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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 10gs:A (2.2) BS01 VWW 2.5.1.18 GO:0000302 ... P09211 9398518 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=420nM
    2 10gs:B (2.2) BS01 VWW 2.5.1.18 GO:0000302 ... P09211 9398518 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=420nM
    3 13gs:A (1.9) BS02 SAS 2.5.1.18 GO:0000302 ... P09211 10452896 MOAD: Ki=24uM
    PDBbind: -logKd/Ki=4.62, Ki=24uM
    4 13gs:B (1.9) BS02 SAS 2.5.1.18 GO:0000302 ... P09211 10452896 MOAD: Ki=24uM
    5 182l:A (1.8) BS01 BZF 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Ka=8900M^-1
    6 183l:A (1.8) BS01 DEN 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Ka=5170M^-1
    7 184l:A (1.8) BS01 I4B 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Ka=51000M^-1
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    8 185l:A (1.8) BS01 IND 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=289uM
    PDBbind: -logKd/Ki=3.54, Kd=290uM
    9 186l:A (1.8) BS01 N4B 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    10 187l:A (1.8) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=422uM
    PDBbind: -logKd/Ki=3.37, Kd=422uM
    BindingDB: Kd=151000nM
    11 188l:A (1.8) BS01 OXE 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Kd=469uM
    PDBbind: -logKd/Ki=3.33, Kd=470uM
    12 1a0q:H (2.3) BS02 HEP ? N/A P01869 9753552 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    13 1a28:A (1.8) BS01 STR ? N/A P06401 9620806 MOAD: Ki=5.1nM
    PDBbind: -logKd/Ki=8.29, Ki=5.1nM
    BindingDB: Ki=3.5nM, EC50=2.9nM, IC50=>10000nM
    14 1a28:B (1.8) BS01 STR ? N/A P06401 9620806 MOAD: Ki=5.1nM
    BindingDB: Ki=3.5nM, EC50=2.9nM, IC50=>10000nM
    15 1a4g:A (2.2) BS02 ZMR 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    16 1a4g:B (2.2) BS02 ZMR 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=0.004uM
    17 1a4k:B (2.4) BS01 FRA N/A N/A N/A 9506942 MOAD: Kd=0.01uM
    PDBbind: -logKd/Ki=8.00, Kd=0.01uM
    18 1a4k:H (2.4) BS01 FRA N/A N/A N/A 9506942 MOAD: Kd=0.01uM
    19 1a4m:A (1.95) BS02 PRH 3.5.4.4 GO:0000255 ... P03958 9622483 MOAD: Ki~0.1pM
    PDBbind: -logKd/Ki=13.00, Ki~0.1pM
    20 1a4m:B (1.95) BS02 PRH 3.5.4.4 GO:0000255 ... P03958 9622483 MOAD: Ki~0.1pM
    21 1a4m:C (1.95) BS02 PRH 3.5.4.4 GO:0000255 ... P03958 9622483 MOAD: Ki~0.1pM
    22 1a4m:D (1.95) BS02 PRH 3.5.4.4 GO:0000255 ... P03958 9622483 MOAD: Ki~0.1pM
    23 1a4q:A (1.9) BS02 DPC 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=3.6uM
    PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    24 1a4q:B (1.9) BS02 DPC 3.2.1.18 GO:0004308 ... P27907 9526556 MOAD: ic50=3.6uM
    25 1a4r:A (2.5) BS01 GDP 3.6.5.2 GO:0000139 ... P60953 10211824 MOAD: Kd=9.4pM
    26 1a4r:B (2.5) BS01 GNH 3.6.5.2 GO:0000139 ... P60953 10211824 MOAD: Kd=0.22uM
    PDBbind: -logKd/Ki=6.66, Kd=0.22uM
    27 1a4w:H (1.8) BS03 QWE 3.4.21.5 GO:0004252 ... P00734 8913620 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    28 1a50:A (2.3) BS01 FIP 4.2.1.20 GO:0000162 ... P00929 9548921 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    29 1a5s:A (2.3) BS01 FIP 4.2.1.20 GO:0000162 ... P00929 9548921 MOAD: Kd=0.35uM
    30 1a5v:A (1.9) BS02 Y3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... O92956 9560188 MOAD: ic50=800uM
