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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2801 1wc3:A (1.9) BS02 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2802 1wc3:B (1.9) BS01 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2803 1wc3:B (1.9) BS02 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2804 1wc5:A (2.3) BS01 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2805 1wc5:A (2.3) BS03 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2806 1wc5:B (2.3) BS01 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2807 1wc5:B (2.3) BS03 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2808 1wc5:C (2.3) BS01 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2809 1wc5:C (2.3) BS02 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2810 1wc5:D (2.3) BS01 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2811 1wc5:D (2.3) BS02 APC 2.7.13.3 GO:0009190 ... O32393 15619637 MOAD: Ki=0.3mM
    2812 1wcb:A (2.5) BS01 PE1 N/A N/A N/A 16790434 MOAD: Kd=26nM
    2813 1wcb:L (2.5) BS01 PE1 N/A N/A N/A 16790434 MOAD: Kd=26nM
    2814 1wcc:A (2.2) BS01 CIG 2.7.11.22 GO:0000082 ... P24941 15658854 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    BindingDB: IC50=350000nM
    2815 1wcq:A (2.1) BS01 DAN 3.2.1.18 GO:0004308 ... Q02834 16206228 MOAD: Ki=0.55uM
    PDBbind: -logKd/Ki=6.26, Ki=0.55uM
    2816 1wcq:B (2.1) BS01 DAN 3.2.1.18 GO:0004308 ... Q02834 16206228 MOAD: Ki=0.55uM
    2817 1wcq:C (2.1) BS01 DAN 3.2.1.18 GO:0004308 ... Q02834 16206228 MOAD: Ki=0.55uM
    2818 1wdn:A (1.94) BS01 GLN ? GO:0006865 ... P0AEQ3 9571045 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    2819 1wei:A (1.45) BS01 ADE 3.2.2.31 GO:0003677 ... P17802 15326180 MOAD: Kd~1nM
    2820 1wht:A (2.0) BS01 BZS 3.4.16.6 GO:0004185 ... P08819 7727364 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    2821 1wkm:A (2.3) BS03 MET 3.4.11.18 GO:0004177 ... P56218 15628852 MOAD: Ki=150mM
    PDBbind: -logKd/Ki=0.82, Ki=150mM
    2822 1wkm:B (2.3) BS03 MET 3.4.11.18 GO:0004177 ... P56218 15628852 MOAD: Ki=150mM
    2823 1wm1:A (2.1) BS01 PTB 3.4.11.5 GO:0004177 ... O32449 12893291 MOAD: Ki=0.5uM
    PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    BindingDB: Ki=500nM
    2824 1wma:A (1.24) BS01 AB3 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71    		 GO:0004090 ... P16152 15799708 MOAD: ic50=788nM
    2825 1wma:A (1.24) BS02 AB3 1.1.1.184
    1.1.1.189
    1.1.1.196
    1.1.1.197
    1.1.1.71    		 GO:0004090 ... P16152 15799708 MOAD: ic50=788nM
    2826 1wqv:H (2.5) BS02 PSM 3.4.21.21 GO:0004252 ... P08709 15504346 MOAD: ic50=130nM
    PDBbind: -logKd/Ki=6.89, IC50=130nM
    2827 1ws1:A (2.0) BS01 BB2 3.5.1.88 GO:0006412 ... Q819U0 16049914 MOAD: Ki=0.28nM
    PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    2828 1ws4:A (1.9) BS04 GYP ? GO:0005575 ... P18670 15733927 MOAD: Kd=1mM
    PDBbind: -logKd/Ki=3.00, Kd=1.00mM
    2829 1ws4:C (1.9) BS04 GYP ? GO:0005575 ... P18670 15733927 MOAD: Kd=1mM
    2830 1ws4:G (1.9) BS04 GYP ? GO:0005575 ... P18670 15733927 MOAD: Kd=1mM
    2831 1ws5:A (1.9) BS04 MMA ? GO:0005575 ... P18670 15733927 MOAD: Ka=0.00108M^-1
    2832 1ws5:C (1.9) BS04 MMA ? GO:0005575 ... P18670 15733927 MOAD: Ka=0.00108M^-1
    2833 1ws5:E (1.9) BS04 MMA ? GO:0005575 ... P18670 15733927 MOAD: Ka=0.00108M^-1
    2834 1ws5:G (1.9) BS04 MMA ? GO:0005575 ... P18670 15733927 MOAD: Ka=0.00108M^-1
    2835 1wtg:H (2.2) BS02 3BP 3.4.21.21 GO:0004252 ... P08709 15607748 MOAD: ic50=93nM
    PDBbind: -logKd/Ki=7.03, IC50=93nM
    BindingDB: IC50=93nM
