Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12601 3cdb:A (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    PDBbind: -logKd/Ki=7.02, Kd=95.7nM
    12602 3cdb:B (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 PDBbind: -logKd/Ki=7.02, Kd=95.7nM
    12603 3cdb:B (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 PDBbind: -logKd/Ki=7.02, Kd=95.7nM
    12604 3cdb:C (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    12605 3cdb:C (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    12606 3cdb:D (2.3) BS01 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    12607 3cdb:D (2.3) BS02 9HI 1.1.1.34 GO:0004420 ... P04035 18540668 MOAD: Kd=95.7nM
    12608 3cde:A (2.1) BS01 N3H 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18457949 MOAD: ic50<0.01uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=<10nM, EC50=5nM
    12609 3cde:B (2.1) BS01 N3H 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18457949 MOAD: ic50<0.01uM
    BindingDB: IC50=<10nM, EC50=5nM
    12610 3cdp:A (2.8) BS01 YRG ? GO:0003677 ... P37231 22341573 BindingDB: EC50=2692nM
    12611 3cds:A (2.65) BS01 GRR ? GO:0003677 ... P37231 19053776 BindingDB: EC50=3600nM
    12612 3ce0:A (2.8) BS01 P34 2.4.2.- GO:0003950 ... Q9Y6F1 19354255 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    BindingDB: IC50=1430nM
    12613 3ce3:A (2.4) BS01 1FN 2.7.10.1 GO:0004672 ... P08581 18690676 MOAD: ic50=1.8nM
    PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    BindingDB: IC50=1.8nM
    12614 3ce6:A (1.6) BS01 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    12615 3ce6:B (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    12616 3ce6:C (1.6) BS01 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    12617 3ce6:D (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... P9WGV3 18815415 MOAD: ic50~500uM
    12618 3cem:A (2.47) BS03 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    12619 3cem:A (2.47) BS04 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    12620 3cem:B (2.47) BS01 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    12621 3cem:B (2.47) BS04 AVD 2.4.1.1 GO:0000166 ... P06737 18373353 MOAD: Kd=24nM
    12622 3cen:A (1.6) BS01 FXA 3.4.21.6 GO:0004252 ... P00742 18424044 MOAD: Ki=5.5nM
    PDBbind: -logKd/Ki=8.26, Ki=5.5nM
    BindingDB: Ki=5.5nM
    12623 3cf1:A (4.4) BS01 ADP 3.6.4.6 GO:0000502 ... Q01853 18462676 PDBbind: -logKd/Ki=6.64, Kd=230nM
    12624 3cf1:A (4.4) BS02 ADP 3.6.4.6 GO:0000502 ... Q01853 18462676 PDBbind: -logKd/Ki=6.64, Kd=230nM
    12625 3cf8:A (2.4) BS01 QUE 4.2.1.59 GO:0005737 ... Q5G940 18780820 MOAD: Ki=12.7uM
    PDBbind: -logKd/Ki=4.90, Ki=12.7uM
    12626 3cf8:B (2.4) BS01 QUE 4.2.1.59 GO:0005737 ... Q5G940 18780820 PDBbind: -logKd/Ki=4.90, Ki=12.7uM
    12627 3cf8:C (2.4) BS01 QUE 4.2.1.59 GO:0005737 ... Q5G940 18780820 MOAD: Ki=12.7uM
    12628 3cf9:A (2.6) BS01 AGI 4.2.1.59 GO:0005737 ... Q5G940 18780820 PDBbind: -logKd/Ki=4.83, Ki=14.9uM
    12629 3cf9:B (2.6) BS01 AGI 4.2.1.59 GO:0005737 ... Q5G940 18780820 PDBbind: -logKd/Ki=4.83, Ki=14.9uM
    12630 3cfn:A (1.87) BS01 2AN ? GO:0005179 ... P02766 19954984 MOAD: Kd=4.3uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    BindingDB: Kd=1100nM
    12631 3cfn:B (1.87) BS01 2AN ? GO:0005179 ... P02766 19954984 MOAD: Kd=4.3uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    BindingDB: Kd=1100nM
    12632 3cfq:A (2.09) BS01 DIF ? GO:0005179 ... P02766 19954984 BindingDB: Kd=1000nM, IC50=140000nM
    12633 3cfq:B (2.09) BS01 DIF ? GO:0005179 ... P02766 19954984 BindingDB: Kd=1000nM, IC50=140000nM