    PDBbind: -logKd/Ki=3.10, IC50=800uM
    31 1a69:A (2.1) BS01 FMB 2.4.2.1 GO:0003824 ... P0ABP8 9653038 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    32 1a69:B (2.1) BS01 FMB 2.4.2.1 GO:0003824 ... P0ABP8 9653038 MOAD: Ki=5uM
    33 1a69:C (2.1) BS01 FMB 2.4.2.1 GO:0003824 ... P0ABP8 9653038 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    34 1a7x:B (2.0) BS01 FKA 5.2.1.8 GO:0000413 ... P62942 9871618 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    35 1a8g:A (2.5) BS01 2Z4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 10047488 MOAD: Ki=7.4nM
    36 1a8i:A (1.78) BS01 GLS 2.4.1.1 GO:0000166 ... P00489 9568898 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    BindingDB: Ki=3100nM, IC50=3100nM
    37 1a94:A (2.0) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 9521772 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    38 1a94:E (2.0) BS01 0Q4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 9521772 MOAD: Ki=14nM
    39 1a99:A (2.2) BS01 PUT ? GO:0015846 ... P31133 9651355 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    40 1a99:B (2.2) BS01 PUT ? GO:0015846 ... P31133 9651355 MOAD: Kd=2uM
    41 1a99:C (2.2) BS01 PUT ? GO:0015846 ... P31133 9651355 MOAD: Kd=2uM
    42 1a99:D (2.2) BS01 PUT ? GO:0015846 ... P31133 9651355 MOAD: Kd=2uM
    43 1a9m:B (2.3) BS01 U0E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9450540 MOAD: Ki=119nM
    PDBbind: -logKd/Ki=6.92, Ki=119nM
    44 1aaq:B (2.5) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 1637805 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.40, Ki=4.0nM
    45 1abf:A (1.9) BS01 FCA ? GO:0015407 ... P02924 2818726 MOAD: Kd=3.8uM
    PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    46 1abf:A (1.9) BS02 FCB ? GO:0015407 ... P02924 2818726 MOAD: Kd=3.8uM
    47 1add:A (2.4) BS02 1DA 3.5.4.4 GO:0000255 ... P03958 8439534 MOAD: Ki=0.18uM
    PDBbind: -logKd/Ki=6.74, Ki=0.18uM
    48 1adl:A (1.6) BS01 ACD ? GO:0005324 ... P04117 7929228 MOAD: Kd=4.4uM
    PDBbind: -logKd/Ki=5.36, Kd=4.4uM
    49 1afk:A (1.7) BS01 PAP 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=240nM
    PDBbind: -logKd/Ki=6.62, Ki=240nM
    50 1afk:B (1.7) BS01 PAP 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=240nM
    51 1afl:A (1.7) BS01 ATR 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=520nM
    PDBbind: -logKd/Ki=6.28, Ki=520nM
    52 1afl:B (1.7) BS01 ATR 4.6.1.18 GO:0003676 ... P61823 9154942 MOAD: Ki=520nM
    53 1ag9:A (1.8) BS02 FMN ? GO:0000166 ... P61949 9416602 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    54 1ag9:B (1.8) BS02 FMN ? GO:0000166 ... P61949 9416602 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    55 1ahx:A (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    PDBbind: -logKd/Ki=3.92, Kd=120uM
    56 1ahx:B (2.0) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 7664122 MOAD: Kd=120uM
    PDBbind: -logKd/Ki=3.92, Kd=120uM
    57 1ai2:A (1.9) BS01 NAP 1.1.1.42 GO:0000287 ... P08200 9211842 MOAD: Ki=2.7uM
    58 1ai3:A (1.9) BS01 NDO 1.1.1.42 GO:0000287 ... P08200 9211842 MOAD: Ki=403uM
    59 1ai4:B (2.35) BS02 DHY 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=3.13mM
    PDBbind: -logKd/Ki=2.50, Ki=3.13mM