    2836 1wu1:A (2.3) BS03 D91 3.4.21.6 GO:0004252 ... P00742 15911309 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    2837 1wun:H (2.4) BS02 P5B 3.4.21.21 GO:0004252 ... P08709 15629154 MOAD: ic50=62nM
    PDBbind: -logKd/Ki=7.21, IC50=62nM
    2838 1wut:A (2.26) BS02 BN2 2.4.1.1 GO:0000166 ... P00489 15987904 MOAD: ic50=1.9uM
    2839 1wuy:A (2.26) BS02 BN3 2.4.1.1 GO:0000166 ... P00489 15987904 MOAD: ic50=1.6uM
    2840 1wv0:A (2.26) BS02 BN4 2.4.1.1 GO:0000166 ... P00489 15987904 MOAD: ic50=2.9uM
    2841 1wv1:A (2.26) BS02 BN5 2.4.1.1 GO:0000166 ... P00489 15987904 MOAD: ic50=2.8uM
    2842 1wva:A (1.94) BS03 S2C 3.5.3.1 GO:0000050 ... P05089 16141327 MOAD: Kd=270nM
    PDBbind: -logKd/Ki=6.57, Kd=270nM
    2843 1wva:B (1.94) BS03 S2C 3.5.3.1 GO:0000050 ... P05089 16141327 MOAD: Kd=270nM
    2844 1wvj:A (1.75) BS01 IBC ? GO:0015276 ... P19491 15794751 MOAD: Ki=185nM
    PDBbind: -logKd/Ki=6.73, Ki=185nM
    2845 1ww2:A (1.9) BS01 NBG 2.4.1.1 GO:0000166 ... P00489 16213146 MOAD: Ki=32uM
    BindingDB: Ki=32000nM
    2846 1ww3:A (1.8) BS01 NTF 2.4.1.1 GO:0000166 ... P00489 16213146 MOAD: Ki=75uM
    BindingDB: Ki=81000nM
    2847 1wzy:A (2.5) BS01 F29 2.7.11.24 GO:0000165 ... P28482 16242327 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    BindingDB: IC50=560nM
    2848 1x07:A (2.2) BS02 IPE 2.5.1.31 GO:0000287 ... P60472 15788389 MOAD: Kd=520uM
    PDBbind: -logKd/Ki=3.28, Kd=520uM
    2849 1x09:A (1.87) BS01 IPE 2.5.1.31 GO:0000287 ... P60472 15788389 MOAD: Kd=520uM
    2850 1x09:A (1.87) BS02 IPE 2.5.1.31 GO:0000287 ... P60472 15788389 MOAD: Kd=520uM
    2851 1x1z:A (1.45) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 16248642 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    2852 1x1z:A (1.45) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 16248642 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    2853 1x38:A (1.698) BS02 IDD 3.2.1.21 GO:0004553 ... Q9XEI3 16342944 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    2854 1x39:A (1.8) BS02 IDE 3.2.1.21 GO:0004553 ... Q9XEI3 16342944 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    2855 1x70:A (2.1) BS01 715 3.4.14.5 GO:0001618 ... P27487 15634008 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM, Kd=1.3nM
    2856 1x70:B (2.1) BS01 715 3.4.14.5 GO:0001618 ... P27487 15634008 MOAD: ic50=18nM
    BindingDB: IC50=18nM, Kd=1.3nM
    2857 1x76:A (2.2) BS02 697 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=1.9nM
    PDBbind: -logKd/Ki=8.72, IC50=1.9nM
    BindingDB: IC50=2.2nM
    2858 1x76:B (2.2) BS02 697 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=1.9nM
    BindingDB: IC50=2.2nM
    2859 1x78:A (2.3) BS02 244 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14.0nM
    BindingDB: IC50=14nM
    2860 1x78:B (2.3) BS02 244 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    2861 1x7b:A (2.3) BS02 041 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=4.1nM
    PDBbind: -logKd/Ki=8.39, IC50=4.1nM
    BindingDB: IC50=5nM
    2862 1x7b:B (2.3) BS02 041 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=4.1nM
    BindingDB: IC50=5nM
    2863 1x7j:A (2.3) BS02 GEN ? GO:0003677 ... Q92731 15576033 MOAD: ic50=9nM
    BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    2864 1x7j:B (2.3) BS02 GEN ? GO:0003677 ... Q92731 15576033 MOAD: ic50=9nM
    BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    2865 1x7r:A (2.0) BS02 GEN ? N/A P03372 15576033 MOAD: ic50=360nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=395nM, EC50=240nM, Ki=370nM
    2866 1x8b:A (1.81) BS03 824 2.7.10.2 GO:0004672 ... P30291 15837193 MOAD: ic50=97nM
