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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5201 2q6c:D (2.0) BS01 HR1 1.1.1.34 GO:0004420 ... P04035 17574411 MOAD: ic50=16.7nM
    5202 2q6c:D (2.0) BS02 HR1 1.1.1.34 GO:0004420 ... P04035 17574411 MOAD: ic50=16.7nM
    5203 2q6h:A (1.85) BS04 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=250uM
    PDBbind: -logKd/Ki=3.60, IC50=250uM
    5204 2q6h:A (1.85) BS05 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=250uM
    PDBbind: -logKd/Ki=3.60, IC50=250uM
    5205 2q6m:A (1.25) BS01 P34 2.4.2.36 GO:0047286 ... Q5EK40 18276581 MOAD: Kd=0.51uM
    5206 2q6m:A (1.25) BS02 P34 2.4.2.36 GO:0047286 ... Q5EK40 18276581 MOAD: Kd=0.51uM
    5207 2q70:A (1.95) BS01 DC8 ? N/A P03372 17614275 MOAD: Ki=8.3nM
    PDBbind: -logKd/Ki=8.08, Ki=8.3nM
    BindingDB: Ki=8.3nM
    5208 2q70:B (1.95) BS01 DC8 ? N/A P03372 17614275 MOAD: Ki=8.3nM
    BindingDB: Ki=8.3nM
    5209 2q72:A (1.7) BS04 IXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=2090uM
    PDBbind: -logKd/Ki=2.68, IC50=2.09mM
    5210 2q72:A (1.7) BS05 IXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=2090uM
    PDBbind: -logKd/Ki=2.68, IC50=2.09mM
    5211 2q7q:D (1.6) BS01 C2B 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd<5uM
    5212 2q7q:H (1.6) BS01 C2B 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd<5uM
    5213 2q88:A (1.9) BS01 4CS ? GO:0033294 ... Q92WC8 17996893 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    5214 2q89:A (2.3) BS01 6CS ? GO:0033294 ... Q92WC8 17996893 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    5215 2q8g:A (1.9) BS01 AZX 2.7.11.2 GO:0004672 ... Q15118 17683942 MOAD: ic50=0.087uM
    PDBbind: -logKd/Ki=7.06, IC50=87nM
    BindingDB: IC50=41nM
    5216 2q8h:A (2.0) BS01 TF4 2.7.11.2 GO:0004672 ... Q15118 17683942 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Kd=1mM
    BindingDB: IC50=5100000nM
    5217 2q8m:A (2.05) BS01 BG6 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki~700uM
    5218 2q8m:A (2.05) BS02 FBP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: ic50=6uM
    5219 2q8m:A (2.05) BS05 AMP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki=94uM
    PDBbind: -logKd/Ki=4.03, Ki=94uM
    5220 2q8m:B (2.05) BS01 FBP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: ic50=6uM
    5221 2q8m:B (2.05) BS04 AMP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki=94uM
    5222 2q8s:A (2.3) BS01 L92 ? GO:0003677 ... P37231 18394907 MOAD: ic50=0.185uM
    PDBbind: -logKd/Ki=6.73, IC50=0.185uM
    BindingDB: EC50=140nM, IC50=185nM
    5223 2q8z:A (1.8) BS01 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    5224 2q8z:A (1.8) BS02 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    5225 2q8z:B (1.8) BS01 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    5226 2q8z:B (1.8) BS02 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    5227 2q92:A (1.9) BS03 B23 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1080nM
    5228 2q93:A (1.6) BS03 B21 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    BindingDB: IC50=>200000nM
    5229 2q94:A (1.63) BS03 A04 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=0.37uM
    PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    BindingDB: IC50=197000nM
    5230 2q95:A (1.7) BS03 A05 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.6uM
    PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=48600nM
    5231 2q96:A (1.6) BS03 A18 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=158000nM
    5232 2q9f:A (1.9) BS02 C3S 1.14.14.25 GO:0004497 ... Q9Y6A2 18621681 MOAD: Kd=7nM
    5233 2qbp:A (2.5) BS01 527 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, Ki=0.004uM
    BindingDB: Ki=4nM
    5234 2qbq:A (2.1) BS01 4B3 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.036uM
    PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    BindingDB: Ki=36nM
    5235 2qbr:A (2.3) BS01 910 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.47uM
    PDBbind: -logKd/Ki=6.33, Ki=0.47uM
    BindingDB: Ki=470nM
    5236 2qbs:A (2.1) BS01 024 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.21uM
    PDBbind: -logKd/Ki=6.68, Ki=0.21uM
    BindingDB: Ki=210nM
    5237 2qbu:B (2.1) BS01 SAH ? GO:0008168 ... O27402 17567575 MOAD: Kd=0.645uM
