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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801 1h60:A (1.6) BS02 STR ? GO:0000166 ... P71278 11428899 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    802 1h61:A (1.4) BS02 PDN ? GO:0000166 ... P71278 11428899 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    803 1h62:A (1.9) BS01 ANB ? GO:0000166 ... P71278 11428899 MOAD: Kd=17uM
    PDBbind: -logKd/Ki=4.77, Kd=17uM
    804 1h6h:A (1.7) BS01 PIB ? GO:0006909 ... Q15080 11684018 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5.0uM
    805 1h82:A (1.9) BS02 GZZ 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=7.5nM
    BindingDB: Ki=7.5nM
    806 1h82:B (1.9) BS02 GZZ 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=7.5nM
    BindingDB: Ki=7.5nM
    807 1h82:C (1.9) BS02 GZZ 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=7.5nM
    BindingDB: Ki=7.5nM
    808 1h83:A (1.9) BS02 DIA 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=300nM
    BindingDB: Ki=300nM
    809 1h83:B (1.9) BS02 DIA 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=300nM
    BindingDB: Ki=300nM
    810 1h83:C (1.9) BS02 DIA 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 11258887 MOAD: Ki=300nM
    BindingDB: Ki=300nM
    811 1h8s:A (2.4) BS01 AIC N/A N/A N/A 11397088 MOAD: Kd=1.54uM
    PDBbind: -logKd/Ki=5.81, Kd=1.54uM
    812 1h9z:A (2.5) BS01 RWF ? GO:0003677 ... P02768 11285262 MOAD: Kd=3.8uM
    PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    BindingDB: Kd=1.2E4nM
    813 1ha2:A (2.5) BS01 SWF ? GO:0003677 ... P02768 11285262 MOAD: Kd=2.9uM
    PDBbind: -logKd/Ki=5.54, Kd=2.9uM
    814 1hbv:A (2.3) BS01 GAN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7650677 MOAD: Ki=430nM
    PDBbind: -logKd/Ki=6.37, Ki=430nM
    815 1hdc:A (2.2) BS01 CBO 1.1.1.53 GO:0008202 ... P19992 7866748 MOAD: Ki=1uM
    816 1hdc:B (2.2) BS01 CBO 1.1.1.53 GO:0008202 ... P19992 7866748 MOAD: Ki=1uM
    817 1hdc:C (2.2) BS01 CBO 1.1.1.53 GO:0008202 ... P19992 7866748 MOAD: Ki=1uM
    818 1hdc:D (2.2) BS01 CBO 1.1.1.53 GO:0008202 ... P19992 7866748 MOAD: Ki=1uM
    819 1hdq:A (2.3) BS01 INF 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    820 1hdr:A (2.5) BS01 NAD 1.5.1.34 GO:0004155 ... P09417 8262916 MOAD: Kd=0.034uM
    821 1hdu:A (1.75) BS02 ING 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=19uM
    822 1hdu:B (1.75) BS02 ING 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=19uM
    823 1hdu:D (1.75) BS02 ING 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=19uM
    824 1hdu:E (1.75) BS02 ING 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=19uM
    825 1hee:A (1.75) BS02 LHY 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    826 1hee:B (1.75) BS02 LHY 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=4.6uM
    827 1hee:D (1.75) BS02 LHY 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=4.6uM
    828 1hee:E (1.75) BS02 LHY 3.4.17.1 GO:0004181 ... P00730 11937361 MOAD: Ki=4.6uM
    829 1heg:E (2.2) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 1429626 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    830 1hex:A (2.5) BS01 NAD 1.1.1.85 GO:0000287 ... Q5SIY4 7881901 MOAD: Ki=614.6uM
    831 1hfp:A (2.1) BS02 MOT 1.5.1.3 GO:0000900 ... P00374 9627670 MOAD: Ki=1036nM
    832 1hfq:A (2.1) BS02 MOT 1.5.1.3 GO:0000900 ... P00374 9627670 MOAD: Ki=2.7nM
    833 1hfr:A (2.1) BS02 MOT 1.5.1.3 GO:0000900 ... P00374 9627670 MOAD: Ki=790nM
    834 1hfs:A (1.7) BS06 L04 3.4.24.17 GO:0004222 ... P08254 9083493 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=2nM
    835 1hi3:A (1.8) BS01 A2P 4.6.1.18 GO:0001530 ... P10153 11154698 MOAD: Ki=64uM
    PDBbind: -logKd/Ki=4.19, Ki=64uM
    836 1hi4:A (1.8) BS01 A3P 4.6.1.18 GO:0001530 ... P10153 11154698 MOAD: Ki=32uM
    PDBbind: -logKd/Ki=4.49, Ki=32uM
    837 1hi5:A (1.8) BS01 ADP 4.6.1.18 GO:0001530 ... P10153 11154698 MOAD: Ki=92uM
    PDBbind: -logKd/Ki=4.04, Ki=92uM
    838 1hih:B (2.2) BS01 C20 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7613867 MOAD: Ki=9nM
    PDBbind: -logKd/Ki=8.05, Ki=9nM
    839 1hii:B (2.3) BS01 C20 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7613867 MOAD: Ki=53nM
    PDBbind: -logKd/Ki=7.28, Ki=53nM