    PDBbind: -logKd/Ki=7.01, IC50=97nM
    BindingDB: IC50=97nM
    2867 1x8d:A (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    PDBbind: -logKd/Ki=2.21, Kd=6.16mM
    2868 1x8d:B (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    PDBbind: -logKd/Ki=2.21, Kd=6.16mM
    2869 1x8d:C (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    2870 1x8d:D (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    2871 1x8j:A (2.35) BS03 AOI ? GO:0005737 ... Q26490 15608121 MOAD: Ki=0.11uM
    PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    2872 1x8j:B (2.35) BS03 AOI ? GO:0005737 ... Q26490 15608121 MOAD: Ki=0.11uM
    2873 1x8r:A (1.5) BS01 SC1 2.5.1.19 GO:0003824 ... P0A6D3 15736934 MOAD: Ki=2.9uM
    PDBbind: -logKd/Ki=6.12, Ki=750nM
    BindingDB: Kd=15nM, Ki=15nM
    2874 1x8t:A (1.9) BS01 RC1 2.5.1.19 GO:0003824 ... P0A6D3 15736934 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    2875 1x8v:A (1.55) BS02 ESL 1.14.15.36 GO:0004497 ... P9WPP9 15530358 MOAD: Kd=100uM
    2876 1x8v:A (1.55) BS03 ESL 1.14.15.36 GO:0004497 ... P9WPP9 15530358 MOAD: Kd=100uM
    2877 1x97:A (1.4) BS02 FIR 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 15317464 MOAD: ic50=0.57uM
    BindingDB: IC50=570nM
    2878 1x9q:A (1.5) BS01 FLU N/A N/A N/A 15465055 MOAD: Kd=0.27pM
    2879 1xa5:A (2.12) BS05 KAR ? GO:0000922 ... P62157 15596444 MOAD: Kd=316nM
    PDBbind: -logKd/Ki=6.50, Kd=316nM
    2880 1xap:A (2.1) BS01 TTB ? GO:0003677 ... P10826 15319780 MOAD: Kd=2.5nM
    PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: EC50=4nM, Ki=0.500000nM, Kd=5nM, IC50=5nM
    2881 1xbb:A (1.57) BS01 STI 2.7.10.2 GO:0004672 ... P43405 15507431 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5.0uM
    BindingDB: Ki=5000nM, Kd=>10000nM, IC50=>10000nM
    2882 1xbc:A (2.0) BS01 STU 2.7.10.2 GO:0004672 ... P43405 15507431 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    2883 1xbo:A (2.5) BS01 IX1 3.1.3.48 GO:0004725 ... P18031 15482920 MOAD: Ki=0.92uM
    PDBbind: -logKd/Ki=6.04, Ki=0.92uM
    BindingDB: IC50=920nM
    2884 1xc7:A (1.83) BS01 GL6 2.4.1.1 GO:0000166 ... P00489 15653344 MOAD: Ki=5.1mM
    BindingDB: Ki=5900000nM
    2885 1xd0:A (2.0) BS01 ARE 3.2.1.1 GO:0003824 ... P04746 15736945 MOAD: Ki=0.075uM
    PDBbind: -logKd/Ki=7.12, Ki=0.075uM
    2886 1xd1:A (2.2) BS01 6SA 3.2.1.1 GO:0003824 ... P04746 15736945 MOAD: Ki=0.012uM
    BindingDB: Ki=12nM
    2887 1xdd:A (2.2) BS02 AAY ? N/A P20701 15304496 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    2888 1xdd:A (2.2) BS03 AAY ? N/A P20701 15304496 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    2889 1xdd:B (2.2) BS01 AAY ? N/A P20701 15304496 MOAD: ic50=0.2uM
    2890 1xdd:B (2.2) BS03 AAY ? N/A P20701 15304496 MOAD: ic50=0.2uM
    2891 1xdg:A (2.1) BS02 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    2892 1xdg:A (2.1) BS03 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    2893 1xdg:B (2.1) BS01 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    BindingDB: IC50=50nM
    2894 1xdg:B (2.1) BS03 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    BindingDB: IC50=50nM
    2895 1xff:A (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    2896 1xff:B (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    2897 1xge:A (1.9) BS03 DOR 3.5.2.3 GO:0004151 ... P05020 15826651 MOAD: Kd=20.8uM
    PDBbind: -logKd/Ki=4.68, Kd=20.8uM
    2898 1xgi:B (1.96) BS01 NST 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    2899 1xgj:A (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    BindingDB: Ki=1000nM
