS01 3Q2 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=63nM
    PDBbind: -logKd/Ki=7.20, IC50=63nM
    BindingDB: IC50=63nM
    9857 3qcy:A (2.2) BS01 3Q3 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    9858 3qd0:A (1.99) BS01 3Q4 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=3.16nM
    PDBbind: -logKd/Ki=8.50, IC50=3.16nM
    BindingDB: IC50=333nM
    9859 3qd3:A (2.0) BS01 3Q5 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=0.00000001M
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=10.0nM
    9860 3qd4:A (2.3) BS01 3Q6 2.7.11.1 GO:0004672 ... O15530 21341675 MOAD: ic50=6.31nM
    PDBbind: -logKd/Ki=8.20, IC50=6.31nM
    BindingDB: IC50=74nM
    9861 3qdd:A (1.79) BS01 94M 3.6.4.10 GO:0005524 ... P07900 22938030 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM, EC50=38nM, IC50=5.1nM
    9862 3qfx:A (2.2) BS02 CP6 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27783 21650210 MOAD: Ki=24.2nM
    9863 3qfx:B (2.2) BS02 CP6 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27783 21650210 MOAD: Ki=24.2nM
    9864 3qgw:B (2.1) BS01 L7A 2.7.10.2 GO:0004672 ... Q08881 21391610 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    BindingDB: Ki=1300nM
    9865 3qgy:B (2.1) BS01 L7O 2.7.10.2 GO:0004672 ... Q08881 21391610 MOAD: Ki=0.016uM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    BindingDB: Ki=16nM
    9866 3qin:A (1.6967) BS03 P1Y 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.1.26.4
    3.4.23.16    		 GO:0003676 ... P04585
    P0A7Y4    		 21464257 MOAD: Kd=136nM
    PDBbind: -logKd/Ki=6.87, Kd=136nM
    9867 3qio:A (1.4011) BS03 QID 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.1.26.4
    3.4.23.16    		 GO:0003676 ... P04585
    P0A7Y4    		 21464257 MOAD: Kd=144nM
    PDBbind: -logKd/Ki=6.84, Kd=144nM
    9868 3qiy:A (2.3) BS02 QI1 N/A GO:0004222 ... N/A 21434688 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    9869 3qiz:A (2.0) BS02 QI2 N/A GO:0004222 ... N/A 21434688 MOAD: Ki=6.1uM
    PDBbind: -logKd/Ki=5.21, Ki=6.1uM
    9870 3qj0:A (2.301) BS02 QI3 N/A GO:0004222 ... N/A 21434688 MOAD: Ki=6.3uM
    PDBbind: -logKd/Ki=5.20, Ki=6.3uM
    9871 3qj9:A (2.3) BS01 QJ9 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 21502526 MOAD: ic50=951nM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    BindingDB: IC50=60nM
    9872 3qj9:B (2.3) BS01 QJ9 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 21502526 MOAD: ic50=951nM
    BindingDB: IC50=60nM
    9873 3qk5:A (2.2) BS01 QK5 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 21392988 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    9874 3qk5:B (2.2) BS01 QK5 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 21392988 MOAD: ic50=0.018uM
    BindingDB: IC50=18nM
    9875 3qkd:A (2.02) BS01 HI0 ? GO:0042981 ... Q07817 21366295 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.38, Kd=4.2nM
    BindingDB: IC50=7nM, Kd=4.2nM
    9876 3qkd:B (2.02) BS01 HI0 ? GO:0042981 ... Q07817 21366295 MOAD: ic50=3nM
    BindingDB: IC50=7nM, Kd=4.2nM
    9877 3qkm:A (2.2) BS01 SM9 2.7.11.1 GO:0004672 ... P31749 21420856 MOAD: ic50=0.038uM
    PDBbind: -logKd/Ki=7.42, IC50=38nM
    9878 3qlr:A (2.149) BS02 QLR 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=45nM
    BindingDB: IC50=45nM
    9879 3qlr:B (2.149) BS02 QLR 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=45nM
    BindingDB: IC50=45nM
    9880 3qls:A (1.733) BS02 55V 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=33nM
    BindingDB: IC50=33nM
    9881 3qls:B (1.733) BS02 55V 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=33nM
    BindingDB: IC50=33nM
    9882 3qlw:A (2.504) BS02 N22 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=100nM
    BindingDB: IC50=100nM
    9883 3qlw:B (2.504) BS02 N22 1.5.1.3 GO:0004146 ... P22906 21726415 MOAD: ic50=100nM
    BindingDB: IC50=100nM
    9884 3qlx:A (2.239) BS02 QLR 1.5.1.3 GO:0000166 ... Q6FPH0 21726415 MOAD: ic50=27nM
    BindingDB: IC50=27nM
    9885 3qlx:B (2.239) BS02 QLR 1.5.1.3 GO:0000166 ... Q6FPH0 21726415 MOAD: ic50=27nM
    BindingDB: IC50=27nM
    9886 3qlz:A (1.94) BS02 QLZ 1.5.1.3 GO:0000166 ... Q6FPH0 21726415 MOAD: ic50=15nM
    9887 3qlz:B (1.94) BS02 QLZ 1.5.1.3 GO:0000166 ... Q6FPH0 21726415 MOAD: ic50=15nM
    9888 3qoa:A (2.1) BS02 3QO 1.14.13.- GO:0004497 ... P20813 21875942 MOAD: Kd=0.21uM
    9889 3qox:A (2.3) BS01 SAH 2.1.1.360 GO:0031151 ... Q8TEK3 21564555 MOAD: Ki=0.27uM
    PDBbind: -logKd/Ki=6.57, Ki=0.27uM
    BindingDB: Ki=160nM, IC50=600nM, Kd=150nM
    9890 3qpn:A (2.0) BS02 PFK 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    9891 3qpo:A (1.8) BS02 PFR 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=247nM
    PDBbind: -logKd/Ki=6.61, IC50=247nM
    BindingDB: IC50=247nM