    840 1hiv:A (2.0) BS01 1ZK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 1304383 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki<1.0nM
    841 1hk4:A (2.4) BS01 T44 ? GO:0003677 ... P02768 12743361 MOAD: Kd=4.9uM
    PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    842 1hku:A (2.3) BS01 NAD 1.1.1.- GO:0003714 ... Q9Z2F5 12805226 MOAD: ic50~65nM
    843 1hlf:A (2.26) BS02 GL4 2.4.1.1 GO:0000166 ... P00489 11741774 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    BindingDB: Ki=5100nM
    844 1hlk:A (2.5) BS03 113 3.5.2.6 GO:0008270 ... P25910 12019104 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    845 1hlk:B (2.5) BS03 113 3.5.2.6 GO:0008270 ... P25910 12019104 MOAD: Ki=10uM
    846 1hmr:A (1.4) BS01 ELA ? GO:0005515 ... P05413 7922029 MOAD: Kd=0.28uM
    PDBbind: -logKd/Ki=6.55, Kd=0.28uM
    847 1hn2:A (1.8) BS01 ANC ? GO:0005549 ... P07435 11114310 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    848 1hn2:B (1.8) BS01 ANC ? GO:0005549 ... P07435 11114310 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    849 1hn2:B (1.8) BS02 3OL ? GO:0005549 ... P07435 11114310 MOAD: Kd=3.3uM
    850 1hn4:A (1.5) BS04 MJI 3.1.1.4 GO:0002446 ... P00592 11560489 MOAD: Kd=0.15mM
    PDBbind: -logKd/Ki=3.82, Kd=0.15mM
    851 1hnn:A (2.4) BS02 SKF 2.1.1.28 GO:0004603 ... P11086 11591352 MOAD: Ki=0.58uM
    PDBbind: -logKd/Ki=6.24, Ki=0.58uM
    BindingDB: Ki=280nM
    852 1hnn:B (2.4) BS02 SKF 2.1.1.28 GO:0004603 ... P11086 11591352 MOAD: Ki=0.58uM
    BindingDB: Ki=280nM
    853 1hos:A (2.3) BS01 PHP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8347601 MOAD: Ki=2.8nM
    PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    854 1hp0:A (2.1) BS02 AD3 3.2.2.1 GO:0006139 ... Q9GPQ4 11292348 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    855 1hp0:B (2.1) BS02 AD3 3.2.2.1 GO:0006139 ... Q9GPQ4 11292348 MOAD: Ki=0.2uM
    856 1hpo:B (2.5) BS01 UNI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 9089336 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    857 1hps:B (2.3) BS01 RUN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7932533 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    858 1hps:B (2.3) BS02 RUN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7932533 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    859 1hpv:B (1.9) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 N/A MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.60nM
    860 1hpx:B (2.0) BS01 KNI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8590019 MOAD: Ki=5.5pM
    PDBbind: -logKd/Ki=11.26, Ki=5.5pM
    861 1hq5:A (2.3) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 11258879 MOAD: Kd=2.22uM
    PDBbind: -logKd/Ki=5.65, Kd=2.22uM
    862 1hq5:B (2.3) BS03 S2C 3.5.3.1 GO:0000050 ... P07824 11258879 MOAD: Kd=2.22uM
    863 1hrn:A (1.8) BS01 03D 3.4.23.15 GO:0004190 ... P00797 7608971 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    864 1hrn:B (1.8) BS01 03D 3.4.23.15 GO:0004190 ... P00797 7608971 MOAD: ic50=9nM
    865 1hsg:B (2.0) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 7929352 MOAD: Ki=0.38nM
    PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    866 1hsh:A (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7929352 MOAD: Ki=2.45nM
    PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    867 1hsh:C (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7929352 MOAD: Ki=2.45nM
    868 1hsl:A (1.89) BS01 HIS ? GO:0006865 ... P0AEU0 8161536 MOAD: Kd=0.064uM
    PDBbind: -logKd/Ki=7.19, Kd=0.064uM
    869 1hsl:B (1.89) BS01 HIS ? GO:0006865 ... P0AEU0 8161536 MOAD: Kd=0.064uM
    870 1htb:B (2.4) BS03 NAD 1.1.1.105 GO:0001523 ... P00325 8663387 MOAD: Kd=670uM
    871 1htf:A (2.2) BS01 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    872 1htf:A (2.2) BS02 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    873 1htf:B (2.2) BS01 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    874 1htf:B (2.2) BS02 G26 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=148nM
    PDBbind: -logKd/Ki=6.83, IC50=148nM
    875 1htg:A (2.0) BS01 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=3.8nM
    PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    876 1htg:A (2.0) BS02 G37 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 8031777 MOAD: ic50=3.8nM
    PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    877 1hvh:B (1.8) BS01 Q82 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9554878 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    878 1hvi:A (1.8) BS01 A77 ? GO:0004190 ... O92139 N/A MOAD: Ki=84pM
    PDBbind: -logKd/Ki=10.92, Ki=12pM
    879 1hvj:A (2.0) BS01 A78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 N/A MOAD: Ki=4pM
    PDBbind: -logKd/Ki=11.40, Ki=4pM
    880 1hvk:A (1.8) BS01 A79 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 N/A MOAD: Ki=77pM
    PDBbind: -logKd/Ki=10.96, Ki=11pM
    881 1hvl:B (1.8) BS01 A76 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 N/A MOAD: Ki=1000pM
    PDBbind: -logKd/Ki=9.95, Ki=112pM
    882 1hvr:A (1.8) BS01 XK2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8278812 MOAD: Ki=0.31nM
    PDBbind: -logKd/Ki=9.51, Ki=0.31nM
    883 1hvs:A (2.25) BS01 A77 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 7773792 MOAD: Ki=50pM
    PDBbind: -logKd/Ki=10.30, Ki=50pM
    884 1hw8:A (2.1) BS01 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    885 1hw8:A (2.1) BS02 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    886 1hw8:B (2.1) BS01 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    887 1hw8:B (2.1) BS02 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    888 1hw8:C (2.1) BS01 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    889 1hw8:C (2.1) BS02 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    890 1hw8:D (2.1) BS01 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    891 1hw8:D (2.1) BS02 114 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=23nM
    892 1hw9:A (2.33) BS02 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    893 1hw9:A (2.33) BS04 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    894 1hw9:B (2.33) BS02 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    895 1hw9:B (2.33) BS05 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    896 1hw9:C (2.33) BS02 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    897 1hw9:C (2.33) BS03 SIM 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=11nM
    898 1hwi:A (2.3) BS01 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    899 1hwi:A (2.3) BS03 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    900 1hwi:B (2.3) BS01 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    901 1hwi:B (2.3) BS04 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    902 1hwi:C (2.3) BS01 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    903 1hwi:C (2.3) BS02 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    904 1hwi:D (2.3) BS01 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    905 1hwi:D (2.3) BS03 115 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=28nM
    BindingDB: IC50=28nM
    906 1hwj:A (2.26) BS03 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    907 1hwj:A (2.26) BS04 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    908 1hwj:B (2.26) BS03 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    909 1hwj:B (2.26) BS05 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    910 1hwj:C (2.26) BS03 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    911 1hwj:C (2.26) BS04 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    912 1hwj:D (2.26) BS02 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    913 1hwj:D (2.26) BS04 116 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=10nM
    914 1hwk:A (2.22) BS04 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    915 1hwk:A (2.22) BS05 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    916 1hwk:B (2.22) BS03 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    917 1hwk:B (2.22) BS05 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    918 1hwk:C (2.22) BS01 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    919 1hwk:C (2.22) BS02 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    920 1hwk:D (2.22) BS01 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    921 1hwk:D (2.22) BS03 117 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=8nM
    BindingDB: IC50=6nM, Ki=6.2nM