    2900 1xgj:B (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    BindingDB: Ki=1000nM
    2901 1xh4:A (2.45) BS02 R69 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=34nM
    PDBbind: -logKd/Ki=7.47, Kd=34nM
    BindingDB: IC50=30nM
    2902 1xh5:A (2.05) BS02 R68 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=3400nM
    PDBbind: -logKd/Ki=5.47, Kd=3400nM
    2903 1xh6:A (1.9) BS02 R94 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=48nM
    PDBbind: -logKd/Ki=7.32, Kd=48nM
    BindingDB: IC50=400nM
    2904 1xh7:A (2.47) BS02 R96 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=150nM
    PDBbind: -logKd/Ki=6.82, Kd=150nM
    BindingDB: IC50=1900nM
    2905 1xh8:A (1.6) BS02 R55 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: ic50=1700nM
    PDBbind: -logKd/Ki=5.77, IC50=1700nM
    BindingDB: IC50=1700nM
    2906 1xh9:A (1.64) BS02 R69 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    BindingDB: IC50=30nM
    2907 1xhy:A (1.85) BS01 KAI ? GO:0015276 ... P19491 15591246 MOAD: Ki=624nM
    PDBbind: -logKd/Ki=6.18, Ki=662nM
    BindingDB: EC50=380000nM, Ki=3690nM
    2908 1xi2:A (1.5) BS03 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    2909 1xi2:A (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    2910 1xi2:B (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    2911 1xjb:A (1.9) BS03 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    2912 1xjb:B (1.9) BS02 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    2913 1xjd:A (2.0) BS01 STU 2.7.11.13 GO:0004672 ... Q04759 15364937 MOAD: Ki=0.33nM
    PDBbind: -logKd/Ki=9.48, Ki=0.33nM
    2914 1xk5:A (2.4) BS01 TPG ? GO:0005634 ... O95149 15920472 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    2915 1xk9:A (2.1) BS01 P34 2.4.2.36 GO:0047286 ... P11439 15458385 MOAD: Ki=140nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    2916 1xk9:B (2.1) BS01 P34 2.4.2.36 GO:0047286 ... P11439 15458385 MOAD: Ki=140nM
    2917 1xka:C (2.3) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    PDBbind: -logKd/Ki=6.88, Ki=131nM
    BindingDB: IC50=270nM
    2918 1xkb:C (2.4) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    BindingDB: IC50=270nM
    2919 1xkb:D (2.4) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    BindingDB: IC50=270nM
    2920 1xkk:A (2.4) BS01 FMM 2.7.10.1 GO:0004672 ... P00533 15374980 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: IC50=11nM, Kd=1.2nM, Ki=3.0nM
    2921 1xkx:A (1.93) BS01 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    2922 1xkx:A (1.93) BS02 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    2923 1xkx:A (1.93) BS03 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    2924 1xl0:A (1.92) BS01 OX2 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=145.2uM
    BindingDB: Ki=145000nM
    2925 1xl1:A (2.1) BS01 TH1 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=76uM
    BindingDB: Ki=76000nM
    2926 1xl2:A (1.5) BS01 189 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15822136 MOAD: Ki=1.5uM
    2927 1xl5:B (1.73) BS01 190 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15822136 MOAD: Ki=45nM
    2928 1xli:A (2.5) BS01 GLT 5.3.1.5 GO:0000287 ... P12070 2319597 MOAD: Ki=33mM
    2929 1xli:B (2.5) BS01 GLT 5.3.1.5 GO:0000287 ... P12070 2319597 MOAD: Ki=33mM
    2930 1xlx:A (2.19) BS02 CIO 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=100nM, Ki=38nM
    2931 1xlx:B (2.19) BS02 CIO 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.025uM
    BindingDB: IC50=100nM, Ki=38nM
    2932 1xlz:A (2.06) BS02 FIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.96uM