    12634 3cft:A (1.87) BS01 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    12635 3cft:B (1.87) BS01 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    12636 3cft:B (1.87) BS02 5NS ? GO:0005179 ... P02766 19954984 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    BindingDB: Kd=64000nM
    12637 3cgf:A (3.0) BS01 JNF 2.7.11.24 GO:0004672 ... P53779 18482836 PDBbind: -logKd/Ki=6.57, IC50=270nM
    BindingDB: IC50=3nM
    12638 3cgo:A (3.0) BS01 JNO 2.7.11.24 GO:0004672 ... P53779 18482836 PDBbind: -logKd/Ki=5.52, IC50=3uM
    BindingDB: IC50=270nM
    12639 3cgy:A (2.6) BS01 RDC 2.7.13.3
    3.1.3.-    		 GO:0016310 ... P0DM80 18440021 PDBbind: -logKd/Ki=3.15, Kd=715uM
    BindingDB: Kd=715000nM
    12640 3cgy:B (2.6) BS01 RDC 2.7.13.3
    3.1.3.-    		 GO:0016310 ... P0DM80 18440021 BindingDB: Kd=715000nM
    12641 3cgy:C (2.6) BS01 RDC 2.7.13.3
    3.1.3.-    		 GO:0016310 ... P0DM80 18440021 BindingDB: Kd=715000nM
    12642 3ch6:A (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    12643 3ch6:B (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    12644 3ch6:D (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    12645 3ch6:E (2.35) BS02 311 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 18485702 MOAD: ic50=0.1nM
    12646 3ch9:A (2.2) BS01 XRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=500uM
    PDBbind: -logKd/Ki=3.30, IC50=500uM
    12647 3ch9:B (2.2) BS01 XRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=500uM
    12648 3chc:A (1.9) BS01 ZRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=81uM
    PDBbind: -logKd/Ki=4.09, IC50=81uM
    12649 3chc:B (1.9) BS01 ZRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=81uM
    12650 3chd:A (2.0) BS01 WRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=1.2e+4nM
    12651 3chd:B (2.0) BS01 WRG 3.2.1.14 GO:0004553 ... Q873X9 18355729 MOAD: ic50=12uM
    BindingDB: IC50=1.2e+4nM
    12652 3chg:D (2.8) BS01 313 ? GO:0005886 ... P46922 18567662 PDBbind: -logKd/Ki=3.99, Kd=102uM
    12653 3cho:A (1.8) BS02 4BG 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=280nM
    PDBbind: -logKd/Ki=6.55, IC50=280nM
    BindingDB: IC50=300nM
    12654 3chp:A (2.1) BS02 4BO 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=5400nM
    PDBbind: -logKd/Ki=5.27, IC50=5400nM
    BindingDB: IC50=5400nM
    12655 3chq:A (2.09) BS02 4BQ 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    12656 3chr:A (2.2) BS02 4BS 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 MOAD: ic50=61nM
    PDBbind: -logKd/Ki=7.21, IC50=61nM
    BindingDB: IC50=61nM
    12657 3chs:A (2.55) BS02 4BU 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18394906 PDBbind: -logKd/Ki=7.77, IC50=17nM
    12658 3cib:A (1.72) BS01 314 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=522nM
    12659 3cib:B (1.72) BS01 314 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=14nM
    BindingDB: IC50=522nM
    12660 3cic:A (1.75) BS01 316 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=300nM, Ki=3nM
    12661 3cic:B (1.75) BS01 316 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=3nM
    BindingDB: IC50=300nM, Ki=3nM
    12662 3cid:A (1.8) BS01 318 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    12663 3cid:B (1.8) BS01 318 3.4.23.46 GO:0004190 ... P56817 18468890 MOAD: ic50=5nM
    BindingDB: IC50=5nM
    12664 3cj2:A (1.75) BS01 SX3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    12665 3cj2:B (1.75) BS01 SX3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=14uM