    922 1hwl:A (2.1) BS03 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    923 1hwl:A (2.1) BS04 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    924 1hwl:B (2.1) BS03 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    925 1hwl:B (2.1) BS04 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    926 1hwl:C (2.1) BS02 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    927 1hwl:C (2.1) BS03 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    928 1hwl:D (2.1) BS02 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    929 1hwl:D (2.1) BS03 FBI 1.1.1.34 GO:0004420 ... P04035 11349148 MOAD: ic50=5nM
    930 1hwr:B (1.8) BS01 216 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9575185 MOAD: Ki=4.7nM
    PDBbind: -logKd/Ki=8.33, Ki=4.70nM
    931 1hww:A (1.87) BS02 SWA 3.2.1.114 GO:0000139 ... Q24451 11406577 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=37nM, Ki=3.0nM
    932 1hxb:A (2.3) BS01 ROC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 1956054 MOAD: Ki=0.12nM
    PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    933 1hxk:A (1.5) BS02 DMJ 3.2.1.114 GO:0000139 ... Q24451 11406577 MOAD: ic50=400uM
    PDBbind: -logKd/Ki=3.40, IC50=400uM
    934 1hxw:B (1.8) BS01 RIT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 7708670 MOAD: Ki=15pM
    PDBbind: -logKd/Ki=10.82, Ki=15pM
    935 1hy7:B (1.5) BS06 MBS 3.4.24.17 GO:0004222 ... P08254 11297453 MOAD: ic50=4090nM
    PDBbind: -logKd/Ki=5.39, IC50=4.09uM
    BindingDB: IC50=4090nM
    936 1hyo:A (1.3) BS04 HBU 3.7.1.2 GO:0003824 ... P35505 11154690 MOAD: Ki=84.8uM
    937 1hyo:B (1.3) BS04 HBU 3.7.1.2 GO:0003824 ... P35505 11154690 MOAD: Ki=84.8uM
    938 1hyv:A (1.7) BS01 TTA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 11264582 MOAD: ic50>5mM
    PDBbind: -logKd/Ki=2.30, IC50>5mM
    939 1hzz:A (2.5) BS01 NAD 7.1.1.1 GO:0000166 ... Q2RSB2 11250201 MOAD: Kd=30uM
    940 1i00:A (2.5) BS02 D16 2.1.1.45 GO:0000900 ... P04818 11316879 MOAD: Ki=0.46uM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    BindingDB: IC50=29000nM
    941 1i00:B (2.5) BS03 D16 2.1.1.45 GO:0000900 ... P04818 11316879 MOAD: Ki=0.46uM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    BindingDB: IC50=29000nM
    942 1i1e:A (2.5) BS01 DM2 3.4.24.69 GO:0004222 ... P10844 11679763 MOAD: Kd=9.4uM
    PDBbind: -logKd/Ki=5.03, Kd=9.4uM
    943 1i4d:D (2.5) BS01 GDP 3.6.5.2 GO:0001764 ... P63000 11346801 MOAD: Kd=3uM
    944 1i5r:A (1.6) BS01 HYC 1.1.1.51
    1.1.1.62    		 GO:0003824 ... P14061 12223444 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    BindingDB: IC50=52nM, Ki=3nM
    945 1i7c:A (2.4) BS02 MGB 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    946 1i7g:A (2.2) BS01 AZ2 ? GO:0003677 ... Q07869 11587644 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: EC50=820nM, Ki=1000nM
    947 1i7m:A (2.24) BS02 CG 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.23nM
    PDBbind: -logKd/Ki=9.64, IC50=0.23nM
    948 1i7m:D (2.24) BS01 CG 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.23nM
    949 1i7z:A (2.3) BS01 COC ? GO:0002250 ... P01834 11469854 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    950 1i7z:C (2.3) BS01 COC ? GO:0002250 ... P01834 11469854 MOAD: Kd=0.4uM
    951 1i80:A (2.0) BS02 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    952 1i80:B (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    953 1i80:C (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    954 1i8z:A (1.93) BS02 INL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.27nM
    PDBbind: -logKd/Ki=8.90, IC50=1.27nM
    BindingDB: Ki=0.15nM, IC50=1.3nM
    955 1i90:A (2.0) BS02 INM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.28nM
    PDBbind: -logKd/Ki=8.89, IC50=1.28nM
    956 1i91:A (2.0) BS02 INQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11831900 MOAD: ic50=1.15nM
    PDBbind: -logKd/Ki=8.94, IC50=1.15nM
    BindingDB: Ki=0.15nM, IC50=1.2nM
    957 1i9l:A (1.93) BS02 INV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    958 1i9l:A (1.93) BS03 INV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    959 1i9m:A (1.84) BS02 INW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    960 1i9m:A (1.84) BS03 INW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    961 1i9n:A (1.86) BS02 IOA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=2.2nM
