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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7001 3byo:A (2.0) BS01 AM9 2.7.10.2 GO:0004672 ... P06239 18278858 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=1600nM
    7002 3bys:A (2.2) BS01 AM5 2.7.10.2 GO:0004672 ... P06239 18321037 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: IC50=0.5nM
    7003 3byu:A (2.3) BS01 AM6 2.7.10.2 GO:0004672 ... P06239 18321037 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    BindingDB: IC50=0.8nM
    7004 3bz3:A (2.2) BS01 YAM 2.7.10.2 GO:0004672 ... Q05397 18339875 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=1.5nM
    7005 3bzu:A (2.25) BS02 A21 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18069989 MOAD: ic50=14nM
    BindingDB: Ki=22nM
    7006 3bzu:B (2.25) BS02 A21 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18069989 MOAD: ic50=14nM
    BindingDB: Ki=22nM
    7007 3bzu:C (2.25) BS02 A21 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18069989 MOAD: ic50=14nM
    BindingDB: Ki=22nM
    7008 3bzu:D (2.25) BS02 A21 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18069989 MOAD: ic50=14nM
    BindingDB: Ki=22nM
    7009 3c0z:A (2.1) BS03 SHH 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=113uM
    PDBbind: -logKd/Ki=3.95, IC50=113uM
    BindingDB: IC50=>10000nM, Ki=129nM, Kd=36000nM
    7010 3c0z:B (2.1) BS03 SHH 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=113uM
    BindingDB: IC50=>10000nM, Ki=129nM, Kd=36000nM
    7011 3c0z:C (2.1) BS03 SHH 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=113uM
    BindingDB: IC50=>10000nM, Ki=129nM, Kd=36000nM
    7012 3c10:A (2.0) BS03 TSN 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.3uM
    BindingDB: IC50=22nM, Ki=195nM
    7013 3c10:B (2.0) BS03 TSN 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=0.3uM
    BindingDB: IC50=22nM, Ki=195nM
    7014 3c10:C (2.0) BS03 TSN 3.5.1.-
    3.5.1.98    		 N/A Q8WUI4 18285338 MOAD: ic50=0.3uM
    BindingDB: IC50=22nM, Ki=195nM
    7015 3c1k:A (1.84) BS02 T15 3.4.21.5 GO:0004252 ... P00734 18291642 MOAD: Ki=0.36nM
    PDBbind: -logKd/Ki=9.44, Ki=0.36nM
    7016 3c1x:A (2.17) BS01 CKK 2.7.10.1 GO:0004672 ... P08581 18289854 MOAD: ic50=0.045uM
    PDBbind: -logKd/Ki=7.35, IC50=0.045uM
    BindingDB: IC50=45nM
    7017 3c2f:A (2.35) BS01 PRP 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=10.1mM
    PDBbind: -logKd/Ki=2.00, Kd=10.1mM
    7018 3c2o:A (2.3) BS01 NTM 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=0.45mM
    PDBbind: -logKd/Ki=3.35, Kd=0.45mM
    7019 3c2r:A (2.4) BS01 PHT 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=0.78mM
    PDBbind: -logKd/Ki=3.11, Kd=0.78mM
    7020 3c2r:B (2.4) BS01 PHT 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=0.78mM
    PDBbind: -logKd/Ki=3.11, Kd=0.78mM
    7021 3c2v:A (2.29) BS01 PRP 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=10.1mM
    7022 3c2v:A (2.29) BS02 PHT 2.4.2.19 GO:0004514 ... P43619 18321072 MOAD: Kd=0.78mM
    7023 3c2y:A (1.78) BS02 S60 2.4.2.29 GO:0002099 ... P28720 19199329 MOAD: Ki=1.5uM
    BindingDB: Ki=1.5e+3nM
    7024 3c3d:A (2.5) BS02 FO1 2.7.8.28 GO:0000287 ... Q8PVT6 18252724 MOAD: Kd=1.38mM
    7025 3c3d:B (2.5) BS02 FO1 2.7.8.28 GO:0000287 ... Q8PVT6 18252724 MOAD: Kd=1.38mM
    7026 3c3d:C (2.5) BS02 FO1 2.7.8.28 GO:0000287 ... Q8PVT6 18252724 MOAD: Kd=1.38mM
    7027 3c3d:D (2.5) BS02 FO1 2.7.8.28 GO:0000287 ... Q8PVT6 18252724 MOAD: Kd=1.38mM
    7028 3c3u:A (1.8) BS02 C2U 1.1.1.-
    1.1.1.112
    1.1.1.149
    1.1.1.209
    1.1.1.210
    1.1.1.357
    1.1.1.51
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0001523 ... Q04828 18620380 MOAD: Ki=5.9nM
    BindingDB: Ki=5.9nM, IC50=6nM
    7029 3c43:A (2.3) BS01 315 3.4.14.5 GO:0001618 ... P27487 18331795 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=19nM
    7030 3c43:B (2.3) BS01 315 3.4.14.5 GO:0001618 ... P27487 18331795 MOAD: ic50=0.019uM
    BindingDB: IC50=19nM
    7031 3c45:A (2.05) BS01 317 3.4.14.5 GO:0001618 ... P27487 18331795 MOAD: ic50=0.00021uM
    PDBbind: -logKd/Ki=9.68, IC50=0.21nM
    BindingDB: IC50=12nM
    7032 3c45:B (2.05) BS01 317 3.4.14.5 GO:0001618 ... P27487 18331795 MOAD: ic50=0.00021uM
    BindingDB: IC50=12nM
    7033 3c4e:A (1.98) BS01 C4E 2.7.11.1 GO:0004672 ... P11309 18287029 MOAD: ic50~100uM
    PDBbind: -logKd/Ki=4.00, IC50=100uM