    9892 3qpp:A (1.8) BS02 PFW 3.1.4.17 GO:0004114 ... Q9QYJ6 21650160 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    9893 3qqa:A (2.2) BS01 TCH ? GO:0003677 ... Q7B8P6 21328631 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    9894 3qri:A (2.1) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    9895 3qri:B (2.1) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=0.8nM
    9896 3qrj:A (1.82) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    9897 3qrj:B (1.82) BS01 919 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=4nM
    9898 3qrk:A (2.3) BS01 9DP 2.7.10.2 GO:0004672 ... P00519 21481795 MOAD: ic50=57nM
    PDBbind: -logKd/Ki=7.24, IC50=57nM
    9899 3qsb:A (1.9) BS01 743 2.7.7.7 GO:0003677 ... P0A988 21604761 MOAD: ic50=8.3uM
    PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    9900 3qsb:B (1.9) BS01 743 2.7.7.7 GO:0003677 ... P0A988 21604761 MOAD: ic50=8.3uM
    9901 3qse:A (1.75) BS03 SAR 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd>10mM
    9902 3qse:B (1.75) BS03 SAR 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd>10mM
    9903 3qss:A (1.85) BS04 MTG 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd=4.9mM
    9904 3qss:B (1.85) BS04 MTG 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd=4.9mM
    9905 3qt6:A (2.047) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=4.3uM
    PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    9906 3qt6:B (2.047) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=4.3uM
    9907 3qt7:A (2.199) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=49uM
    PDBbind: -logKd/Ki=7.31, Kd=49nM
    9908 3qt7:B (2.199) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=49uM
    9909 3qtf:A (1.5703) BS01 05S 3.6.4.10 GO:0005524 ... P07900 21420297 MOAD: ic50=0.11uM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=110nM
    9910 3qti:A (2.0) BS01 3QT 2.7.10.1 GO:0004672 ... P08581 21697284 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=14nM
    9911 3qti:B (2.0) BS01 3QT 2.7.10.1 GO:0004672 ... P08581 21697284 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    9912 3qto:H (1.52) BS03 10P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=74.8uM
    PDBbind: -logKd/Ki=4.13, Ki=74.8uM
    9913 3qtv:H (1.63) BS03 06P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=22.5uM
    PDBbind: -logKd/Ki=4.65, Ki=22.5uM
    9914 3qug:A (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    9915 3qug:B (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    9916 3qup:A (1.9) BS01 LUN 2.7.10.1 GO:0004672 ... P55144 22119469 MOAD: ic50=0.476uM
    PDBbind: -logKd/Ki=6.32, IC50=0.476uM
    9917 3quy:A (2.25) BS02 QUY ? N/A P11609 21552205 MOAD: Kd=187nM
    9918 3quz:A (2.3) BS02 QUV ? N/A P11609 21552205 MOAD: Kd=39.6nM
    9919 3qvu:A (2.5) BS01 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    PDBbind: -logKd/Ki=3.55, Ki=283uM
    9920 3qvu:B (2.5) BS02 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    9921 3qvv:A (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    PDBbind: -logKd/Ki=4.42, Ki=38uM
    9922 3qvv:B (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    9923 3qwc:H (1.75) BS03 98P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=55.4uM
    PDBbind: -logKd/Ki=4.26, Ki=55.4uM
    9924 3qwi:A (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    9925 3qwi:B (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    9926 3qwi:D (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    9927 3qx5:H (1.35) BS03 02P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=63.5uM
    PDBbind: -logKd/Ki=4.20, Ki=63.5uM
    9928 3qx8:A (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    PDBbind: -logKd/Ki=2.86, Kd=1.37mM
    9929 3qx8:B (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    9930 3qx8:C (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    9931 3qx9:A (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    PDBbind: -logKd/Ki=4.05, Kd=0.09mM
    9932 3qx9:B (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    9933 3qx9:C (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    9934 3qxc:A (1.34) BS01 ATP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    9935 3qxh:A (1.36) BS02 ADP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    9936 3qxm:A (1.65) BS01 NDZ ? GO:0015276 ... Q13002 21893069 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    9937 3qxm:B (1.65) BS01 NDZ ? GO:0015276 ... Q13002 21893069 MOAD: Ki=33nM
    9938 3qxt:A (1.7) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=6700nM
    PDBbind: -logKd/Ki=5.22, Kd=6uM
    9939 3qxt:B (1.7) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=6700nM
    9940 3qxv:A (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    PDBbind: -logKd/Ki=8.40, Kd=4nM
    9941 3qxv:B (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    9942 3qxv:C (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    9943 3qxv:D (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    9944 3qxv:E (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    9945 3qyl:A (1.79) BS01 7ME 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=1uM