    PDBbind: -logKd/Ki=6.19, Kd=0.645uM
    5238 2qc6:A (1.85) BS01 G12 2.7.11.1 GO:0004672 ... P28523 18251491 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    5239 2qci:B (1.2) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=4.6nM
    PDBbind: -logKd/Ki=8.34, Ki=4.6nM
    5240 2qd6:B (1.28) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=2.1nM
    PDBbind: -logKd/Ki=8.68, Ki=2.1nM
    5241 2qd7:B (1.11) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=0.8nM
    PDBbind: -logKd/Ki=9.10, Ki=0.80nM
    5242 2qd8:B (1.35) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=0.85nM
    PDBbind: -logKd/Ki=9.07, Ki=0.85nM
    5243 2qd9:A (1.7) BS01 LGF 2.7.11.24 GO:0000077 ... Q16539 17664068 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    5244 2qds:A (1.66) BS02 MCO 3.5.2.6 GO:0008270 ... P26918 18563261 MOAD: Ki=72uM
    5245 2qdt:A (2.0) BS03 I38 3.5.2.6 GO:0008270 ... P52700 18563261 MOAD: Ki=6.5uM
    PDBbind: -logKd/Ki=5.19, Ki=6.5uM
    5246 2qe4:A (2.4) BS01 JJ3 ? N/A P03372 17662603 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11.0nM
    BindingDB: Ki=11nM
    5247 2qe4:B (2.4) BS01 JJ3 ? N/A P03372 17662603 MOAD: Ki=11nM
    BindingDB: Ki=11nM
    5248 2qeh:A (2.102) BS01 SRO ? GO:0005549 ... Q7PNF2 17928288 MOAD: Kd=2.4nM
    5249 2qei:A (1.85) BS04 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50~5uM
    5250 2qei:A (1.85) BS05 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50~5uM
    5251 2qfo:A (1.68) BS01 A13 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Ki=1.8e+4nM, Kd=2.0e+4nM
    5252 2qfo:A (1.68) BS02 A51 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Kd=150uM
    5253 2qfq:A (1.5) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: ic50=66uM
    BindingDB: Kd=7000nM
    5254 2qfs:A (1.55) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=5.5uM
    BindingDB: Kd=7000nM
    5255 2qft:A (1.55) BS02 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=5.5uM
    BindingDB: Kd=7000nM
    5256 2qfu:A (1.6) BS02 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=66uM
    BindingDB: Kd=7000nM
    5257 2qg0:A (1.85) BS01 A94 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    5258 2qg0:B (1.85) BS01 A94 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    5259 2qg2:A (1.8) BS01 A91 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    5260 2qhm:A (2.0) BS01 7CS 2.7.11.1 GO:0000077 ... O14757 17804227 MOAD: ic50=660nM
    PDBbind: -logKd/Ki=6.18, Kd=660nM
    5261 2qhn:A (1.7) BS01 582 2.7.11.1 GO:0000077 ... O14757 17804227 MOAD: ic50=980nM
    PDBbind: -logKd/Ki=6.01, IC50=980nM
    5262 2qhy:A (1.85) BS01 MZ1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    5263 2qhz:A (1.85) BS01 MZ2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=53nM
    PDBbind: -logKd/Ki=7.28, Ki=53nM
    5264 2qi0:B (2.1) BS01 MZ3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    5265 2qi1:A (2.0) BS01 MZ4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    5266 2qi3:B (1.95) BS01 MZ5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    5267 2qi4:A (1.8) BS01 MZ6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.036nM
    PDBbind: -logKd/Ki=10.44, Ki=0.036nM
    5268 2qi5:B (1.85) BS01 MZ7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.014nM
    PDBbind: -logKd/Ki=10.85, Ki=0.014nM
    5269 2qi6:A (1.85) BS01 MZ8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.027nM
    PDBbind: -logKd/Ki=10.57, Ki=0.027nM
    5270 2qi7:B (1.85) BS01 MZ9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.062nM
    PDBbind: -logKd/Ki=10.21, Ki=0.062nM
    5271 2qio:A (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    5272 2qio:B (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    5273 2qio:C (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    5274 2qio:D (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    5275 2qiq:A (1.9) BS01 CYV 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 17855091 MOAD: ic50=80uM
    PDBbind: -logKd/Ki=4.10, IC50=80uM
    BindingDB: IC50=80000nM
    5276 2qjr:A (2.2) BS01 PZF 3.4.14.5 GO:0001618 ... P27487 17822893 MOAD: ic50=6.4nM
    BindingDB: IC50=6.4nM
    5277 2qjr:B (2.2) BS01 PZF 3.4.14.5 GO:0001618 ... P27487 17822893 MOAD: ic50=6.4nM
    BindingDB: IC50=6.4nM