    12666 3cj3:A (1.87) BS01 SX4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: ic50=57uM
    PDBbind: -logKd/Ki=4.24, IC50=57uM
    12667 3cj3:B (1.87) BS01 SX4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: ic50=57uM
    12668 3cj4:A (2.07) BS01 SX5 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.31uM
    PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    12669 3cj4:B (2.07) BS01 SX5 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.31uM
    12670 3cj5:A (1.92) BS01 SX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.46uM
    PDBbind: -logKd/Ki=6.34, Kd=0.46uM
    12671 3cj5:B (1.92) BS01 SX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18400495 MOAD: Kd=0.46uM
    12672 3cjf:A (2.15) BS01 SAV 2.7.10.1 GO:0004672 ... P35968 18620382 MOAD: ic50=6.3nM
    PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    BindingDB: IC50=6.3nM
    12673 3cjo:A (2.28) BS02 K30 ? GO:0003777 ... P52732 18578472 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    12674 3cjo:B (2.28) BS02 K30 ? GO:0003777 ... P52732 18578472 MOAD: ic50=2.2nM
    12675 3cke:A (2.4) BS01 FDF 4.2.3.9 GO:0016829 ... Q9UR08 18385128 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    12676 3ckp:A (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    PDBbind: -logKd/Ki=6.35, Ki=0.449uM
    12677 3ckp:B (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    12678 3ckp:C (2.3) BS01 012 3.4.23.46 GO:0004190 ... P56817 18434152 MOAD: Ki=0.449uM
    12679 3ckr:A (2.7) BS01 009 3.4.23.46 GO:0004190 ... P56817 18434152 PDBbind: -logKd/Ki=5.30, Ki=5.001uM
    12680 3ckt:A (1.65) BS01 YDP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21762812 MOAD: Ki=0.48uM
    PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    12681 3ckt:B (1.65) BS01 YDP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21762812 PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    12682 3ckz:A (1.9) BS02 ZMR 3.2.1.18 GO:0004308 ... Q6DPL2 18480754 MOAD: Ki=0.19nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    12683 3cl0:A (2.2) BS01 G39 3.2.1.18 GO:0004308 ... Q6DPL2 18480754 MOAD: Ki=84.8nM
    PDBbind: -logKd/Ki=7.07, Ki=84.8nM
    12684 3cl2:A (2.538) BS01 G39 3.2.1.18 GO:0004308 ... Q6DPL2 18480754 PDBbind: -logKd/Ki=7.59, Ki=25.9nM
    12685 3cla:A (1.75) BS02 CLM 2.3.1.28 GO:0008811 ... P00484 2187098 MOAD: Kd=13uM
    12686 3cld:A (2.84) BS02 GW6 ? N/A P04150 18522385 BindingDB: Ki=0.510000nM, IC50=0.0398nM, EC50=0.400000nM
    12687 3cld:B (2.84) BS02 GW6 ? N/A P04150 18522385 BindingDB: Ki=0.510000nM, IC50=0.0398nM, EC50=0.400000nM
    12688 3clp:A (2.0) BS01 CMP ? GO:0005221 ... Q98GN8 18619611 PDBbind: -logKd/Ki=3.69, Kd=205.1uM
    12689 3clx:A (2.7) BS01 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12690 3clx:A (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12691 3clx:B (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12692 3clx:C (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12693 3clx:C (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12694 3clx:C (2.7) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12695 3clx:D (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12696 3clx:D (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12697 3clx:D (2.7) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12698 3clx:D (2.7) BS05 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12699 3cm2:A (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12700 3cm2:A (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12701 3cm2:B (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12702 3cm2:C (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12703 3cm2:C (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12704 3cm2:D (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    PDBbind: -logKd/Ki=6.47, Ki=340nM