    7034 3c4e:B (1.98) BS01 C4E 2.7.11.1 GO:0004672 ... P11309 18287029 MOAD: ic50~100uM
    7035 3c4e:C (1.98) BS01 C4E 2.7.11.1 GO:0004672 ... P11309 18287029 MOAD: ic50~100uM
    7036 3c4e:D (1.98) BS01 C4E 2.7.11.1 GO:0004672 ... P11309 18287029 MOAD: ic50~100uM
    7037 3c4f:A (2.07) BS01 C4F 2.7.10.1 GO:0004672 ... P11362 18287029 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    BindingDB: IC50=1900nM
    7038 3c4f:B (2.07) BS01 C4F 2.7.10.1 GO:0004672 ... P11362 18287029 MOAD: ic50=1.9uM
    BindingDB: IC50=1900nM
    7039 3c4h:A (2.1) BS01 DRL 2.4.2.- GO:0003950 ... Q9Y6F1 19354255 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    7040 3c56:A (2.3) BS02 PH4 4.1.2.13 GO:0004332 ... P56109 18688832 MOAD: Ki=0.013uM
    PDBbind: -logKd/Ki=7.89, Ki=0.013uM
    BindingDB: Ki=13nM
    7041 3c56:B (2.3) BS02 PH4 4.1.2.13 GO:0004332 ... P56109 18688832 MOAD: Ki=0.013uM
    PDBbind: -logKd/Ki=7.89, Ki=0.013uM
    BindingDB: Ki=13nM
    7042 3c6k:A (1.95) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7043 3c6k:B (1.95) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7044 3c6k:C (1.95) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7045 3c6k:D (1.95) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7046 3c6m:A (2.45) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7047 3c6m:B (2.45) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7048 3c6m:C (2.45) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7049 3c6m:D (2.45) BS02 MTA 2.5.1.22 GO:0005829 ... P52788 18367445 MOAD: Ki=0.3uM
    7050 3c72:B (2.3) BS03 CX1 2.5.1.60 GO:0003824 ... Q08603 18399557 MOAD: ic50=22.7uM
    PDBbind: -logKd/Ki=4.64, IC50=22.7uM
    7051 3c79:A (2.48) BS01 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    PDBbind: -logKd/Ki=7.20, Kd=63nM
    BindingDB: Ki=19nM
    7052 3c79:A (2.48) BS02 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    PDBbind: -logKd/Ki=7.20, Kd=63nM
    BindingDB: Ki=19nM
    7053 3c79:B (2.48) BS01 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    BindingDB: Ki=19nM
    7054 3c79:B (2.48) BS02 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    BindingDB: Ki=19nM
    7055 3c79:C (2.48) BS01 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    BindingDB: Ki=19nM
    7056 3c79:C (2.48) BS02 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    BindingDB: Ki=19nM
    7057 3c79:D (2.48) BS01 IM4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=63nM
    BindingDB: Ki=19nM
    7058 3c7i:A (1.7) BS01 TVN ? N/A P62993 17001728 MOAD: Ka=440000M^-1
    7059 3c7p:A (1.7) BS02 POF 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18723489 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    7060 3c7q:A (2.1) BS01 XIN 2.7.10.1 GO:0004672 ... P35968 18559524 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM, Kd=2.9nM, Ki=3.80nM
    7061 3c84:A (1.94) BS01 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    BindingDB: Ki=3.9nM
    7062 3c84:A (1.94) BS02 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    BindingDB: Ki=3.9nM
    7063 3c84:B (1.94) BS01 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    BindingDB: Ki=3.9nM
    7064 3c84:B (1.94) BS02 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    BindingDB: Ki=3.9nM
    7065 3c84:C (1.94) BS01 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    BindingDB: Ki=3.9nM
    7066 3c84:C (1.94) BS02 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    BindingDB: Ki=3.9nM
    7067 3c84:D (1.94) BS01 TH4 ? GO:0004888 ... Q8WSF8 18477694 MOAD: Kd=14nM
    BindingDB: Ki=3.9nM
    7068 3c8e:A (1.5) BS01 GSH 1.11.1.-
    1.8.4.-    		 GO:0004601 ... Q46845 21222452 MOAD: Kd=0.07mM
    PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    7069 3c8e:A (1.5) BS02 GSH 1.11.1.-
    1.8.4.-    		 GO:0004601 ... Q46845 21222452 MOAD: Kd=0.07mM
    PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    7070 3c8e:B (1.5) BS01 GSH 1.11.1.-
    1.8.4.-    		 GO:0004601 ... Q46845 21222452 MOAD: Kd=0.07mM
    PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    7071 3c8e:B (1.5) BS02 GSH 1.11.1.-
    1.8.4.-    		 GO:0004601 ... Q46845 21222452 MOAD: Kd=0.07mM
    PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    7072 3c8z:A (1.6) BS02 5CA 6.3.1.13 GO:0004817 ... A0QZY0 19053270 MOAD: Ki=300nM
    7073 3c8z:B (1.6) BS02 5CA 6.3.1.13 GO:0004817 ... A0QZY0 19053270 MOAD: Ki=300nM
