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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8201 3hdq:E (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8202 3hdq:F (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8203 3hdq:G (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8204 3hdq:H (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8205 3hdq:I (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8206 3hdq:J (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8207 3hdy:A (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8208 3hdy:B (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8209 3hdy:C (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8210 3hdy:D (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8211 3hdy:E (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8212 3hdy:F (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8213 3hdy:G (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8214 3hdy:H (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8215 3hdy:I (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8216 3hdy:J (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    8217 3hdz:A (1.8) BS01 PD6 3.1.4.35
    3.1.4.53    		 GO:0004114 ... O76074
    P27815    		 19540112 MOAD: ic50=51nM
    PDBbind: -logKd/Ki=7.29, IC50=51nM
    8218 3hec:A (2.5) BS01 STI 2.7.11.24 GO:0000077 ... Q16539 20337484 MOAD: Kd=34uM
    PDBbind: -logKd/Ki=4.47, Kd=34.0uM
    BindingDB: Kd=>10000nM, IC50=100000nM
    8219 3heg:A (2.2) BS01 BAX 2.7.11.24 GO:0000077 ... Q16539 20337484 MOAD: Kd=0.18uM
    PDBbind: -logKd/Ki=6.74, Kd=0.18uM
    BindingDB: Kd=370nM, IC50=400nM
    8220 3hek:A (1.95) BS01 BD0 3.6.4.10 GO:0005524 ... P07900 19583220 MOAD: Ki=5.4nM
    PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    8221 3hek:B (1.95) BS01 BD0 3.6.4.10 GO:0005524 ... P07900 19583220 MOAD: Ki=5.4nM
    8222 3hf6:A (1.8) BS02 LX0 1.14.16.4 GO:0004497 ... P17752 19631532 MOAD: ic50=0.026uM
    PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    BindingDB: IC50=26nM
    8223 3hf8:A (1.85) BS02 ML0 1.14.16.4 GO:0004497 ... P17752 20556201 MOAD: Ki=0.31uM
    PDBbind: -logKd/Ki=6.51, Ki=0.31uM
    8224 3hfb:A (1.92) BS02 ML4 1.14.16.4 GO:0004497 ... P17752 20556201 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    BindingDB: IC50=40nM
    8225 3hfg:A (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    8226 3hfg:B (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    8227 3hfg:C (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    8228 3hfg:D (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    8229 3hfj:A (2.02) BS01 DZ9 N/A GO:0003824 ... N/A 19716475 MOAD: ic50=36uM
    PDBbind: -logKd/Ki=4.44, IC50=36uM
    8230 3hgm:A (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    8231 3hgm:B (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    8232 3hgm:C (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    8233 3hgm:D (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    8234 3hhk:A (1.7) BS01 77Z 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 19515564 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    8235 3hhk:B (1.7) BS01 77Z 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 19515564 MOAD: ic50=6nM
    8236 3hhu:A (1.59) BS01 819 3.6.4.10 GO:0005524 ... P07900 19519743 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    8237 3hhu:B (1.59) BS01 819 3.6.4.10 GO:0005524 ... P07900 19519743 MOAD: ic50=41nM
    8238 3hhx:A (2.0) BS02 PYG 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=4.5uM
    8239 3hhy:A (1.55) BS02 CAQ 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=3uM
    8240 3hhy:A (1.55) BS03 CAQ 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=3uM
    8241 3hig:A (2.09) BS04 BRN 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: Ki=13nM
    8242 3hig:B (2.09) BS04 BRN 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: Ki=13nM
    8243 3hii:A (2.149) BS04 PNT 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=290nM
    PDBbind: -logKd/Ki=6.54, Ki=290nM
    BindingDB: Ki=290nM