    9946 3qyo:A (2.09) BS01 Q24 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=7uM
    9947 3qyy:A (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    9948 3qyy:A (1.9) BS03 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    9949 3qyy:B (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    9950 3qyy:B (1.9) BS02 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    9951 3r00:A (2.1) BS01 UNJ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=8.5uM
    PDBbind: -logKd/Ki=5.07, IC50=8.5uM
    BindingDB: IC50=9000nM
    9952 3r02:A (1.95) BS01 UNM 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    9953 3r04:A (1.7) BS01 UNQ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    9954 3r0i:A (2.1) BS02 C0K 1.1.1.267 GO:0008299 ... P45568 21866890 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    9955 3r0i:B (2.1) BS02 C0K 1.1.1.267 GO:0008299 ... P45568 21866890 MOAD: ic50=0.12uM
    9956 3r0t:A (1.75) BS01 FU9 2.7.11.1 GO:0004672 ... P68400 21870818 MOAD: ic50=0.91nM
    PDBbind: -logKd/Ki=9.04, IC50=0.91nM
    BindingDB: IC50=>750nM
    9957 3r0w:A (1.7) BS01 RSY 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=30.3uM
    PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    9958 3r0y:A (1.65) BS01 RSZ 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=14.53uM
    PDBbind: -logKd/Ki=4.84, Kd=14.53uM
    9959 3r16:A (1.6) BS02 5UN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    BindingDB: Ki=50nM
    9960 3r17:B (1.7) BS02 5UM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=390nM
    PDBbind: -logKd/Ki=6.41, Ki=390nM
    BindingDB: Ki=390nM
    9961 3r1v:A (2.19) BS01 AZB ? GO:0005549 ... Q7PXT9 22019737 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    9962 3r1v:B (2.19) BS01 AZB ? GO:0005549 ... Q7PXT9 22019737 MOAD: Kd=0.12uM
    9963 3r32:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=6nM
    9964 3r32:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=6nM
    9965 3r33:A (2.09) BS01 6ME 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=0.8uM
    BindingDB: Ki=1100nM
    9966 3r34:A (1.8) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    9967 3r34:A (1.8) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    9968 3r34:B (1.8) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    9969 3r34:B (1.8) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    9970 3r35:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    9971 3r35:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    9972 3r35:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    9973 3r35:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    9974 3r37:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    9975 3r37:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    9976 3r37:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    9977 3r37:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    9978 3r3b:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9979 3r3b:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9980 3r3b:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9981 3r3b:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9982 3r3c:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    9983 3r3c:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    9984 3r3c:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    9985 3r3c:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    9986 3r3d:A (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    9987 3r3d:A (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    9988 3r3d:B (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    9989 3r3d:B (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    9990 3r3f:A (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9991 3r3f:A (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9992 3r3f:B (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9993 3r3f:B (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    9994 3r4m:A (1.7) BS01 WOE 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=1200nM
    9995 3r4n:A (2.0) BS01 FU5 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.13uM
    PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    BindingDB: Ki=130nM
    9996 3r4n:B (2.0) BS01 FU5 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.13uM
    BindingDB: Ki=130nM
    9997 3r4p:A (1.7) BS01 FU7 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    9998 3r4p:B (1.7) BS01 FU7 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.011uM
    BindingDB: Ki=11nM
    9999 3r51:A (2.1) BS01 MMA ? GO:0002213 ... P93193 22808208 MOAD: Kd=142uM
    10000 3r52:A (2.1) BS01 GYP ? GO:0002213 ... P93193 22808208 MOAD: Kd=498uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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