    BindingDB: IC50=110nM
    12705 3cm2:E (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12706 3cm2:F (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12707 3cm2:G (2.5) BS01 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12708 3cm2:G (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12709 3cm2:H (2.5) BS01 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12710 3cm2:H (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12711 3cm2:I (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12712 3cm2:J (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    12713 3cm7:A (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12714 3cm7:B (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 PDBbind: -logKd/Ki=6.57, IC50=270nM
    BindingDB: IC50=290nM
    12715 3cm7:C (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12716 3cm7:C (3.1) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12717 3cm7:C (3.1) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12718 3cm7:D (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12719 3cm7:D (3.1) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12720 3cm7:D (3.1) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    12721 3cn0:A (1.52) BS01 LJ1 ? GO:0005179 ... P02766 18811132 PDBbind: -logKd/Ki=5.51, IC50=3.08uM
    BindingDB: IC50=3080nM
    12722 3cn0:B (1.52) BS01 LJ1 ? GO:0005179 ... P02766 18811132 PDBbind: -logKd/Ki=5.51, IC50=3.08uM
    BindingDB: IC50=3080nM
    12723 3co6:C (2.1) BS01 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=60nM
    12724 3co6:C (2.1) BS02 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=60nM
    12725 3co7:C (2.91) BS01 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=12nM
    12726 3co7:C (2.91) BS02 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=12nM
    12727 3co7:F (2.91) BS01 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=12nM
    12728 3co7:F (2.91) BS02 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=12nM
    12729 3co9:A (2.1) BS01 3MS 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18487044 PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=<10nM, EC50=8.5nM
    12730 3co9:B (2.1) BS01 3MS 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18487044 BindingDB: IC50=<10nM, EC50=8.5nM
    12731 3coa:C (2.2) BS01 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=128nM
    12732 3coa:C (2.2) BS02 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=128nM
    12733 3coa:F (2.2) BS01 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=128nM
    12734 3coa:F (2.2) BS02 dna ? GO:0003700 ... Q12778 18786403 PDBbind: Kd=128nM
    12735 3coh:A (2.7) BS01 83H 2.7.11.1 GO:0004672 ... O14965 18630890 PDBbind: -logKd/Ki=8.40, IC50=4nM
    12736 3coq:A (2.4) BS01 dna ? GO:0000981 ... P04386 18611375 PDBbind: Kd=24.6nM
    12737 3coq:A (2.4) BS02 dna ? GO:0000981 ... P04386 18611375 PDBbind: Kd=24.6nM
    12738 3coq:B (2.4) BS01 dna ? GO:0000981 ... P04386 18611375 PDBbind: Kd=24.6nM
    12739 3coq:B (2.4) BS02 dna ? GO:0000981 ... P04386 18611375 PDBbind: Kd=24.6nM
    12740 3cow:A (1.8) BS01 52H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=0.125uM
    PDBbind: -logKd/Ki=6.90, Kd=0.125uM
    BindingDB: Ki=270nM
    12741 3cow:B (1.8) BS01 52H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=0.125uM
    BindingDB: Ki=270nM