    60 1ai5:B (2.36) BS02 MNP 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=0.189mM
    PDBbind: -logKd/Ki=3.72, Ki=0.189mM
    61 1aid:B (2.2) BS01 THK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 8340363 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    62 1aj6:A (2.3) BS01 NOV 5.6.2.2 GO:0003677 ... P0AES6 9245398 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    BindingDB: IC50=170nM, Kd=7.0nM, Ki=7.0nM
    63 1aj7:H (2.1) BS01 NPE ? N/A P01857 9180069 MOAD: Kd=135uM
    PDBbind: -logKd/Ki=3.87, Kd=135uM
    64 1ajn:B (2.36) BS02 AAN 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=2.32mM
    PDBbind: -logKd/Ki=2.63, Ki=2.32mM
    65 1ajq:B (2.05) BS02 SPA 3.5.1.11 GO:0016787 ... P06875 9813130 MOAD: Ki=0.049mM
    PDBbind: -logKd/Ki=4.31, Ki=0.049mM
    66 1ajv:A (2.0) BS01 NMB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 MOAD: Ki=19.1nM
    PDBbind: -logKd/Ki=7.72, Ki=19.1nM
    67 1ajx:A (2.0) BS01 AH1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9083478 MOAD: Ki=12.2nM
    PDBbind: -logKd/Ki=7.91, Ki=12.2nM
    68 1akq:A (1.9) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=0.79nM
    PDBbind: -logKd/Ki=9.10, Kd=0.79nM
    69 1akr:A (1.58) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=0.82nM
    PDBbind: -logKd/Ki=9.09, Kd=0.82nM
    70 1akt:A (1.8) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    71 1aku:A (1.9) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=746nM
    PDBbind: -logKd/Ki=6.13, Kd=746nM
    72 1akv:A (2.0) BS01 FMN ? GO:0009055 ... P00323 12206666 MOAD: Kd=0.0026nM
    PDBbind: -logKd/Ki=11.59, Kd=0.0026nM
    73 1akw:A (1.75) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=2.6nM
    PDBbind: -logKd/Ki=8.59, Kd=2.6nM
    74 1al8:A (2.2) BS02 DHP 1.1.3.15 GO:0003973 ... P05414 9144771 MOAD: Ki=4.8uM
    PDBbind: -logKd/Ki=5.32, Ki=4.8uM
    75 1alw:A (2.03) BS05 ISA ? GO:0005509 ... P04574 9228946 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    76 1alw:B (2.03) BS05 ISA ? GO:0005509 ... P04574 9228946 MOAD: Ki=0.3uM
    77 1am1:A (2.0) BS01 ADP ? GO:0005524 ... P02829 9230303 MOAD: Kd=132mM
    78 1amk:A (1.83) BS01 PGA 5.3.1.1 GO:0004807 ... P48499 10235625 MOAD: Ki=0.05mM
    PDBbind: -logKd/Ki=4.30, Ki=50uM
    79 1amw:A (1.85) BS01 ADP ? GO:0005524 ... P02829 9230303 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    80 1aoe:A (1.6) BS02 GW3 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: Ki=0.22nM
    BindingDB: IC50=4nM, Ki=0.22nM
    81 1aoe:B (1.6) BS02 GW3 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: Ki=0.22nM
    BindingDB: IC50=4nM, Ki=0.22nM
    82 1apb:A (1.76) BS01 FCA ? GO:0015407 ... P02924 2204627 MOAD: Kd=1.51uM
    83 1apb:A (1.76) BS02 FCB ? GO:0015407 ... P02924 2204627 MOAD: Kd=1.51uM
    PDBbind: -logKd/Ki=5.82, Kd=1.51uM
    84 1atl:A (1.8) BS03 0QI 3.4.24.42 GO:0004222 ... P15167 8078901 MOAD: Ki=0.52uM
    85 1atl:B (1.8) BS03 0QI 3.4.24.42 GO:0004222 ... P15167 8078901 MOAD: Ki=0.52uM
    86 1atp:E (2.2) BS03 ATP 2.7.11.11 GO:0000122 ... P05132 15299527 MOAD: Kd=60nM
    87 1avn:A (2.0) BS03 HSM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9265618 MOAD: Kd=0.125mM
    PDBbind: -logKd/Ki=3.90, Kd=0.125mM