    7074 3caj:A (1.8) BS02 EZL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18359629 MOAD: Ki=8nM
    PDBbind: -logKd/Ki=8.10, Ki=8nM
    BindingDB: Ki=8nM, IC50=3nM, Kd=0.71nM
    7075 3caq:A (2.2) BS01 NDP 1.3.1.3 GO:0004032 ... P51857 19075558 MOAD: Kd=528nM
    7076 3caq:B (2.2) BS01 NDP 1.3.1.3 GO:0004032 ... P51857 19075558 MOAD: Kd=528nM
    7077 3cb0:A (1.6) BS01 FMN 1.14.14.9 GO:0000166 ... Q8YHT7 18263579 MOAD: Kd=648nM
    7078 3cb0:B (1.6) BS01 FMN 1.14.14.9 GO:0000166 ... Q8YHT7 18263579 MOAD: Kd=648nM
    7079 3cbs:A (2.0) BS01 R12 ? GO:0001972 ... P29373 10531482 MOAD: ic50=58nM
    PDBbind: -logKd/Ki=7.24, IC50=58nM
    7080 3ccb:A (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    BindingDB: IC50=30000nM
    7081 3ccb:B (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    7082 3ccb:C (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    7083 3ccb:D (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    7084 3ccn:A (1.9) BS01 LKG 2.7.10.1 GO:0004672 ... P08581 18426196 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    BindingDB: IC50=120nM
    7085 3cct:B (2.12) BS01 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    PDBbind: -logKd/Ki=7.56, Kd=27.4nM
    7086 3cct:B (2.12) BS02 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    PDBbind: -logKd/Ki=7.56, Kd=27.4nM
    7087 3cct:C (2.12) BS01 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    7088 3cct:C (2.12) BS02 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    7089 3cct:D (2.12) BS01 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    7090 3cct:D (2.12) BS02 3HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=27.4nM
    7091 3ccw:B (2.1) BS01 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    PDBbind: -logKd/Ki=7.87, Kd=13.5nM
    7092 3ccw:B (2.1) BS02 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    PDBbind: -logKd/Ki=7.87, Kd=13.5nM
    7093 3ccw:C (2.1) BS01 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    7094 3ccw:C (2.1) BS02 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    7095 3ccw:D (2.1) BS01 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    7096 3ccw:D (2.1) BS02 4HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=13.5nM
    7097 3ccz:A (1.7) BS01 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    PDBbind: -logKd/Ki=7.29, Kd=51.7nM
    7098 3ccz:A (1.7) BS02 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    PDBbind: -logKd/Ki=7.29, Kd=51.7nM
    7099 3ccz:B (1.7) BS01 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    PDBbind: -logKd/Ki=7.29, Kd=51.7nM
    7100 3ccz:B (1.7) BS02 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    PDBbind: -logKd/Ki=7.29, Kd=51.7nM
    7101 3ccz:C (1.7) BS01 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    7102 3ccz:C (1.7) BS02 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    7103 3ccz:D (1.7) BS01 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    7104 3ccz:D (1.7) BS02 5HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=51.7nM
    7105 3cd0:B (2.4) BS01 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    PDBbind: -logKd/Ki=7.57, Kd=26.9nM
    7106 3cd0:B (2.4) BS02 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    PDBbind: -logKd/Ki=7.57, Kd=26.9nM
    7107 3cd0:C (2.4) BS01 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    7108 3cd0:C (2.4) BS02 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    7109 3cd0:D (2.4) BS01 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    7110 3cd0:D (2.4) BS02 6HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.9nM
    7111 3cd5:A (2.39) BS01 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    PDBbind: -logKd/Ki=7.90, Kd=12.7nM
    7112 3cd5:A (2.39) BS02 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    PDBbind: -logKd/Ki=7.90, Kd=12.7nM
    7113 3cd5:B (2.39) BS01 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    PDBbind: -logKd/Ki=7.90, Kd=12.7nM
    7114 3cd5:B (2.39) BS02 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    PDBbind: -logKd/Ki=7.90, Kd=12.7nM
    7115 3cd5:D (2.39) BS01 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    7116 3cd5:D (2.39) BS02 7HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=12.7nM
    7117 3cd7:A (2.05) BS01 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    PDBbind: -logKd/Ki=7.84, Kd=14.3nM
