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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8001 3gbe:A (1.7) BS01 NOJ 5.4.99.11 GO:0004556 ... D0VX20 19427862 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    8002 3gc4:A (1.8) BS01 AAQ 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    8003 3gc5:A (1.4) BS02 2MQ 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=55nM
    PDBbind: -logKd/Ki=7.26, Ki=55nM
    8004 3gc7:A (1.8) BS01 B45 2.7.11.24 GO:0000077 ... Q16539 19622861 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    BindingDB: IC50=5.6nM
    8005 3gcp:A (2.25) BS01 SB2 2.7.11.24 GO:0000077 ... Q16539 19572644 MOAD: Kd=15nM
    PDBbind: -logKd/Ki=7.82, Kd=15nM
    8006 3gcq:A (2.0) BS01 1BU 2.7.11.24 GO:0000077 ... Q16539 19572644 MOAD: Kd=342nM
    PDBbind: -logKd/Ki=6.47, Kd=342nM
    BindingDB: IC50=800nM
    8007 3gcs:A (2.1) BS01 BAX 2.7.11.24 GO:0000077 ... Q16539 19572644 MOAD: Kd=56nM
    PDBbind: -logKd/Ki=7.25, Kd=56nM
    BindingDB: Kd=370nM, IC50=400nM
    8008 3gcv:A (2.3) BS01 SS6 2.7.11.24 GO:0000077 ... Q16539 19572644 MOAD: Kd=74nM
    PDBbind: -logKd/Ki=7.13, Kd=74nM
    BindingDB: IC50=420nM
    8009 3ge7:A (1.5) BS02 AFQ 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    8010 3gf4:A (2.45) BS02 UPG 5.4.99.9 GO:0008767 ... Q48485 19500588 MOAD: Kd=750uM
    8011 3gfe:A (2.1) BS01 P37 2.7.11.24 GO:0000077 ... Q16539 19574047 MOAD: ic50=3.2nM
    PDBbind: -logKd/Ki=8.49, IC50=3.2nM
    BindingDB: IC50=3.2nM
    8012 3ggu:B (1.8) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19535439 MOAD: Ki=170pM
    PDBbind: -logKd/Ki=9.77, Ki=170pM
    8013 3ghw:A (1.24) BS01 GHW 1.5.1.3 GO:0000900 ... P00374 19719239 MOAD: Kd=0.02uM
    BindingDB: IC50=20nM
    8014 3gi3:A (2.4) BS01 B10 2.7.11.24 GO:0000077 ... Q16539 19356929 MOAD: Kd<1.8nM
    8015 3gi4:A (1.85) BS01 K60 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 20237088 MOAD: Ki=0.016nM
    PDBbind: -logKd/Ki=10.80, Ki=16pM
    8016 3gi5:A (1.8) BS01 K62 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 20237088 MOAD: Ki=0.006nM
    PDBbind: -logKd/Ki=11.22, Ki=6pM
    8017 3gi6:A (1.84) BS01 D78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 20237088 MOAD: Ki=0.006nM
    PDBbind: -logKd/Ki=11.22, Ki=6pM
    8018 3gjw:A (2.3) BS01 GJW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 19553114 MOAD: Ki=0.005uM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: EC50=6nM, Ki=5nM
    8019 3gk1:A (2.1) BS03 32A ? GO:0005509 ... P02638 19469484 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    8020 3gk2:A (1.984) BS03 27A ? GO:0005509 ... P02638 19469484 MOAD: Kd=2mM
    PDBbind: -logKd/Ki=2.70, Kd=2mM
    8021 3gk4:X (1.9) BS03 53A ? GO:0005509 ... P02638 19469484 MOAD: Kd=120uM
    PDBbind: -logKd/Ki=3.92, Kd=120uM
    8022 3gkz:A (1.9) BS01 B40 N/A N/A N/A 19760665 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    8023 3gm0:A (2.4) BS01 B41 N/A N/A N/A 19760665 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    8024 3gn0:A (1.7) BS03 DMO 3.5.3.1 GO:0000050 ... P05089 21728378 MOAD: Ki=3.9mM
    8025 3gn0:B (1.7) BS03 DMO 3.5.3.1 GO:0000050 ... P05089 21728378 MOAD: Ki=3.9mM
    8026 3gn1:C (2.0) BS02 AX7 ? GO:0000166 ... O76290 19527033 MOAD: Ki=288uM
    BindingDB: Ki=288000nM
    8027 3gn1:D (2.0) BS02 AX7 ? GO:0000166 ... O76290 19527033 MOAD: Ki=288uM
    BindingDB: Ki=288000nM
    8028 3gn2:A (1.6) BS02 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8029 3gn2:A (1.6) BS03 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8030 3gn2:B (1.6) BS02 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8031 3gn2:C (1.6) BS02 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8032 3gn2:D (1.6) BS02 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8033 3gn2:D (1.6) BS03 AX8 ? GO:0000166 ... O76290 19527033 MOAD: Ki=0.4uM
    BindingDB: Ki=400nM
    8034 3gni:B (2.35) BS01 ATP ? GO:0004672 ... Q7RTN6 19513107 MOAD: Kd=0.02uM
    8035 3gnw:A (2.39) BS01 XNC 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 19507864 MOAD: Kd=0.79nM
    PDBbind: -logKd/Ki=9.10, Kd=0.79nM