    5278 2qjy:A (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5279 2qjy:D (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5280 2qjy:G (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5281 2qjy:J (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5282 2qjy:M (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5283 2qjy:P (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    5284 2qk5:A (2.2) BS01 CS5 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=20nM
    5285 2qk5:B (2.2) BS01 CS5 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    BindingDB: IC50=20nM
    5286 2qk8:A (2.4) BS01 MTX 1.5.1.3 GO:0000166 ... Q81R22 17696333 MOAD: ic50~20nM
    PDBbind: -logKd/Ki=7.91, IC50=12.2nM
    BindingDB: IC50=15nM
    5287 2qkn:A (2.15) BS02 245 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=18uM
    5288 2qkn:A (2.15) BS03 245 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=18uM
    5289 2qm9:A (2.31) BS01 TDZ ? GO:0005324 ... P04117 17761196 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    5290 2qm9:B (2.31) BS01 TDZ ? GO:0005324 ... P04117 17761196 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    5291 2qmd:A (1.65) BS01 CS7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=150nM
    5292 2qmd:B (1.65) BS01 CS7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=5nM
    BindingDB: IC50=150nM
    5293 2qmf:A (1.75) BS01 CS9 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=165nM
    5294 2qmf:B (1.75) BS01 CS9 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=3nM
    BindingDB: IC50=165nM
    5295 2qmg:A (1.89) BS01 SC6 3.4.23.46 GO:0004190 ... P56817 17980584 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    5296 2qmg:B (1.89) BS01 SC6 3.4.23.46 GO:0004190 ... P56817 17980584 MOAD: Ki=0.7nM
    5297 2qnn:B (1.48) BS01 QN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.07uM
    PDBbind: -logKd/Ki=7.15, Ki=0.07uM
    5298 2qnp:A (1.41) BS01 QN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.39uM
    PDBbind: -logKd/Ki=6.41, Ki=0.39uM
    5299 2qnq:A (2.3) BS01 QN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.77uM
    PDBbind: -logKd/Ki=6.11, Ki=0.77uM
    5300 2qo8:A (1.4) BS02 3CC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=3.4nM
    PDBbind: -logKd/Ki=8.47, Ki=3.4nM
    BindingDB: Ki=0.9nM
    5301 2qoa:A (1.6) BS02 MAJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=52nM
    PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=52nM
    5302 2qoa:A (1.6) BS03 MAJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=52nM
    PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=52nM
    5303 2qoe:A (2.3) BS01 448 3.4.14.5 GO:0001618 ... P27487 17827003 MOAD: ic50=25nM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: IC50=25nM
    5304 2qoe:B (2.3) BS01 448 3.4.14.5 GO:0001618 ... P27487 17827003 MOAD: ic50=25nM
    BindingDB: IC50=25nM
    5305 2qp6:A (1.45) BS02 MB1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18481843 MOAD: Ki=208nM
    PDBbind: -logKd/Ki=6.68, Ki=208nM
    5306 2qp8:A (1.5) BS01 SC7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=106nM
    5307 2qp8:B (1.5) BS01 SC7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    BindingDB: IC50=106nM
    5308 2qpl:A (2.1) BS01 BTY 2.4.2.1 GO:0003824 ... P55859 17927987 MOAD: ic50=18.9uM
    5309 2qpm:A (1.85) BS02 246 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=42uM
    5310 2qrg:A (1.85) BS01 M07 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=6.6uM
    PDBbind: -logKd/Ki=5.18, Ki=6.6uM
    BindingDB: Ki=6600nM
    5311 2qrh:A (1.83) BS01 M08 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=19.6uM
    PDBbind: -logKd/Ki=4.71, Ki=19.6uM
    BindingDB: Ki=19600nM
    5312 2qrk:A (1.75) BS01 AMP 1.5.1.7 GO:0003729 ... P38998 17939687 MOAD: Ki=55uM
    PDBbind: -logKd/Ki=4.26, Ki=55uM
    5313 2qrm:A (1.9) BS01 M09 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=92.5uM
    PDBbind: -logKd/Ki=4.03, Ki=92.5uM
    5314 2qrp:A (1.86) BS01 S06 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=0.63uM
    PDBbind: -logKd/Ki=6.20, Ki=0.63uM
    5315 2qrq:A (1.8) BS01 S13 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=7.9uM
    PDBbind: -logKd/Ki=5.10, Ki=7.9uM
    5316 2qry:A (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    BindingDB: Kd=2.3nM