    8244 3hii:B (2.149) BS04 PNT 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=290nM
    PDBbind: -logKd/Ki=6.54, Ki=290nM
    BindingDB: Ki=290nM
    8245 3hit:A (2.29) BS01 DYN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=6.4nM
    PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    8246 3hit:B (2.29) BS01 DYN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=6.4nM
    8247 3hiv:A (2.14) BS01 TXN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=7.5nM
    PDBbind: -logKd/Ki=8.12, Ki=7.5nM
    8248 3hiv:B (2.14) BS01 TXN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=7.5nM
    8249 3hiw:A (1.8) BS01 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    PDBbind: -logKd/Ki=8.06, Ki=8.7nM
    8250 3hiw:B (1.8) BS01 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    8251 3hiw:B (1.8) BS02 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    8252 3hj8:A (2.4) BS02 4CL 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=1.5uM
    8253 3hjq:A (2.0) BS02 MBD 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=6.5uM
    8254 3hjs:A (1.8) BS02 MCT 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=4uM
    8255 3hk1:A (1.7) BS01 B64 ? GO:0005324 ... P04117 19754198 MOAD: Ki=0.67uM
    PDBbind: -logKd/Ki=6.17, Ki=0.67uM
    8256 3hkw:A (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    8257 3hkw:B (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    8258 3hkw:C (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    8259 3hky:A (1.9) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 20071590 MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=7.10, Kd=80nM
    8260 3hky:B (1.9) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 20071590 MOAD: Kd=2.3nM
    8261 3hl7:A (1.88) BS01 I47 2.7.11.24 GO:0000077 ... Q16539 19496616 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=23nM
    8262 3hl8:A (1.55) BS01 BBP 3.1.11.1 GO:0000175 ... P04995 20018747 MOAD: Ki=32uM
    PDBbind: -logKd/Ki=4.49, Ki=32uM
    8263 3hll:A (1.95) BS01 I45 2.7.11.24 GO:0000077 ... Q16539 19496616 MOAD: Ki=0.0058uM
    PDBbind: -logKd/Ki=8.24, Ki=5.8nM
    BindingDB: IC50=247nM, Kd=2.8nM, Ki=2.9nM
    8264 3hlo:A (1.6) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=0.61uM
    PDBbind: -logKd/Ki=6.21, Kd=0.61uM
    8265 3hmm:A (1.7) BS01 855 2.7.11.30 GO:0004672 ... P36897 19285388 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    8266 3hmo:A (2.4) BS01 STU 2.7.12.1 GO:0004672 ... P33981 20099905 MOAD: Kd=30.5nM
    PDBbind: -logKd/Ki=7.52, Kd=30.5nM
    8267 3hmp:A (2.3) BS01 CX4 2.7.12.1 GO:0004672 ... P33981 20099905 MOAD: Kd=3.24uM
    PDBbind: -logKd/Ki=5.49, Kd=3.24uM
    8268 3ho2:A (2.0) BS01 N32 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=113nM
    PDBbind: -logKd/Ki=6.95, IC50=113nM
    8269 3ho9:A (1.9) BS01 N3A 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=789nM
    PDBbind: -logKd/Ki=6.10, IC50=789nM
    8270 3hok:B (2.19) BS02 Q80 1.14.14.18 GO:0004392 ... P09601 19601578 MOAD: ic50=2.1uM
    8271 3hp9:A (1.6) BS01 CF1 3.1.11.1 GO:0000175 ... P04995 20018747 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    8272 3hpt:B (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    PDBbind: -logKd/Ki=8.19, Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    8273 3hpt:D (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    8274 3hq5:A (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    8275 3hq5:B (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    8276 3hqw:A (1.7) BS02 PF4 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=35nM
    8277 3hqy:A (2.0) BS02 PF6 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=11.5nM
    PDBbind: -logKd/Ki=7.94, IC50=11.5nM
    BindingDB: IC50=11.5nM
    8278 3hqz:A (1.7) BS02 PF8 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.42nM
    PDBbind: -logKd/Ki=9.38, IC50=0.42nM
    BindingDB: IC50=0.42nM
    8279 3hr1:A (1.53) BS01 PF9 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: IC50=0.5nM, Ki=0.17nM
    8280 3hrb:A (2.2) BS01 I39 2.7.11.24 GO:0000077 ... Q16539 19678708 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    8281 3hrf:A (1.9) BS02 P47 2.7.11.1 GO:0004672 ... O15530 19718043 MOAD: Kd=10.3uM