    8036 3gnw:B (2.39) BS01 XNC 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 19507864 MOAD: Kd=0.79nM
    8037 3gpb:A (2.3) BS01 G1P 2.4.1.1 GO:0000166 ... P00489 2125493 MOAD: Kd=9.5mM
    8038 3gpb:A (2.3) BS02 G1P 2.4.1.1 GO:0000166 ... P00489 2125493 MOAD: Kd=9.5mM
    8039 3gpo:A (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    8040 3gpo:B (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    8041 3gpo:C (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    8042 3gpo:D (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    8043 3gqz:A (1.8) BS01 GF7 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=6.7mM
    PDBbind: -logKd/Ki=2.17, Ki=6.7mM
    8044 3gr2:A (1.8) BS01 GF4 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=3mM
    PDBbind: -logKd/Ki=2.52, Ki=3mM
    8045 3gr6:A (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    8046 3gr6:A (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    8047 3gr6:D (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    8048 3gr6:D (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    8049 3gr6:G (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    8050 3gr6:G (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    8051 3gr6:J (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    8052 3gr6:J (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    8053 3grj:A (2.49) BS01 G14 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Ki=1mM
    8054 3grj:B (2.49) BS01 G14 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=1mM
    8055 3gsg:A (2.1) BS01 GF1 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2mM
    PDBbind: -logKd/Ki=2.70, Ki=2mM
    8056 3gsg:B (2.1) BS01 GF1 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2mM
    8057 3gst:A (1.9) BS01 GPR 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    8058 3gst:B (1.9) BS01 GPR 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    8059 3gtc:A (1.9) BS01 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    PDBbind: -logKd/Ki=2.35, Ki=4.5mM
    8060 3gtc:A (1.9) BS02 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    PDBbind: -logKd/Ki=2.35, Ki=4.5mM
    8061 3gtc:B (1.9) BS01 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    8062 3gtc:B (1.9) BS02 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    8063 3gtc:B (1.9) BS03 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    8064 3gul:A (2.07) BS01 PYJ 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=22800M^-1
    8065 3gul:B (2.07) BS01 PYJ 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=22800M^-1
    8066 3gum:A (2.24) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=6610M^-1
    BindingDB: Kd=151000nM
    8067 3gum:B (2.24) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=6610M^-1
    BindingDB: Kd=151000nM
    8068 3guo:A (2.16) BS01 IPH 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=9150M^-1
    BindingDB: Kd=103000nM
    8069 3guo:B (2.16) BS01 IPH 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=9150M^-1
    BindingDB: Kd=103000nM
    8070 3gus:A (1.53) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=900nM
    BindingDB: IC50=800nM
    8071 3gus:B (1.53) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.9uM
    BindingDB: IC50=800nM
    8072 3gv9:A (1.8) BS01 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    8073 3gv9:A (1.8) BS02 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    8074 3gv9:A (1.8) BS03 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    8075 3gv9:B (1.8) BS01 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    8076 3gvb:A (1.8) BS01 3GV 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2.6mM
    PDBbind: -logKd/Ki=2.59, Ki=2.6mM
    8077 3gw5:A (2.0) BS01 72X 3.4.23.15 GO:0004190 ... P00797 19457666 MOAD: ic50=0.47nM
    PDBbind: -logKd/Ki=9.33, IC50=0.47nM
    BindingDB: IC50=0.47nM
    8078 3gw5:B (2.0) BS01 72X 3.4.23.15 GO:0004190 ... P00797 19457666 MOAD: ic50=0.47nM
    BindingDB: IC50=0.47nM
    8079 3gwt:A (1.75) BS01 066 3.1.4.53 GO:0004114 ... Q07343 19656678 MOAD: ic50=7.94pM
    PDBbind: -logKd/Ki=11.10, IC50=7.94pM
    BindingDB: IC50=0.00794nM