    PDBbind: -logKd/Ki=6.02, IC50=0.96uM
    2933 1xlz:B (2.06) BS02 FIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.96uM
    2934 1xm4:A (2.31) BS02 PIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.041nM
    PDBbind: -logKd/Ki=10.39, IC50=0.041nM
    BindingDB: IC50=1nM, Ki=1.5nM
    2935 1xm4:B (2.31) BS02 PIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.041nM
    BindingDB: IC50=1nM, Ki=1.5nM
    2936 1xm6:A (1.92) BS02 5RM 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.42uM
    PDBbind: -logKd/Ki=6.38, IC50=0.42uM
    BindingDB: IC50=420nM
    2937 1xm6:B (1.92) BS02 5RM 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.42uM
    BindingDB: IC50=420nM
    2938 1xmu:A (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    PDBbind: -logKd/Ki=9.08, IC50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    2939 1xmu:B (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    2940 1xmy:A (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=7.30, IC50=50.12nM
    2941 1xmy:B (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    2942 1xn0:A (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    2943 1xn0:A (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    2944 1xn0:B (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    2945 1xn0:B (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    2946 1xnn:A (2.2) BS01 HYQ ? N/A P15207 15603938 MOAD: Ki=0.5nM
    2947 1xnz:A (1.52) BS03 FCD 3.4.11.18 GO:0004177 ... P0AE18 15506752 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=116000nM
    2948 1xoe:A (2.2) BS01 ABX 3.2.1.18 GO:0004308 ... P03472 15582424 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    2949 1xoi:A (2.1) BS03 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    2950 1xoi:A (2.1) BS04 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    2951 1xoi:B (2.1) BS01 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    2952 1xoi:B (2.1) BS04 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    2953 1xom:A (1.55) BS02 CIO 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: IC50=11nM
    2954 1xom:B (1.55) BS02 CIO 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.011uM
    BindingDB: IC50=11nM
    2955 1xon:A (1.72) BS02 PIL 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.021nM
    PDBbind: -logKd/Ki=10.68, IC50=0.021nM
    BindingDB: IC50=21nM
    2956 1xon:B (1.72) BS02 PIL 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.021nM
    BindingDB: IC50=21nM
    2957 1xoq:A (1.83) BS02 ROF 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.68nM
    PDBbind: -logKd/Ki=9.17, IC50=0.68nM
    BindingDB: IC50=0.400000nM
    2958 1xoq:B (1.83) BS02 ROF 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.68nM
    BindingDB: IC50=0.400000nM
    2959 1xor:A (1.54) BS02 ZAR 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=390nM
    2960 1xor:B (1.54) BS02 ZAR 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.39uM
    BindingDB: IC50=390nM
    2961 1xos:A (2.28) BS02 VIA 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    BindingDB: IC50=20000nM
    2962 1xot:A (2.34) BS02 VDN 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=3.8uM
    2963 1xot:B (2.34) BS02 VDN 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=3.8uM
    2964 1xoz:A (1.37) BS02 CIA 3.1.4.35 GO:0004114 ... O76074 15576036 MOAD: ic50=0.0012uM
    PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    BindingDB: IC50=4nM, Ki=10nM
    2965 1xp0:A (1.79) BS02 VDN 3.1.4.35 GO:0004114 ... O76074 15576036 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1.0nM
