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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11801 3apc:A (2.544) BS01 MMD 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21316229 PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    BindingDB: IC50=36nM
    11802 3aqa:A (2.3) BS01 BYH ? N/A P25440 21513886 PDBbind: -logKd/Ki=4.55, Kd=28uM
    BindingDB: Kd=28000nM, IC50=28000nM
    11803 3aqt:A (2.5) BS01 RCO ? GO:0000976 ... Q8NR95 21559286 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    11804 3aqt:B (2.5) BS01 RCO ? GO:0000976 ... Q8NR95 21559286 MOAD: Kd=0.19uM
    11805 3ar3:A (2.3) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11806 3ar4:A (2.15) BS01 ATP 7.2.2.10 GO:0000166 ... P04191 21239683 MOAD: Kd=156nM
    11807 3ar4:A (2.15) BS03 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11808 3ar5:A (2.2) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11809 3ar5:A (2.2) BS02 TM1 7.2.2.10 GO:0000166 ... P04191 21239683 MOAD: Kd=7.62nM
    11810 3ar6:A (2.2) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11811 3ar7:A (2.15) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11812 3ar8:A (2.6) BS04 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11813 3ar9:A (2.6) BS04 TG1 7.2.2.10 GO:0000166 ... P04191 21239683 BindingDB: Kd=0.200000nM, IC50=0.2nM
    11814 3ara:A (1.7) BS01 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    11815 3ara:A (1.7) BS02 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    11816 3ara:B (1.7) BS01 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    BindingDB: IC50=480nM
    11817 3ara:B (1.7) BS02 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    BindingDB: IC50=480nM
    11818 3ara:C (1.7) BS01 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    11819 3ara:C (1.7) BS02 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    11820 3arb:A (2.7) BS01 FEE ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.63, Kd=234nM
    11821 3arb:C (2.7) BS01 FEE ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.63, Kd=234nM
    11822 3ard:A (3.01) BS01 3GH ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.76, Kd=175nM
    11823 3ard:C (3.01) BS01 3GH ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.76, Kd=175nM
    11824 3are:A (2.8) BS01 4GH ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.21, Kd=617nM
    11825 3are:C (2.8) BS01 4GH ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.21, Kd=617nM
    11826 3arf:A (2.9) BS01 DB3 ? N/A P11609 21376639 PDBbind: -logKd/Ki=7.19, Kd=64nM
    11827 3arf:C (2.9) BS01 DB3 ? N/A P01848 21376639 PDBbind: -logKd/Ki=7.19, Kd=64nM
    11828 3arg:A (3.0) BS01 DB6 ? N/A P11609 21376639 PDBbind: -logKd/Ki=7.26, Kd=55nM
    11829 3arg:C (3.0) BS01 DB6 ? N/A P01848 21376639 PDBbind: -logKd/Ki=7.26, Kd=55nM
    11830 3arn:A (1.8) BS01 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11831 3arn:A (1.8) BS02 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11832 3arn:B (1.8) BS01 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11833 3arn:B (1.8) BS02 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11834 3arn:C (1.8) BS01 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11835 3arn:C (1.8) BS02 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    11836 3arp:A (1.55) BS01 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    11837 3arq:A (1.5) BS01 DM5 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    11838 3arr:A (1.65) BS01 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    11839 3arr:A (1.65) BS02 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    11840 3art:A (2.23) BS01 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    11841 3art:A (2.23) BS02 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    11842 3art:A (2.23) BS03 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    11843 3aru:A (1.9) BS01 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    11844 3aru:A (1.9) BS02 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    11845 3aru:A (1.9) BS03 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    11846 3arv:A (1.5) BS01 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    11847 3arv:A (1.5) BS02 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    11848 3arw:A (1.5) BS01 CTI 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    11849 3arx:A (1.16) BS01 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    11850 3arx:A (1.16) BS02 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    11851 3ary:A (1.35) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    11852 3ary:A (1.35) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    11853 3arz:A (1.82) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    11854 3arz:A (1.82) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    11855 3as0:A (2.0) BS01 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.55, Kd=28uM
    11856 3as0:A (2.0) BS02 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.55, Kd=28uM
    11857 3as1:A (2.0) BS01 CTI 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.02, IC50=95uM
    11858 3as2:A (1.8) BS01 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    11859 3as2:A (1.8) BS02 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    11860 3as2:A (1.8) BS03 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    11861 3as3:A (2.4) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.80, IC50=160uM