    8080 3gwu:A (2.14) BS02 SRE ? GO:0005886 ... O67854 19430461 MOAD: ic50=19.7uM
    PDBbind: -logKd/Ki=4.71, IC50=19.7uM
    8081 3gwv:A (2.35) BS02 RFX ? GO:0005886 ... O67854 19430461 MOAD: ic50=2.54mM
    PDBbind: -logKd/Ki=2.60, IC50=2.54mM
    8082 3gww:A (2.46) BS02 SFX ? GO:0005886 ... O67854 19430461 MOAD: ic50=355mM
    PDBbind: -logKd/Ki=0.45, IC50=355mM
    8083 3gwx:A (2.4) BS01 EPA ? GO:0003677 ... Q03181 10198642 MOAD: ic50=4uM
    PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: IC50=4000nM
    8084 3gwx:B (2.4) BS01 EPA ? GO:0003677 ... Q03181 10198642 MOAD: ic50=4uM
    BindingDB: IC50=4000nM
    8085 3gx0:A (2.3) BS01 GDS 1.11.1.-
    1.8.4.-    		 GO:0004601 ... P77526 19537707 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=3.48, Kd=330uM
    8086 3gxl:A (1.8) BS01 QIG 2.7.11.30 GO:0004672 ... P36897 19285388 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=>10000nM
    8087 3gy2:A (1.57) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.80uM
    8088 3gy3:A (1.7) BS02 PNT 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=2.36uM
    PDBbind: -logKd/Ki=5.63, Kd=2.36uM
    8089 3gy4:A (1.55) BS02 PBZ 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    8090 3gy5:A (1.57) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    8091 3gy6:A (1.7) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    8092 3gy7:A (1.55) BS02 BEN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    8093 3gy8:A (1.75) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    8094 3gyf:A (1.7) BS01 51P 1.5.1.3 GO:0000900 ... P00374 19652333 MOAD: ic50=12.3nM
    BindingDB: IC50=1900nM
    8095 3gyn:A (2.15) BS01 B42 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19796938 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.21, IC50=0.061uM
    8096 3gyn:B (2.15) BS01 B42 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19796938 MOAD: ic50=0.047uM
    8097 3gz8:A (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8098 3gz8:A (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8099 3gz8:B (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8100 3gz8:B (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8101 3gz8:C (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8102 3gz8:C (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8103 3gz8:D (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8104 3gz8:D (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    8105 3gz9:A (2.0) BS02 D32 ? GO:0003677 ... Q03181 19464171 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=54nM, Ki=4nM
    8106 3h03:A (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    PDBbind: -logKd/Ki=3.87, IC50=135uM
    8107 3h03:B (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    8108 3h03:D (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    8109 3h03:G (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    8110 3h0a:D (2.1) BS02 D30 ? GO:0003677 ... P37231 19464171 MOAD: Ki=0.033uM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    BindingDB: EC50=160nM, Ki=33nM
    8111 3h0v:A (2.24) BS01 M2T 4.1.1.50 GO:0004014 ... P17707 19527050 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    8112 3h0w:A (1.81) BS01 N8M 4.1.1.50 GO:0004014 ... P17707 19527050 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: IC50=600nM
    8113 3h0y:A (2.5) BS01 48B 2.7.11.1 GO:0000212 ... O14965 19402633 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6nM
    8114 3h1x:A (1.4) BS01 IMN 3.1.1.4 GO:0004623 ... P59071 19462410 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    8115 3h21:A (2.32) BS01 B52 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.8uM
    PDBbind: -logKd/Ki=4.70, IC50=19.8uM
    BindingDB: IC50=19800nM
    8116 3h21:B (2.32) BS01 B52 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.8uM
    BindingDB: IC50=19800nM
    8117 3h22:A (2.4) BS01 B53 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=8uM
    PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    8118 3h22:B (2.4) BS01 B53 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=8uM
    BindingDB: IC50=8000nM