    88 1axr:A (2.3) BS02 HTP 2.4.1.1 GO:0000166 ... P00489 N/A MOAD: Ki=540uM
    PDBbind: -logKd/Ki=3.27, Ki=540uM
    89 1axz:A (1.95) BS01 GLA ? GO:0030246 ... P16404 9545381 MOAD: Ka=1570M^-1
    90 1axz:A (1.95) BS02 GAL ? GO:0030246 ... P16404 9545381 MOAD: Ka=1570M^-1
    PDBbind: -logKd/Ki=3.20, Kd=0.637mM
    91 1azl:A (1.8) BS01 FMN ? GO:0009055 ... P00323 9622492 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    92 1b11:A (1.9) BS01 3TL 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23    		 GO:0004190 ... P16088 10651036 MOAD: Ki=41nM
    PDBbind: -logKd/Ki=7.39, Ki=41nM
    93 1b38:A (2.0) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10085115 MOAD: Kd=0.254uM
    PDBbind: -logKd/Ki=6.60, Kd=0.254uM
    94 1b39:A (2.1) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 10085115 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.120uM
    95 1b42:A (2.2) BS02 M1A 2.1.1.57 GO:0003746 ... P07617 10377383 MOAD: Kd=97.9uM
    PDBbind: -logKd/Ki=4.01, Kd=97.9uM
    96 1b4d:A (2.0) BS01 CRA 2.4.1.1 GO:0000166 ... P00489 10211820 MOAD: Ki=15.6uM
    PDBbind: -logKd/Ki=4.81, Ki=15.6uM
    BindingDB: Ki=16000nM
    97 1b55:A (2.4) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    98 1b55:B (2.4) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    99 1b5q:A (1.9) BS02 MD2 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296 MOAD: Ki=550nM
    100 1b5q:B (1.9) BS02 MD2 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296 MOAD: Ki=550nM
    101 1b5q:C (1.9) BS02 MD2 1.5.3.14
    1.5.3.15    		 GO:0006598 ... O64411 10368296 MOAD: Ki=550nM
    102 1b6k:A (1.85) BS01 PI5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    103 1b6l:A (1.75) BS01 PI4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    104 1b6m:B (1.85) BS01 PI6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    105 1b6p:A (2.0) BS01 PI7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 10387041 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    106 1b74:A (2.3) BS01 DGN 5.1.1.3 GO:0008360 ... P56868 10331867 MOAD: Ki=50mM
    PDBbind: -logKd/Ki=1.30, Ki=50mM
    107 1b8n:A (2.0) BS01 IMG 2.4.2.1 GO:0003824 ... P55859 12463747 MOAD: Ki=30pM
    PDBbind: -logKd/Ki=10.52, Ki=30pM
    BindingDB: Ki=0.030000nM
    108 1b8o:A (1.5) BS02 IMH 2.4.2.1 GO:0003824 ... P55859 11170405 MOAD: Ki=23pM
    PDBbind: -logKd/Ki=10.64, Ki=23pM
    109 1b8y:A (2.0) BS06 IN7 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    110 1b9s:A (2.5) BS02 FDI 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50>667uM
    PDBbind: -logKd/Ki=3.18, IC50>667uM
    BindingDB: IC50=670000nM
    111 1b9t:A (2.4) BS02 RAI 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50=8uM
    PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    112 1b9v:A (2.35) BS02 RA2 3.2.1.18 GO:0004308 ... P03474 10547289 MOAD: ic50=224uM
    PDBbind: -logKd/Ki=3.65, IC50=224uM
    BindingDB: IC50=271000nM
    113 1bai:A (2.4) BS01 0Q4 3.4.23.- GO:0004190 ... P03322 9521772 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    114 1bap:A (1.75) BS01 ARA ? GO:0015407 ... P02924 2204627 MOAD: Kd=0.14uM
    115 1bap:A (1.75) BS02 ARB ? GO:0015407 ... P02924 2204627 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    116 1bb6:A (2.0) BS01 UMG 3.2.1.17 GO:0003796 ... P11941 10089395 MOAD: Ka=500000M^-1