    BindingDB: IC50=1.8nM
    7118 3cd7:A (2.05) BS02 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    PDBbind: -logKd/Ki=7.84, Kd=14.3nM
    BindingDB: IC50=1.8nM
    7119 3cd7:C (2.05) BS01 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    BindingDB: IC50=1.8nM
    7120 3cd7:C (2.05) BS02 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    BindingDB: IC50=1.8nM
    7121 3cd7:D (2.05) BS01 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    BindingDB: IC50=1.8nM
    7122 3cd7:D (2.05) BS02 882 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=14.3nM
    BindingDB: IC50=1.8nM
    7123 3cd8:A (2.0) BS01 L5G 2.7.10.1 GO:0004672 ... P08581 18426196 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=9nM
    7124 3cda:A (2.07) BS01 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    PDBbind: -logKd/Ki=7.58, Kd=26.3nM
    7125 3cda:A (2.07) BS02 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    PDBbind: -logKd/Ki=7.58, Kd=26.3nM
    7126 3cda:B (2.07) BS01 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    PDBbind: -logKd/Ki=7.58, Kd=26.3nM
    7127 3cda:B (2.07) BS02 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    PDBbind: -logKd/Ki=7.58, Kd=26.3nM
    7128 3cda:C (2.07) BS01 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    7129 3cda:C (2.07) BS02 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    7130 3cda:D (2.07) BS01 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    7131 3cda:D (2.07) BS02 8HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=26.3nM
    7132 3cdb:A (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    PDBbind: -logKd/Ki=7.02, Kd=95.7nM
    7133 3cdb:A (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    PDBbind: -logKd/Ki=7.02, Kd=95.7nM
    7134 3cdb:C (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    7135 3cdb:C (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    7136 3cdb:D (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    7137 3cdb:D (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    7138 3cde:A (2.1) BS01 N3H 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18457949 MOAD: ic50<0.01uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=<10nM, EC50=5nM
    7139 3cde:B (2.1) BS01 N3H 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18457949 MOAD: ic50<0.01uM
    BindingDB: IC50=<10nM, EC50=5nM
    7140 3ce3:A (2.4) BS01 1FN 2.7.10.1 GO:0004672 ... P08581 18690676 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=1.8nM
    7141 3ce6:A (1.6) BS01 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    7142 3ce6:B (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    7143 3ce6:C (1.6) BS01 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    7144 3ce6:D (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    7145 3cem:A (2.47) BS03 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    7146 3cem:A (2.47) BS04 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    7147 3cem:B (2.47) BS01 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    7148 3cem:B (2.47) BS04 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    7149 3cen:A (1.6) BS01 FXA 3.4.21.6 GO:0004252 ... P00742 18424044 MOAD: Ki=5.5nM
    PDBbind: -logKd/Ki=8.26, Ki=5.5nM
    BindingDB: Ki=5.5nM
    7150 3cf8:A (2.4) BS01 QUE 4.2.1.59 GO:0005737 ... Q5G940 18780820 MOAD: Ki=12.7uM
    PDBbind: -logKd/Ki=4.90, Ki=12.7uM
    7151 3cf8:C (2.4) BS01 QUE 4.2.1.59 GO:0005737 ... Q5G940 18780820 MOAD: Ki=12.7uM
    7152 3cfn:A (1.87) BS01 2AN ? GO:0005179 ... P02766 19954984 MOAD: Kd=4.3uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    BindingDB: Kd=1100nM
    7153 3cfn:B (1.87) BS01 2AN ? GO:0005179 ... P02766 19954984 MOAD: Kd=4.3uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    BindingDB: Kd=1100nM
    7154 3cft:A (1.87) BS01 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    7155 3cft:B (1.87) BS01 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    7156 3cft:B (1.87) BS02 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    7157 3ch6:A (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    7158 3ch6:B (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    7159 3ch6:D (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    7160 3ch6:E (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    7161 3ch9:A (2.2) BS01 XRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=500uM