    12742 3coy:A (2.03) BS01 53H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=0.96uM
    PDBbind: -logKd/Ki=6.02, Kd=0.96uM
    BindingDB: Ki=300nM
    12743 3coy:B (2.03) BS01 53H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=0.96uM
    BindingDB: Ki=300nM
    12744 3coz:A (2.0) BS01 54H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=2.7uM
    PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    12745 3coz:B (2.0) BS01 54H 6.3.2.1 GO:0000287 ... P9WIL5 18821554 MOAD: Kd=2.7uM
    12746 3cp9:A (2.5) BS01 C19 2.7.10.1 GO:0004672 ... P35968 18447379 PDBbind: -logKd/Ki=7.32, IC50=0.048uM
    BindingDB: IC50=48nM
    12747 3cp9:B (2.5) BS01 C19 2.7.10.1 GO:0004672 ... P35968 18447379 BindingDB: IC50=48nM
    12748 3cpb:A (2.7) BS01 C92 2.7.10.1 GO:0004672 ... P35968 18447379 PDBbind: -logKd/Ki=4.60, IC50=25uM
    BindingDB: IC50=>25000nM
    12749 3cpb:B (2.7) BS01 C92 2.7.10.1 GO:0004672 ... P35968 18447379 BindingDB: IC50=>25000nM
    12750 3cpc:A (2.4) BS01 C52 2.7.10.1 GO:0004672 ... P35968 18447379 PDBbind: -logKd/Ki=5.30, IC50=5uM
    BindingDB: IC50=>5000nM
    12751 3cpc:B (2.4) BS01 C52 2.7.10.1 GO:0004672 ... P35968 18447379 BindingDB: IC50=>5000nM
    12752 3cph:A (2.9) BS01 GDP ? GO:0000131 ... P07560 18426803 PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    12753 3cpj:B (2.35) BS01 GDP ? GO:0000139 ... P38555 18426803 PDBbind: -logKd/Ki=4.72, Kd=18.9uM
    12754 3cqu:A (2.2) BS02 CQU 2.7.11.1 GO:0004672 ... P31749 18456494 MOAD: ic50=151nM
    PDBbind: -logKd/Ki=6.82, IC50=151nM
    BindingDB: IC50=151nM
    12755 3cqw:A (2.0) BS03 CQW 2.7.11.1 GO:0004672 ... P31749 18456494 MOAD: ic50=42nM
    PDBbind: -logKd/Ki=7.38, IC50=42nM
    12756 3cr4:X (2.15) BS01 PNT ? GO:0005509 ... P02638 18602402 MOAD: Kd=53uM
    PDBbind: -logKd/Ki=4.28, Kd=53uM
    12757 3cr4:X (2.15) BS02 PNT ? GO:0005509 ... P02638 18602402 MOAD: Kd=53uM
    PDBbind: -logKd/Ki=4.28, Kd=53uM
    12758 3cr5:X (1.85) BS01 PNT ? GO:0005509 ... P02638 18602402 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    12759 3cr5:X (1.85) BS02 PNT ? GO:0005509 ... P02638 18602402 MOAD: Kd=64uM
    PDBbind: -logKd/Ki=4.19, Kd=64uM
    12760 3crz:A (1.9) BS01 NAP 1.18.1.2 GO:0000166 ... Q9HYK7 18605699 MOAD: Kd=24uM
    12761 3cs7:A (2.2) BS02 LG0 3.4.21.6 GO:0004252 ... P00742 18550370 MOAD: Ki=0.021nM
    PDBbind: -logKd/Ki=10.68, Ki=21pM
    BindingDB: Ki=0.021nM
    12762 3cs8:A (2.3) BS02 BRL ? GO:0003677 ... P37231 18469005 BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    12763 3cs9:A (2.21) BS01 NIL 2.7.10.2 GO:0004672 ... P00519 15710326 MOAD: ic50<33uM
    BindingDB: Kd=10nM, IC50=20nM, Ki=1nM
    12764 3cs9:B (2.21) BS01 NIL 2.7.10.2 GO:0004672 ... P00519 15710326 MOAD: ic50<33uM
    BindingDB: Kd=10nM, IC50=20nM, Ki=1nM
    12765 3cs9:C (2.21) BS01 NIL 2.7.10.2 GO:0004672 ... P00519 15710326 MOAD: ic50<33uM
    BindingDB: Kd=10nM, IC50=20nM, Ki=1nM
    12766 3cs9:D (2.21) BS01 NIL 2.7.10.2 GO:0004672 ... P00519 15710326 MOAD: ic50<33uM
    BindingDB: Kd=10nM, IC50=20nM, Ki=1nM
    12767 3cse:A (1.6) BS02 N22 1.5.1.3 GO:0000166 ... Q6FPH0 18804036 MOAD: ic50=8.2nM
    BindingDB: IC50=8.2nM
    12768 3cse:B (1.6) BS02 N22 1.5.1.3 GO:0000166 ... Q6FPH0 18804036 MOAD: ic50=8.2nM
    BindingDB: IC50=8.2nM
    12769 3cso:A (2.71) BS01 XNI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 18852280 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    12770 3cst:A (3.2) BS01 E52 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 18484710 PDBbind: -logKd/Ki=7.41, IC50=0.039uM