    117 1bb7:A (2.0) BS01 GUM 3.2.1.17 GO:0003796 ... P11941 10089395 MOAD: Ka=15000M^-1
    118 1bcd:A (1.9) BS02 FMS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8070585 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Kd=130nM, IC50=13nM
    119 1bcu:H (2.0) BS03 PRL 3.4.21.5 GO:0004252 ... P00734 9559654 MOAD: Kd=0.53mM
    PDBbind: -logKd/Ki=3.28, Kd=0.53mM
    BindingDB: IC50=12000nM
    120 1bdq:B (2.5) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 9692985 MOAD: Ki=460nM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    121 1bfv:H (2.1) BS01 STG ? GO:0002250 ... P18529 9261086 MOAD: Ka~10000000M^-1
    122 1bgq:A (2.5) BS01 RDC ? GO:0005524 ... P02829 9925731 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    BindingDB: IC50=2e+2nM
    123 1bhx:F (2.3) BS01 R56 3.4.21.5 GO:0004252 ... P00734 9733491 MOAD: Ki=0.145uM
    PDBbind: -logKd/Ki=6.84, Ki=0.145uM
    BindingDB: Ki=145nM
    124 1bil:A (2.4) BS01 0IU 3.4.23.15 GO:0004190 ... P00797 7493993 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    125 1bil:B (2.4) BS01 0IU 3.4.23.15 GO:0004190 ... P00797 7493993 MOAD: ic50=0.5nM
    126 1bir:A (1.8) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8844843 MOAD: Kd=138uM
    127 1bir:B (1.8) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8844843 MOAD: Kd=138uM
    128 1biw:B (2.5) BS06 S80 3.4.24.17 GO:0004222 ... P08254 9873489 MOAD: ic50=104nM
    PDBbind: -logKd/Ki=6.98, IC50=104nM
    BindingDB: IC50=104nM
    129 1bji:A (2.0) BS02 DPC 3.2.1.18 GO:0004308 ... P03472 9526556 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    130 1bju:A (1.8) BS03 GP6 3.4.21.4 GO:0004175 ... P00760 9836602 MOAD: Ki=6.2uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    131 1bjv:A (1.8) BS04 GP8 3.4.21.4 GO:0004175 ... P00760 9836602 MOAD: Ki=13uM
    PDBbind: -logKd/Ki=5.54, Ki=2.9uM
    132 1bkf:A (1.6) BS01 FK5 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Ki=2.1nM
    BindingDB: Kd=0.200000nM, EC50=0.900000nM, Ki=0.40nM, IC50=2.3nM
    133 1bkj:A (1.8) BS01 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    134 1bkj:A (1.8) BS02 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    135 1bkj:B (1.8) BS01 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    136 1bkj:B (1.8) BS02 FMN 1.5.1.38 GO:0008218 ... Q56691 8885832 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    137 1bky:A (2.0) BS02 1MC 2.1.1.57 GO:0003723 ... P07617 10377383 MOAD: Kd=144uM
    PDBbind: -logKd/Ki=3.84, Kd=144uM
    138 1bl4:A (1.9) BS01 AP1 5.2.1.8 GO:0000413 ... P62942 9724721 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=8.2nM
    139 1bl4:B (1.9) BS01 AP1 5.2.1.8 GO:0000413 ... P62942 9724721 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=8.2nM
    140 1bm7:A (2.0) BS01 FLF ? GO:0005179 ... P02766 9789022 MOAD: Kd=30nM
    PDBbind: -logKd/Ki=7.52, Kd=30nM
    BindingDB: IC50=2900nM
    141 1bm7:B (2.0) BS01 FLF ? GO:0005179 ... P02766 9789022 MOAD: Kd=30nM
    PDBbind: -logKd/Ki=7.52, Kd=30nM
    BindingDB: IC50=2900nM
    142 1bma:A (1.8) BS02 0QH 3.4.21.36 GO:0004252 ... P00772 7604279 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    143 1bn1:A (2.1) BS02 AL5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.46nM