    PDBbind: -logKd/Ki=4.99, Kd=10.3uM
    BindingDB: Kd=10300nM, IC50=9.7e+4nM
    8282 3hs4:A (1.1) BS03 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    8283 3hs4:A (1.1) BS04 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    8284 3hs4:A (1.1) BS05 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    8285 3ht6:A (1.59) BS01 JZ0 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.36mM
    8286 3ht7:A (1.7) BS01 JZ1 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.28mM
    8287 3ht8:A (1.6) BS01 JZ2 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.12mM
    8288 3htb:A (1.81) BS01 JZ4 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=73.9uM
    8289 3hu3:A (2.2) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    8290 3hu3:B (2.2) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    8291 3hu8:A (1.8) BS01 261 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.79mM
    8292 3hua:A (1.4) BS01 JZ9 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.278mM
    8293 3hub:A (2.25) BS01 469 2.7.11.24 GO:0000077 ... Q16539 20201574 MOAD: Kd=8.2nM
    PDBbind: -logKd/Ki=8.09, Kd=8.2nM
    BindingDB: IC50=9nM, Kd=0.480000nM
    8294 3huc:A (1.8) BS01 G97 2.7.11.24 GO:0000077 ... Q16539 20201574 MOAD: Kd=1030nM
    PDBbind: -logKd/Ki=5.99, Kd=1030nM
    8295 3huk:A (1.29) BS01 J0Z 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.35mM
    8296 3huq:A (1.45) BS01 J1Z 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.25mM
    8297 3hv3:A (2.0) BS01 R49 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=900nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    BindingDB: IC50=900nM
    8298 3hv5:A (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=7.02, IC50=95nM
    BindingDB: IC50=95nM
    8299 3hv5:B (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    BindingDB: IC50=95nM
    8300 3hv6:A (1.95) BS01 R39 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=5500nM
    PDBbind: -logKd/Ki=5.64, IC50=2300nM
    BindingDB: IC50=5500nM, koff=0.003900s-1, kon=13000M-1-s-1, Kd=300nM
    8301 3hv7:A (2.4) BS01 1AU 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: Kd~12nM
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    BindingDB: Kd=12nM, IC50=170nM
    8302 3hv8:A (1.445) BS01 C2E 3.1.4.52 N/A Q9HUK6 19679088 MOAD: Kd=104.2nM
    PDBbind: -logKd/Ki=6.98, Kd=104.2nM
    8303 3hvc:A (2.1) BS01 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    8304 3hvc:A (2.1) BS02 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    8305 3hvg:A (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    PDBbind: -logKd/Ki=2.70, IC50=2mM
    BindingDB: Kd=4450000nM
    8306 3hvg:B (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    8307 3hvg:B (2.26) BS02 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    8308 3hvh:A (1.3) BS01 542 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    8309 3hvi:A (1.2) BS02 619 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    8310 3hvj:A (1.79) BS01 705 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    8311 3hvj:B (1.79) BS01 705 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=2nM
    8312 3hvk:A (1.3) BS02 719 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    8313 3hw1:A (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    PDBbind: -logKd/Ki=3.06, IC50=0.87mM
    8314 3hw1:B (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    8315 3hw1:C (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    8316 3hww:A (1.95) BS01 AKG 2.2.1.9 GO:0000287 ... P17109 19703421 MOAD: Kd=75nM
    PDBbind: -logKd/Ki=7.12, Kd=75nM
    8317 3hww:D (1.95) BS01 AKG 2.2.1.9 GO:0000287 ... P17109 19703421 MOAD: Kd=75nM
    PDBbind: -logKd/Ki=7.12, Kd=75nM
    8318 3hx3:A (1.69) BS01 RET ? GO:0005502 ... P12271 19846785 MOAD: Kd~10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    8319 3hxg:A (2.1) BS02 GTA N/A GO:0003723 ... N/A 19710013 MOAD: Kd=0.27uM
    8320 3hy7:A (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    PDBbind: -logKd/Ki=6.97, IC50=106nM