    PDBbind: -logKd/Ki=3.30, IC50=500uM
    7162 3ch9:B (2.2) BS01 XRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=500uM
    7163 3chc:A (1.9) BS01 ZRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=81uM
    PDBbind: -logKd/Ki=4.09, IC50=81uM
    7164 3chc:B (1.9) BS01 ZRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=81uM
    7165 3chd:A (2.0) BS01 WRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=1.2e+4nM
    7166 3chd:B (2.0) BS01 WRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=12uM
    BindingDB: IC50=1.2e+4nM
    7167 3cho:A (1.8) BS02 4BG 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=280nM
    PDBbind: -logKd/Ki=6.55, IC50=280nM
    BindingDB: IC50=300nM
    7168 3chp:A (2.1) BS02 4BO 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=5400nM
    PDBbind: -logKd/Ki=5.27, IC50=5400nM
    BindingDB: IC50=5400nM
    7169 3chq:A (2.09) BS02 4BQ 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    7170 3chr:A (2.2) BS02 4BS 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=61nM
    PDBbind: -logKd/Ki=7.21, IC50=61nM
    BindingDB: IC50=61nM
    7171 3cib:A (1.72) BS01 314 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=522nM
    7172 3cib:B (1.72) BS01 314 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=14nM
    BindingDB: IC50=522nM
    7173 3cic:A (1.75) BS01 316 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=300nM, Ki=3nM
    7174 3cic:B (1.75) BS01 316 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=3nM
    BindingDB: IC50=300nM, Ki=3nM
    7175 3cid:A (1.8) BS01 318 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    7176 3cid:B (1.8) BS01 318 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=5nM
    BindingDB: IC50=5nM
    7177 3cj2:A (1.75) BS01 SX3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    7178 3cj2:B (1.75) BS01 SX3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=14uM
    7179 3cj3:A (1.87) BS01 SX4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: ic50=57uM
    PDBbind: -logKd/Ki=4.24, IC50=57uM
    7180 3cj3:B (1.87) BS01 SX4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: ic50=57uM
    7181 3cj4:A (2.07) BS01 SX5 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.31uM
    PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    7182 3cj4:B (2.07) BS01 SX5 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.31uM
    7183 3cj5:A (1.92) BS01 SX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.46uM
    PDBbind: -logKd/Ki=6.34, Kd=0.46uM
    7184 3cj5:B (1.92) BS01 SX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.46uM
    7185 3cjf:A (2.15) BS01 SAV 2.7.10.1 GO:0004672 ... P35968 18620382 MOAD: ic50=6.3nM
    PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    BindingDB: IC50=6.3nM
    7186 3cjo:A (2.28) BS02 K30 ? GO:0003777 ... P52732 18578472 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    7187 3cjo:B (2.28) BS02 K30 ? GO:0003777 ... P52732 18578472 MOAD: ic50=2.2nM
    7188 3ckp:A (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    PDBbind: -logKd/Ki=6.35, Ki=0.449uM
    7189 3ckp:B (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    7190 3ckp:C (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    7191 3ckt:A (1.65) BS01 YDP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21762812 MOAD: Ki=0.48uM
    PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    7192 3ckz:A (1.9) BS02 ZMR 3.2.1.18 GO:0004308 ... Q6DPL2 18480754 MOAD: Ki=0.19nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    7193 3cl0:A (2.2) BS01 G39 3.2.1.18 GO:0004308 ... Q6DPL2 18480754 MOAD: Ki=84.8nM
    PDBbind: -logKd/Ki=7.07, Ki=84.8nM
    7194 3cla:A (1.75) BS02 CLM 2.3.1.28 GO:0008811 ... P00484 2187098 MOAD: Kd=13uM
    7195 3cm2:A (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    7196 3cm2:A (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    7197 3cm2:B (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    7198 3cm2:C (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    7199 3cm2:C (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    7200 3cm2:D (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    PDBbind: -logKd/Ki=6.47, Ki=340nM
    BindingDB: IC50=110nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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