    PDBbind: -logKd/Ki=9.34, Kd=0.46nM
    BindingDB: Kd=0.46nM
    144 1bn3:A (2.2) BS02 AL6 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.13nM
    PDBbind: -logKd/Ki=9.89, Kd=0.13nM
    BindingDB: Kd=0.13nM
    145 1bn4:A (2.1) BS02 AL9 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.49nM
    PDBbind: -logKd/Ki=9.31, Kd=0.49nM
    BindingDB: Kd=0.49nM
    146 1bnn:A (2.3) BS02 AL1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.1nM
    PDBbind: -logKd/Ki=10.00, Kd=0.10nM
    BindingDB: Kd=0.1nM
    147 1bnq:A (2.4) BS02 AL4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.32nM
    PDBbind: -logKd/Ki=9.49, Kd=0.32nM
    BindingDB: Kd=0.32nM
    148 1bnt:A (2.15) BS02 AL2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.16nM
    PDBbind: -logKd/Ki=9.80, Kd=0.16nM
    BindingDB: Kd=0.16nM
    149 1bnu:A (2.15) BS02 AL3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.20nM
    BindingDB: Kd=0.2nM
    150 1bnv:A (2.4) BS02 AL7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=1.7nM
    PDBbind: -logKd/Ki=8.77, Kd=1.70nM
    BindingDB: Kd=1.7nM
    151 1bnw:A (2.25) BS02 TPD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9865942 MOAD: Kd=0.83nM
    PDBbind: -logKd/Ki=9.08, Kd=0.83nM
    BindingDB: Kd=0.83nM
    152 1boz:A (2.1) BS02 PRD 1.5.1.3 GO:0000900 ... P00374 9719595 MOAD: ic50=8500nM
    BindingDB: IC50=28nM
    153 1bp0:A (2.4) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 10653645 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    154 1bq4:A (2.5) BS01 BHC 5.4.2.11 GO:0003824 ... P00950 10369755 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    155 1bqo:B (2.3) BS06 N25 3.4.24.17 GO:0004222 ... P08254 9733482 MOAD: ic50=18.4nM
    PDBbind: -logKd/Ki=7.74, IC50=18.4nM
    BindingDB: IC50=18nM, Ki=18nM
    156 1br5:A (2.5) BS01 NEO 3.2.2.22 GO:0017148 ... P02879 9086280 MOAD: Ki>2mM
    PDBbind: -logKd/Ki=2.70, Ki>2mM
    157 1br6:A (2.3) BS01 PT1 3.2.2.22 GO:0017148 ... P02879 9086280 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    158 1bra:A (2.2) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 8478942 MOAD: Ki=15000uM
    PDBbind: -logKd/Ki=1.82, Ki=15000uM
    159 1btn:A (2.0) BS01 I3P ? GO:0005543 ... Q62261 7588597 MOAD: Kd=40uM
    PDBbind: -logKd/Ki=4.40, Kd=40uM
    160 1bto:A (2.0) BS04 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    161 1bto:A (2.0) BS05 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    162 1bto:B (2.0) BS04 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    163 1bto:B (2.0) BS05 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    164 1bto:C (2.0) BS01 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    165 1bto:C (2.0) BS05 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    166 1bto:D (2.0) BS01 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    167 1bto:D (2.0) BS05 SSB 1.1.1.1 GO:0004022 ... P00327 9003191 MOAD: Ki=0.31uM
    168 1bv7:A (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    169 1bv9:A (2.0) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    170 1bwa:B (1.9) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=2.5nM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    171 1bwb:B (1.8) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9790666 MOAD: Ki=3.8nM