    BindingDB: IC50=10000nM
    8321 3hy7:B (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    BindingDB: IC50=10000nM
    8322 3hy8:A (2.5) BS01 FMN 1.4.3.5 GO:0004733 ... Q9NVS9 19759001 MOAD: Kd=672nM
    8323 3hy9:A (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=12nM
    8324 3hy9:B (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    BindingDB: IC50=12nM
    8325 3hyf:A (1.7) BS03 ON1 3.1.26.13
    3.1.26.4    		 GO:0003676 ... P0A7Y4
    Q72547    		 19791799 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    8326 3hyg:A (1.4) BS05 099 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=93nM
    PDBbind: -logKd/Ki=7.03, IC50=93nM
    8327 3hyg:B (1.4) BS05 099 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=93nM
    8328 3hzl:A (1.55) BS02 6PC ? GO:0000166 ... Q9X9P9 19702312 MOAD: Kd=3000uM
    8329 3i1y:A (2.469) BS01 33N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    8330 3i25:A (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    BindingDB: Ki=3.1nM
    8331 3i25:B (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    8332 3i25:C (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    8333 3i28:A (1.95) BS01 34N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=8nM, EC50=0.14nM
    8334 3i3b:A (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    PDBbind: -logKd/Ki=2.23, Ki=5.9mM
    8335 3i3b:B (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    8336 3i3b:C (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    8337 3i3b:D (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    PDBbind: -logKd/Ki=2.23, Ki=5.9mM
    8338 3i3d:A (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8339 3i3d:A (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8340 3i3d:B (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8341 3i3d:C (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8342 3i3d:D (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8343 3i3d:D (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    8344 3i4b:A (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    8345 3i4b:B (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    8346 3i4v:A (2.0) BS02 3CE 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.7uM
    8347 3i4y:A (1.85) BS02 35C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.09uM
    PDBbind: -logKd/Ki=7.05, Ki=0.09uM
    8348 3i51:A (1.8) BS02 45C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    8349 3i5n:A (2.0) BS01 B2D 2.7.10.1 GO:0004672 ... P08581 19819693 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=17nM
    8350 3i5z:A (2.2) BS01 Z48 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=4nM
    8351 3i60:A (2.5) BS01 E86 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki<2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=<2nM
    8352 3i65:A (2.0) BS01 JZ8 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.047uM
    8353 3i68:A (2.4) BS01 J4Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.056uM
    BindingDB: IC50=56nM
    8354 3i6c:A (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    8355 3i6c:A (1.3) BS02 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    8356 3i6c:B (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    8357 3i6o:B (1.17) BS01 GR6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19746963 MOAD: Ki=45pM
    PDBbind: -logKd/Ki=10.35, Ki=45pM
    8358 3i6r:A (2.5) BS01 J5Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.28uM
    BindingDB: IC50=280nM
    8359 3i73:A (2.4) BS01 ADP 3.1.-.-
    7.1.2.2    		 GO:0005524 ... O57728 19944110 MOAD: Kd=3.23uM
    PDBbind: -logKd/Ki=5.49, Kd=3.23uM
    8360 3i7b:A (1.988) BS01 BK1 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.066uM
    PDBbind: -logKd/Ki=7.18, IC50=0.066uM
    BindingDB: IC50=128nM
    8361 3i7c:A (1.98) BS01 BK2 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    BindingDB: IC50=15.0nM
    8362 3i7e:A (1.7) BS01 DJR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 19746963 MOAD: Ki=14pM
    PDBbind: -logKd/Ki=10.85, Ki=14pM
    8363 3i7g:A (1.95) BS06 732 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=430nM