    8119 3h23:A (2.2) BS01 B54 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.3uM
    PDBbind: -logKd/Ki=4.71, IC50=19.3uM
    BindingDB: IC50=19300nM
    8120 3h23:B (2.2) BS01 B54 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.3uM
    BindingDB: IC50=19300nM
    8121 3h26:A (2.5) BS01 B56 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=32.4uM
    PDBbind: -logKd/Ki=4.49, IC50=32.4uM
    BindingDB: Kd=5260nM, IC50=32400nM
    8122 3h26:B (2.5) BS01 B56 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=32.4uM
    BindingDB: Kd=5260nM, IC50=32400nM
    8123 3h2a:A (2.4) BS01 B57 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=108.9uM
    PDBbind: -logKd/Ki=3.96, IC50=108.9uM
    BindingDB: IC50=108900nM
    8124 3h2a:B (2.4) BS01 B57 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=108.9uM
    BindingDB: IC50=108900nM
    8125 3h2f:A (2.2) BS01 B60 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=86.7uM
    PDBbind: -logKd/Ki=4.06, IC50=86.7uM
    BindingDB: IC50=86700nM
    8126 3h2f:B (2.2) BS01 B60 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=86.7uM
    BindingDB: IC50=86700nM
    8127 3h2m:A (2.31) BS01 B61 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=215uM
    PDBbind: -logKd/Ki=3.67, IC50=215uM
    BindingDB: IC50=215000nM
    8128 3h2m:B (2.31) BS01 B61 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=215uM
    BindingDB: IC50=215000nM
    8129 3h2n:A (2.4) BS01 B62 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=212.6uM
    PDBbind: -logKd/Ki=3.67, IC50=212.6uM
    8130 3h2n:B (2.4) BS01 B62 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=212.6uM
    8131 3h30:A (1.56) BS01 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    PDBbind: -logKd/Ki=4.53, Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    8132 3h30:A (1.56) BS02 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    PDBbind: -logKd/Ki=4.53, Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    8133 3h30:B (1.56) BS01 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    8134 3h3c:A (2.0) BS01 P1E 2.7.10.2 GO:0004672 ... Q14289 19428251 MOAD: ic50=140nM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=88nM
    8135 3h4g:A (1.85) BS02 FID 1.1.1.19
    1.1.1.2
    1.1.1.20
    1.1.1.372
    1.1.1.54
    1.6.-.-    		 GO:0004032 ... P50578 16107153 MOAD: ic50=2.5uM
    8136 3h4v:A (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8137 3h4v:B (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8138 3h4v:C (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8139 3h4v:D (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8140 3h4v:E (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8141 3h4v:F (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8142 3h4v:G (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8143 3h4v:H (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    8144 3h5b:B (1.29) BS01 031 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19473017 MOAD: Ki=0.099nM
    PDBbind: -logKd/Ki=10.00, Ki=0.099nM
    8145 3h5s:A (2.0) BS01 H5S 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    8146 3h5s:B (2.0) BS01 H5S 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.005uM
    8147 3h5u:A (1.95) BS01 H5U 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    8148 3h5u:B (1.95) BS01 H5U 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.003uM
    8149 3h6k:A (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8150 3h6k:B (2.187) BS01 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8151 3h6k:B (2.187) BS03 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8152 3h6k:C (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8153 3h6k:C (2.187) BS03 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8154 3h6k:D (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    8155 3h7r:A (1.4) BS01 NAP 1.1.1.- GO:0004033 ... O80944 19616008 MOAD: Kd=584nM
    8156 3h7u:A (1.25) BS01 NAP 1.1.1.- GO:0004033 ... Q0PGJ6 19616008 MOAD: Kd=163nM
    8157 3h7w:A (1.65) BS01 018 ? N/A Q99814 19950993 MOAD: Kd=0.59uM
    8158 3h82:A (1.5) BS01 020 ? N/A Q99814 19950993 MOAD: Kd=1.5uM