    12771 3cth:A (2.3) BS01 319 2.7.10.1 GO:0004672 ... P08581 18479916 MOAD: ic50=0.035uM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=35nM
    12772 3ctj:A (2.5) BS01 320 2.7.10.1 GO:0004672 ... P08581 18479916 MOAD: ic50=0.11uM
    PDBbind: -logKd/Ki=7.46, IC50=0.035uM
    BindingDB: IC50=110nM
    12773 3ctq:A (1.95) BS01 337 2.7.11.24 GO:0000077 ... Q16539 18462940 MOAD: ic50=40nM
    PDBbind: -logKd/Ki=7.40, IC50=40nM
    12774 3ctr:A (2.1) BS01 MGP 3.1.13.4 GO:0003676 ... O95453 18694759 MOAD: Kd=6.94uM
    PDBbind: -logKd/Ki=5.16, Kd=6.94uM
    12775 3ctt:A (2.1) BS01 3CU 3.2.1.20 GO:0003824 ... O43451 19123216 MOAD: Ki=0.45uM
    PDBbind: -logKd/Ki=6.35, Ki=0.45uM
    12776 3cuk:A (2.49) BS02 4P5 1.4.3.3 GO:0003884 ... P14920 18455394 MOAD: ic50=141nM
    BindingDB: Ki=36nM, IC50=141nM, Kd=29nM
    12777 3cuk:B (2.49) BS02 4P5 1.4.3.3 GO:0003884 ... P14920 18455394 MOAD: ic50=141nM
    BindingDB: Ki=36nM, IC50=141nM, Kd=29nM
    12778 3cuk:C (2.49) BS02 4P5 1.4.3.3 GO:0003884 ... P14920 18455394 MOAD: ic50=141nM
    BindingDB: Ki=36nM, IC50=141nM, Kd=29nM
    12779 3cuk:D (2.49) BS02 4P5 1.4.3.3 GO:0003884 ... P14920 18455394 MOAD: ic50=141nM
    BindingDB: Ki=36nM, IC50=141nM, Kd=29nM
    12780 3cut:A (2.3) BS01 179 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=56000nM
    12781 3cuu:A (2.3) BS01 376 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=144000nM
    12782 3cuv:A (1.93) BS01 475 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=230000nM
    12783 3cuw:A (2.0) BS01 445 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=100000nM
    12784 3cuw:A (2.0) BS02 445 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=100000nM
    12785 3cv2:A (1.4) BS01 OXL 2.3.3.9 GO:0003824 ... P08997 18714089 MOAD: Ki=37uM
    12786 3cv2:B (1.4) BS01 OXL 2.3.3.9 GO:0003824 ... P08997 18714089 MOAD: Ki=37uM
    12787 3cv6:A (2.1) BS02 HXS 1.1.1.-
    1.1.1.209    		 GO:0004033 ... Q91WR5 19237748 MOAD: ic50=50uM
    12788 3cv6:B (2.1) BS02 HXS 1.1.1.-
    1.1.1.209    		 GO:0004033 ... Q91WR5 19237748 MOAD: ic50=50uM
    12789 3cv7:A (2.412) BS02 C2U 1.1.1.19
    1.1.1.2
    1.1.1.20
    1.1.1.372
    1.1.1.54
    1.6.-.-    		 GO:0004032 ... P50578 18782556 MOAD: Ki=5.9nM
    12790 3cvk:A (2.31) BS01 N34 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18722768 MOAD: ic50<0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    12791 3cvk:B (2.31) BS01 N34 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18722768 MOAD: ic50<0.01uM
    12792 3cvv:A (2.1) BS01 dna ? GO:0000166 ... Q8SXK5 19570997 PDBbind: Kd=8.6uM
    12793 3cvv:A (2.1) BS02 dna ? GO:0000166 ... Q8SXK5 19570997 PDBbind: Kd=8.6uM
    12794 3cwd:A (2.4) BS03 LNB ? GO:0003677 ... P37231 18604218 BindingDB: IC50=410nM, EC50=45nM
    12795 3cwd:B (2.4) BS03 LNB ? GO:0003677 ... P37231 18604218 BindingDB: IC50=410nM, EC50=45nM
    12796 3cwe:A (1.6) BS01 825 3.1.3.48 GO:0004725 ... P18031 18477508 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM, EC50=1200nM
    12797 3cwj:A (2.4) BS01 321 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18662878 MOAD: ic50<0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=<10nM, EC50=11nM
    12798 3cwj:B (2.4) BS01 321 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18662878 MOAD: ic50<0.01uM
    BindingDB: IC50=<10nM, EC50=11nM
    12799 3cwk:A (1.6) BS01 REA ? GO:0001972 ... P29373 19018099 MOAD: Kd=250nM
    PDBbind: -logKd/Ki=6.60, Kd=250nM
    12800 3cx9:A (2.8) BS01 LPX ? GO:0003677 ... P02768 19601929 PDBbind: -logKd/Ki=4.89, Kd=12.9uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417