    PDBbind: -logKd/Ki=6.37, IC50=430nM
    BindingDB: IC50=430nM
    8364 3i7i:A (2.208) BS06 518 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=620nM
    PDBbind: -logKd/Ki=6.21, IC50=620nM
    BindingDB: IC50=620nM
    8365 3i7s:A (2.3) BS01 PYR 4.3.3.7 GO:0005737 ... P0A6L2 20353808 MOAD: Kd=0.0299mM
    8366 3i7s:B (2.3) BS01 PYR 4.3.3.7 GO:0005737 ... P0A6L2 20353808 MOAD: Kd=0.0299mM
    8367 3i81:A (2.08) BS01 EBI 2.7.10.1 GO:0004672 ... P08069 19778024 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=2nM
    8368 3i8a:X (2.41) BS01 N22 1.5.1.3 GO:0004146 ... P0A017 20026215 MOAD: Ki=0.12uM
    8369 3i8p:A (1.9) BS01 840 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=19nM
    8370 3i8w:A (1.7) BS01 CB5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19874035 MOAD: Ki=4.9nM
    8371 3i9g:L (1.9) BS03 S1P N/A N/A N/A 19815502 MOAD: Kd=1.1nM
    PDBbind: -logKd/Ki=8.96, Kd=1.1nM
    8372 3ia6:A (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM, EC50=13nM
    8373 3ia6:B (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    BindingDB: IC50=3nM, EC50=13nM
    8374 3iaw:A (1.61) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=1.57uM
    PDBbind: -logKd/Ki=5.80, Kd=1.57uM
    8375 3iaz:A (2.0) BS01 AIN 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=330uM
    8376 3ib1:A (2.2) BS04 IMN 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=260uM
    8377 3ib2:A (2.29) BS01 IBP 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=480uM
    8378 3ibi:A (1.93) BS02 BOW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=2.6nM
    PDBbind: -logKd/Ki=8.59, Ki=2.6nM
    BindingDB: Ki=2.6nM
    8379 3ibl:A (1.55) BS02 O59 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=14.6nM
    PDBbind: -logKd/Ki=7.84, Ki=14.6nM
    BindingDB: Ki=14.6nM
    8380 3ibn:A (2.2) BS02 O60 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=24.5nM
    PDBbind: -logKd/Ki=7.61, Ki=24.5nM
    BindingDB: Ki=24.5nM
    8381 3ibu:A (1.41) BS02 O48 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.7nM
    8382 3ie3:A (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    PDBbind: -logKd/Ki=6.68, Kd=0.21uM
    BindingDB: IC50=800nM
    8383 3ie3:B (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    BindingDB: IC50=800nM
    8384 3iej:A (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM
    8385 3iej:B (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    BindingDB: IC50=220nM
    8386 3ieo:A (2.0) BS02 AMJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20028100 MOAD: Ki=331nM
    PDBbind: -logKd/Ki=6.48, Ki=331nM
    8387 3ies:A (2.0) BS01 M24 1.13.12.7 GO:0001676 ... P08659 20194791 MOAD: Kd~120pM
    PDBbind: -logKd/Ki=9.92, Kd=120pM
    8388 3if7:A (1.6) BS05 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    8389 3if7:A (1.6) BS06 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    8390 3if7:A (1.6) BS07 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    8391 3if7:A (1.6) BS08 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    8392 3ig6:B (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    8393 3ig6:B (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    8394 3ig6:D (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    8395 3ig6:D (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    8396 3ig7:A (1.8) BS01 EFP 2.7.11.22 GO:0000082 ... P24941 19700321 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=7.20, IC50=63nM
    8397 3igb:A (2.238) BS01 454 3.4.23.46 GO:0004190 ... P56817 19757823 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    BindingDB: IC50=38000nM, EC50=16000nM
    8398 3igg:A (1.8) BS01 EFQ 2.7.11.22 GO:0000082 ... P24941 19700321 MOAD: ic50=95nM
    PDBbind: -logKd/Ki=7.18, IC50=66.5nM
    8399 3igp:A (1.65) BS02 DT7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20170095 MOAD: Ki=32.8nM
    PDBbind: -logKd/Ki=7.02, Ki=94.5nM
    8400 3igp:A (1.65) BS03 DT7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20170095 MOAD: Ki=32.8nM
    PDBbind: -logKd/Ki=7.02, Ki=94.5nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218