    PDBbind: -logKd/Ki=8.66, Kd=2.2nM
    962 1i9o:A (1.86) BS02 IOC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.8nM
    PDBbind: -logKd/Ki=8.42, Kd=3.8nM
    BindingDB: Kd=2.3nM
    963 1i9o:A (1.86) BS03 IOC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.8nM
    PDBbind: -logKd/Ki=8.42, Kd=3.8nM
    BindingDB: Kd=2.3nM
    964 1i9p:A (1.92) BS02 IOE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    965 1i9q:A (1.8) BS02 IOF 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.9nM
    966 1i9q:A (1.8) BS03 IOF 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11572683 MOAD: Kd=3.9nM
    967 1ia1:A (1.7) BS02 TQ3 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.034uM
    BindingDB: IC50=34nM
    968 1ia1:B (1.7) BS02 TQ3 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.034uM
    BindingDB: IC50=34nM
    969 1ia2:A (1.82) BS02 TQ4 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.023uM
    BindingDB: IC50=23nM
    970 1ia2:B (1.82) BS02 TQ4 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.023uM
    BindingDB: IC50=23nM
    971 1ia3:A (1.78) BS02 TQ5 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    972 1ia3:B (1.78) BS02 TQ5 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    973 1ia4:A (1.85) BS02 TQ6 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.13uM
    BindingDB: IC50=130nM
    974 1ia4:B (1.85) BS02 TQ6 1.5.1.3 GO:0004146 ... P22906 11520201 MOAD: ic50=0.13uM
    BindingDB: IC50=130nM
    975 1ida:B (1.7) BS01 0PO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 MOAD: ic50<2nM
    PDBbind: -logKd/Ki=8.70, IC50<=2.0nM
    976 1idb:B (2.2) BS01 0DO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 7743130 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    977 1ie3:C (2.5) BS02 PYR 1.1.1.37 GO:0003824 ... P61889 11389141 MOAD: Ki=56mM
    978 1iei:A (2.5) BS02 ZES 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 11914486 MOAD: ic50=44nM
    BindingDB: IC50=8nM
    979 1iep:A (2.1) BS01 STI 2.7.10.2 GO:0004672 ... P00520 12154025 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    BindingDB: IC50=10.8nM
    980 1iep:B (2.1) BS01 STI 2.7.10.2 GO:0004672 ... P00520 12154025 MOAD: ic50=100nM
    BindingDB: IC50=10.8nM
    981 1if7:A (1.98) BS02 SBR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11818565 MOAD: Kd=30pM
    PDBbind: -logKd/Ki=10.52, Kd=30pM
    982 1if8:A (1.94) BS02 SBS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11818565 MOAD: Kd=230pM
    PDBbind: -logKd/Ki=9.64, Kd=230pM
    983 1igb:A (2.3) BS03 IPO 3.4.11.10 GO:0006508 ... Q01693 8647077 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    984 1igj:B (2.5) BS01 DGX N/A N/A N/A 8234291 MOAD: Kd=0.1nM
    985 1igj:D (2.5) BS01 DGX N/A N/A N/A 8234291 MOAD: Kd=0.1nM
    PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    986 1ii5:A (1.6) BS01 GLU ? GO:0015276 ... P73797 11518533 MOAD: Kd=240nM
    PDBbind: -logKd/Ki=6.62, Kd=240nM
    987 1iiq:A (1.83) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 11906284 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    988 1ik4:A (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39nM
    989 1ik4:B (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    990 1ik4:C (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    991 1ik4:D (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    992 1ik4:E (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    993 1ik4:F (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39nM
    994 1ind:H (2.2) BS01 EOT N/A N/A N/A 8218161 MOAD: Ka=11000000000M^-1
    PDBbind: -logKd/Ki=10.05, Kd=0.09nM
    995 1inf:A (2.4) BS02 ST4 3.2.1.18 GO:0004308 ... P03474 7650674 MOAD: ic50=10uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    996 1it6:A (2.0) BS03 CYU 3.1.3.16 GO:0000070 ... P36873 12015153 MOAD: Ki=4.1nM
    PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    997 1it6:B (2.0) BS03 CYU 3.1.3.16 GO:0000070 ... P36873 12015153 MOAD: Ki=4.1nM
    998 1iup:A (1.6) BS01 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    999 1iup:A (1.6) BS02 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1000 1iup:A (1.6) BS03 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218