    5317 2qry:B (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    5318 2qry:C (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    5319 2qry:D (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    5320 2qs1:A (1.8) BS01 UB1 ? GO:0015276 ... P22756 20558186 MOAD: Kd=33nM
    BindingDB: Kd=10nM
    5321 2qs1:B (1.8) BS01 UB1 ? GO:0015276 ... P22756 20558186 MOAD: Kd=33nM
    BindingDB: Kd=10nM
    5322 2qs2:A (1.8) BS01 UBF ? GO:0015276 ... P22756 20558186 MOAD: Kd=186nM
    BindingDB: Kd=25nM
    5323 2qs2:B (1.8) BS01 UBF ? GO:0015276 ... P22756 20558186 MOAD: Kd=186nM
    BindingDB: Kd=25nM
    5324 2qs3:A (1.76) BS01 UBE ? GO:0015276 ... P22756 18789344 MOAD: Kd=1.4nM
    BindingDB: Kd=12nM
    5325 2qs3:B (1.76) BS01 UBE ? GO:0015276 ... P22756 18789344 MOAD: Kd=1.4nM
    BindingDB: Kd=12nM
    5326 2qs4:A (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    5327 2qs4:B (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    5328 2qs4:C (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    5329 2qs4:D (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    5330 2qt9:A (2.1) BS01 524 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=0.0023uM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    BindingDB: IC50=2.3nM
    5331 2qt9:B (2.1) BS01 524 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=0.0023uM
    BindingDB: IC50=2.3nM
    5332 2qtb:A (2.25) BS01 474 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=4.8nM
    PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    BindingDB: IC50=4.8nM
    5333 2qtb:B (2.25) BS01 474 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=4.8nM
    BindingDB: IC50=4.8nM
    5334 2qtg:A (1.84) BS01 MTH 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=8.3uM
    PDBbind: -logKd/Ki=5.08, Ki=8.3uM
    5335 2qtg:B (1.84) BS01 MTH 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=8.3uM
    PDBbind: -logKd/Ki=5.08, Ki=8.3uM
    5336 2qtr:A (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    5337 2qtr:B (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    5338 2qtr:C (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    5339 2qtt:B (1.93) BS01 FMC 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=48uM
    PDBbind: -logKd/Ki=4.32, Ki=48uM
    5340 2qtz:A (1.9) BS02 NAP 1.16.1.8 GO:0016491 ... Q9UBK8 17892308 MOAD: Kd=35.1uM
    5341 2qu3:A (2.0) BS01 462 3.4.23.46 GO:0004190 ... P56817 17761418 MOAD: ic50=0.59uM
    PDBbind: -logKd/Ki=6.23, IC50=0.59uM
    BindingDB: IC50=590nM
    5342 2qu6:A (2.1) BS01 857 2.7.10.1 GO:0004672 ... P35968 17696416 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: IC50=4.6nM, Ki=2.8nM
    5343 2qu6:B (2.1) BS01 857 2.7.10.1 GO:0004672 ... P35968 17696416 MOAD: Ki=3nM
    BindingDB: IC50=4.6nM, Ki=2.8nM
    5344 2qvd:A (1.93) BS01 BER 3.1.1.4 GO:0004623 ... P59071 21420512 MOAD: Kd=0.000000064M
    5345 2qvu:A (1.5) BS01 FDP 3.1.3.11 GO:0005737 ... P00636 17933867 MOAD: Kd=0.36uM
    5346 2qvu:B (1.5) BS01 FDP 3.1.3.11 GO:0005737 ... P00636 17933867 MOAD: Kd=0.36uM
    5347 2qw1:A (1.7) BS01 3MG ? GO:0005509 ... P0AEE5 19348466 MOAD: Ki=125uM
    PDBbind: -logKd/Ki=3.90, Ki=125uM
    5348 2qwb:A (2.0) BS01 SIA 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=1820uM
    PDBbind: -logKd/Ki=2.74, Ki=1820uM
    5349 2qwb:A (2.0) BS02 SIA 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=1820uM
    PDBbind: -logKd/Ki=2.74, Ki=1820uM
    5350 2qwc:A (1.6) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=280uM
    PDBbind: -logKd/Ki=3.55, Ki=280uM
    BindingDB: IC50=13000nM
    5351 2qwd:A (2.0) BS02 4AM 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    5352 2qwe:A (2.0) BS02 ZMR 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=0.033uM
    5353 2qwf:A (1.9) BS02 G20 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=2.16uM
    PDBbind: -logKd/Ki=5.67, Ki=2.160uM
    5354 2qwg:A (1.8) BS02 G28 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=230uM
    PDBbind: -logKd/Ki=3.64, IC50=230uM
    5355 2qwh:A (1.8) BS01 G39 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=13uM
    5356 2qwi:A (2.0) BS02 G20 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=2.16uM
    5357 2qwj:A (2.0) BS02 G28 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=0.23uM