    8159 3h89:A (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=0.023uM
    8160 3h89:B (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    8161 3h89:C (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    8162 3h89:D (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    8163 3h89:E (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    8164 3h89:F (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    8165 3h8b:A (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    PDBbind: -logKd/Ki=6.29, Ki=0.511uM
    8166 3h8b:A (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    PDBbind: -logKd/Ki=6.29, Ki=0.511uM
    8167 3h8b:B (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8168 3h8b:B (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8169 3h8b:C (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8170 3h8b:C (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8171 3h8b:D (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8172 3h8b:D (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8173 3h8b:E (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8174 3h8b:E (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8175 3h8b:F (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8176 3h8b:F (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    8177 3h8c:A (2.5) BS01 NSZ 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.019uM
    PDBbind: -logKd/Ki=7.72, Ki=0.019uM
    8178 3h8c:B (2.5) BS01 NSZ 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.019uM
    8179 3h98:A (1.9) BS01 B5P 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19500983 MOAD: ic50<0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    8180 3h98:B (1.9) BS01 B5P 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19500983 MOAD: ic50<0.005uM
    8181 3h9o:A (2.3) BS01 9BD 2.7.11.1 GO:0004672 ... O15530 19628388 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    8182 3ha6:A (2.36) BS01 2JZ 2.7.11.1 GO:0000212 ... O14965 19648931 MOAD: ic50=2.1uM
    PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    8183 3hab:A (2.1) BS01 677 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0042uM
    PDBbind: -logKd/Ki=8.38, IC50=4.2nM
    BindingDB: IC50=42nM
    8184 3hab:B (2.1) BS01 677 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0042uM
    BindingDB: IC50=42nM
    8185 3hac:A (2.0) BS01 361 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0083uM
    PDBbind: -logKd/Ki=8.17, IC50=6.7nM
    BindingDB: EC50=112nM, IC50=67nM
    8186 3hac:B (2.0) BS01 361 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0083uM
    BindingDB: EC50=112nM, IC50=67nM
    8187 3had:A (2.0) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 10231530 MOAD: Kd=85.5uM
    8188 3had:B (2.0) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 10231530 MOAD: Kd=85.5uM
    8189 3hau:A (1.3) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=0.42uM
    PDBbind: -logKd/Ki=6.38, Kd=0.42uM
    8190 3haw:B (1.3) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=1.01uM
    PDBbind: -logKd/Ki=6.00, Kd=1.01uM
    8191 3hb5:X (2.0) BS02 E2B 1.1.1.51
    1.1.1.62    		 GO:0003824 ... P14061 19929851 MOAD: Ki=0.9nM
    BindingDB: IC50=27nM
    8192 3hbo:A (1.71) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=8.2uM
    PDBbind: -logKd/Ki=5.09, Kd=8.2uM
    8193 3hc8:A (1.79) BS01 PD4 3.1.4.35
    3.1.4.53    		 GO:0004114 ... O76074
    P27815    		 19539468 MOAD: ic50=2.9nM
    PDBbind: -logKd/Ki=8.54, IC50=2.9nM
    8194 3hcc:A (2.3) BS01 LT3 2.1.1.28 GO:0004603 ... P11086 19570037 MOAD: Ki=13uM
    BindingDB: Ki=13000nM
    8195 3hcc:B (2.3) BS01 LT3 2.1.1.28 GO:0004603 ... P11086 19570037 MOAD: Ki=13uM
    BindingDB: Ki=13000nM
    8196 3hdk:B (1.8) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=17.5uM
    PDBbind: -logKd/Ki=4.76, Kd=17.5uM
    8197 3hdq:A (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8198 3hdq:B (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8199 3hdq:C (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    8200 3hdq:D (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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