    BindingDB: IC50=0.890000nM, Ki=1nM
    2966 1xp1:A (1.8) BS01 AIH ? N/A P03372 15582421 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: IC50=0.5nM
    2967 1xp6:A (1.7) BS01 AIU ? N/A P03372 15582421 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    2968 1xp9:A (1.8) BS01 AIJ ? N/A P03372 15582421 MOAD: ic50=1.3nM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.3nM
    2969 1xpc:A (1.6) BS01 AIT ? N/A P03372 15582421 MOAD: ic50=1.7nM
    PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: IC50=1.7nM
    2970 1xpz:A (2.02) BS02 4TZ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15865431 MOAD: Kd=84nM
    PDBbind: -logKd/Ki=7.08, Kd=84nM
    BindingDB: IC50=27nM
    2971 1xq0:A (1.76) BS02 4TR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15865431 MOAD: Kd=454nM
    PDBbind: -logKd/Ki=6.34, Kd=454nM
    BindingDB: IC50=137nM
    2972 1xqc:A (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    PDBbind: -logKd/Ki=7.20, IC50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    2973 1xqc:B (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    2974 1xqc:C (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    2975 1xqc:D (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    2976 1xqd:A (1.8) BS02 DND 1.7.1.14 GO:0004497 ... P23295 15313618 MOAD: Kd=0.07mM
    2977 1xt8:A (2.0) BS01 CYS ? N/A Q0P9S0 15948956 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    2978 1xuc:A (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=7.14, IC50=72nM
    BindingDB: IC50=72nM
    2979 1xuc:B (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    BindingDB: IC50=72nM
    2980 1xud:A (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    2981 1xud:B (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    2982 1xuf:A (1.9) BS02 BAZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    2983 1xug:A (1.5) BS03 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    PDBbind: -logKd/Ki=7.05, Ki=0.09uM
    2984 1xuj:A (1.92) BS02 BOZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki<1nM
    2985 1xuk:A (1.8) BS02 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=19uM
    2986 1xuo:A (1.8) BS02 LA1 ? N/A P20701 15686945 MOAD: ic50=69nM
    PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=69nM
    2987 1xur:A (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    PDBbind: -logKd/Ki=5.18, IC50=6600nM
    BindingDB: IC50=6600nM
    2988 1xur:B (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    BindingDB: IC50=6600nM
    2989 1xw6:A (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    2990 1xw6:B (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    2991 1xw6:C (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    2992 1xw6:D (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    2993 1xz1:A (1.75) BS01 HLT ? GO:0005506 ... P02791 15791007 MOAD: Ka~100000M^-1
    2994 1xzx:X (2.5) BS01 T3 ? GO:0003677 ... P10828 15466465 MOAD: Kd=0.06nM
    PDBbind: -logKd/Ki=10.22, Kd=0.06nM
    2995 1y0l:A (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    2996 1y0l:D (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    2997 1y0l:F (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    2998 1y0l:H (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    2999 1y1m:A (1.8) BS01 AC5 ? GO:0015276 ... P35439 15996549 MOAD: Ki=15.3mM
    PDBbind: -logKd/Ki=1.82, Ki=15.3mM
    3000 1y1m:B (1.8) BS01 AC5 ? GO:0015276 ... P35439 15996549 MOAD: Ki=15.3mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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