    5358 2qwk:A (1.8) BS01 G39 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=0.002uM
    5359 2qwx:A (1.5) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5360 2qwx:A (1.5) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5361 2qwx:B (1.5) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5362 2qwx:B (1.5) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5363 2qx0:A (1.8) BS04 PH2 2.7.6.3 GO:0003848 ... A0A5P8YCA3 18007032 MOAD: Kd=0.78uM
    PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    5364 2qx0:B (1.8) BS04 PH2 2.7.6.3 GO:0003848 ... A0A5P8YCA3 18007032 MOAD: Kd=0.78uM
    PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    5365 2qx4:A (1.65) BS02 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5366 2qx4:B (1.65) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5367 2qx4:B (1.65) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5368 2qx6:A (1.75) BS02 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5369 2qx6:A (1.75) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5370 2qx6:B (1.75) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5371 2qx6:B (1.75) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    5372 2qx8:A (1.6) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    5373 2qx8:B (1.6) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    5374 2qx9:A (2.31) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    5375 2qyk:A (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    5376 2qyk:B (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    5377 2qyl:A (1.95) BS03 NPV 3.1.4.53 GO:0004114 ... Q07343 17727341 MOAD: ic50=0.65uM
    PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    BindingDB: IC50=650nM
    5378 2qyn:A (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    BindingDB: IC50=1nM
    5379 2qyn:B (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    BindingDB: IC50=1nM
    5380 2qzk:A (1.8) BS01 I21 3.4.23.46 GO:0004190 ... P56817 17827011 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    5381 2qzl:A (1.8) BS01 IXS 3.4.23.46 GO:0004190 ... P56817 16690314 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    5382 2qzr:A (1.95) BS02 S79 2.4.2.29 GO:0002099 ... P28720 17902085 MOAD: Ki=55nM
    PDBbind: -logKd/Ki=7.26, Ki=55nM
    5383 2qzz:A (1.6) BS02 EMF 1.1.1.318 GO:0000166 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    5384 2qzz:B (1.6) BS02 EMF 1.1.1.318 GO:0000166 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    5385 2r0u:A (1.9) BS01 M54 2.7.11.1 GO:0000077 ... O14757 17900896 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1.0nM
    BindingDB: IC50=1nM
    5386 2r14:A (1.4) BS02 TXD ? GO:0000166 ... Q51990 17939663 MOAD: Kd=0.63mM
    5387 2r2l:B (2.23) BS03 PB9 2.5.1.58 GO:0003824 ... Q02293 17606674 MOAD: ic50=0.58nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    5388 2r2m:B (2.1) BS03 I50 3.4.21.5 GO:0004252 ... P00734 17889527 MOAD: Ki=47.1nM
    PDBbind: -logKd/Ki=7.33, Ki=47.1nM
    5389 2r2w:U (2.01) BS01 4PG 3.4.21.73 GO:0004252 ... P00749 17905583 MOAD: Ki=34uM
    PDBbind: -logKd/Ki=4.47, Ki=34uM
    5390 2r38:B (1.81) BS01 G4G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 MOAD: Ki=0.036uM
    PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    5391 2r3f:A (1.5) BS01 SC8 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=500nM
    PDBbind: -logKd/Ki=6.30, IC50=500nM
    5392 2r3g:A (1.55) BS01 SC9 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=800nM
    PDBbind: -logKd/Ki=6.10, IC50=800nM
    5393 2r3h:A (1.5) BS01 SCE 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=20000nM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    5394 2r3i:A (1.28) BS01 SCF 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=1000nM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    5395 2r3j:A (1.65) BS01 SCJ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    5396 2r3k:A (1.7) BS01 SCQ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    5397 2r3l:A (1.65) BS01 SCW 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    5398 2r3m:A (1.7) BS01 SCX 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    5399 2r3n:A (1.63) BS01 SCZ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    5400 2r3o:A (1.8) BS01 2SC 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218