    PDBbind: -logKd/Ki=8.42, Ki=3.8nM
    172 1bwn:A (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    173 1bwn:A (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    174 1bwn:B (2.1) BS02 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    175 1bwn:B (2.1) BS03 4IP 2.7.10.2 GO:0035556 ... Q06187 10196129 MOAD: Kd=87nM
    PDBbind: -logKd/Ki=7.06, Kd=87nM
    176 1bxo:A (0.95) BS02 PP7 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    177 1bxq:A (1.41) BS01 PP8 3.4.23.20 GO:0004190 ... P00798 9836576 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    178 1bzc:A (2.35) BS01 TPI 3.1.3.48 GO:0004725 ... P18031 9922143 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    179 1bzj:A (2.25) BS01 PIC 3.1.3.48 GO:0004725 ... P18031 9922143 MOAD: Ki=22uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    BindingDB: Ki=22000nM
    180 1bzs:A (1.7) BS05 BSI 3.4.24.34 GO:0004222 ... P22894 10354399 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    181 1bzy:A (2.0) BS01 IMU 2.4.2.8 GO:0000166 ... P00492 10360366 MOAD: Kd=4.6nM
    PDBbind: -logKd/Ki=8.34, Kd=4.6nM
    BindingDB: Ki=4.6nM
    182 1bzy:B (2.0) BS01 IMU 2.4.2.8 GO:0000166 ... P00492 10360366 MOAD: Kd=4.6nM
    BindingDB: Ki=4.6nM
    183 1bzy:C (2.0) BS01 IMU 2.4.2.8 GO:0000166 ... P00492 10360366 MOAD: Kd=4.6nM
    BindingDB: Ki=4.6nM
    184 1bzy:D (2.0) BS01 IMU 2.4.2.8 GO:0000166 ... P00492 10360366 MOAD: Kd=4.6nM
    BindingDB: Ki=4.6nM
    185 1c0i:A (1.9) BS02 BE2 1.4.3.3 GO:0003884 ... P80324 12445787 MOAD: Kd=2mM
    186 1c0i:A (1.9) BS03 BE2 1.4.3.3 GO:0003884 ... P80324 12445787 MOAD: Kd=2mM
    187 1c0l:A (1.73) BS01 FLA 1.4.3.3 GO:0003884 ... P80324 11070076 MOAD: Kd=6.2mM
    188 1c14:A (2.0) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10595560 MOAD: ic50=120nM
    BindingDB: IC50=430nM
    189 1c14:B (2.0) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10595560 MOAD: ic50=120nM
    BindingDB: IC50=430nM
    190 1c1r:A (1.37) BS04 BAI 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.0235uM
    PDBbind: -logKd/Ki=7.63, Ki=0.0235uM
    191 1c1v:H (1.98) BS03 BAB 3.4.21.5 GO:0004252 ... P00734 9468142 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=0.023uM
    192 1c29:A (2.3) BS01 HE1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=472nM
    PDBbind: -logKd/Ki=6.33, IC50=472nM
    193 1c2d:A (1.65) BS04 BAK 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.0052uM
    194 1c2t:A (2.1) BS01 NHS 2.1.2.2 GO:0003824 ... P08179 10606510 MOAD: Ki=260nM
    195 1c2t:B (2.1) BS01 NHS 2.1.2.2 GO:0003824 ... P08179 10606510 MOAD: Ki=260nM
    PDBbind: -logKd/Ki=6.59, Ki=260nM
    196 1c3v:A (2.39) BS01 NDP 1.17.1.8 GO:0005737 ... P9WP23 12962488 MOAD: Kd=2.1uM
    197 1c3v:B (2.39) BS01 NDP 1.17.1.8 GO:0005737 ... P9WP23 12962488 MOAD: Kd=2.1uM
    198 1c4u:2 (2.1) BS02 IH1 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.043nM
    PDBbind: -logKd/Ki=10.37, Ki=0.043nM
    199 1c4v:2 (2.1) BS02 IH2 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.016nM
    PDBbind: -logKd/Ki=10.80, Ki=0.016nM
    200 1c50:A (2.3) BS02 CHI 2.4.1.1 GO:0000166 ... P00489 10873856 MOAD: ic50=334nM
    PDBbind: -logKd/Ki=6.48, IC50=334nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218