    11862 3as3:A (2.4) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.80, IC50=160uM
    11863 3asx:A (2.0) BS01 D99 2.5.1.21 GO:0004310 ... P37268 21353782 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    11864 3at1:A (2.8) BS01 PCT 2.1.3.2 GO:0004070 ... P0A786 2405902 PDBbind: -logKd/Ki=3.18, Ki=0.66mM
    11865 3at3:A (2.6) BS01 ATK 2.7.11.1 GO:0004672 ... P68400 21735094 PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    BindingDB: IC50=110nM
    11866 3at4:A (2.2) BS01 CCK 2.7.11.1 GO:0004672 ... P68400 21735094 MOAD: Kd=2.26nM
    PDBbind: -logKd/Ki=8.10, IC50=8.0nM
    11867 3ati:A (1.71) BS02 SZ4 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.73, IC50=188uM
    11868 3atk:A (1.74) BS02 SZ1 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.85, IC50=1400uM
    11869 3atm:A (1.72) BS02 TSS 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.06, IC50=873uM
    11870 3atp:A (2.5) BS01 SER ? GO:0006935 ... P02942 21979954 PDBbind: -logKd/Ki=4.45, Kd=35.6uM
    11871 3atp:B (2.5) BS01 SER ? GO:0006935 ... P02942 21979954 PDBbind: -logKd/Ki=4.45, Kd=35.6uM
    11872 3atu:A (1.65) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=8.30, Kd=5.00nM
    11873 3atv:A (1.58) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=5.34, Kd=4610nM
    11874 3au6:A (3.3) BS02 DG3 2.7.7.7
    4.2.99.18    		 GO:0003677 ... Q5SJ64 22306405 PDBbind: -logKd/Ki=7.92, Kd=12nM
    11875 3auj:A (2.1) BS01 GOL 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11876 3auj:A (2.1) BS02 CA 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11877 3auj:A (2.1) BS03 B12 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11878 3auj:L (2.1) BS01 GOL 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11879 3auj:L (2.1) BS02 CA 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11880 3auj:L (2.1) BS03 B12 4.2.1.28 GO:0003824 ... Q59470 22221669 Manual survey: Km=1.2+-0.2mM (22221669)
    11881 3axk:A (1.9) BS02 NDP 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=70uM
    11882 3axk:A (1.9) BS03 NDP 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=70uM
    11883 3axm:A (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    PDBbind: -logKd/Ki=5.07, Ki=8.5uM
    11884 3axm:B (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    PDBbind: -logKd/Ki=5.07, Ki=8.5uM
    11885 3axm:C (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11886 3axm:D (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11887 3axm:E (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11888 3axm:F (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11889 3axm:G (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11890 3axm:H (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    11891 3axz:A (2.25) BS01 ADN 2.1.1.228 GO:0002939 ... P43912 21602303 MOAD: Kd=372uM
    PDBbind: -logKd/Ki=3.43, Kd=372uM
    11892 3ay0:A (3.05) BS02 ADN 2.1.1.228 GO:0002939 ... Q58293 21602303 PDBbind: -logKd/Ki=3.04, Kd=910uM
    11893 3ay9:A (1.75) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=8.34, Kd=4.55nM
    11894 3aya:A (2.0) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.33, Kd=47uM
    11895 3ayc:B (1.8) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.24, Kd=57uM
    11896 3ayd:A (1.9) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.19, Kd=65uM
    11897 3ayi:A (1.25) BS02 HCI 1.13.12.9 GO:0000166 ... Q5W9R9 21841183 MOAD: Ki=13.9uM
    11898 3ayi:B (1.25) BS02 HCI 1.13.12.9 GO:0000166 ... Q5W9R9 21841183 MOAD: Ki=13.9uM
    11899 3ayk:A (-1.00) BS04 CGS 3.4.24.7 GO:0004222 ... P03956 10353819 BindingDB: Ki=33nM, IC50=15nM
    11900 3az8:C (3.1) BS01 S21 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11901 3az8:D (3.1) BS01 S21 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11902 3az9:C (2.75) BS01 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11903 3az9:C (2.75) BS02 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11904 3az9:D (2.75) BS01 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11905 3az9:D (2.75) BS02 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    11906 3aza:A (2.7) BS01 KM0 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    11907 3aza:B (2.7) BS01 KM0 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    11908 3azb:C (2.6) BS01 KM1 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=4.92, IC50=12uM
    11909 3azb:D (2.6) BS01 KM1 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=4.92, IC50=12uM
    11910 3b0r:A (2.15) BS01 GW9 ? GO:0003677 ... P37231 N/A BindingDB: EC50=2.0nM
    11911 3b0r:B (2.15) BS01 GW9 ? GO:0003677 ... P37231 N/A BindingDB: EC50=2.0nM
    11912 3b0t:A (1.3) BS01 MCZ ? GO:0003677 ... P11473 N/A BindingDB: EC50=0.855000nM
    11913 3b0w:A (2.2) BS01 DGX ? GO:0003677 ... P51449 21733845 PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM, Kd=109nM
    11914 3b0w:B (2.2) BS01 DGX ? GO:0003677 ... P51449 21733845 BindingDB: IC50=2000nM, Kd=109nM
    11915 3b1m:A (1.6) BS02 KRC ? GO:0003677 ... P37231 21720019 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    11916 3b1t:A (2.5) BS01 YCL 3.5.3.15 GO:0004668 ... Q9UM07 21882827 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    11917 3b1u:A (2.1) BS01 YFF 3.5.3.15 GO:0004668 ... Q9UM07 21882827 PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    11918 3b24:A (1.7) BS01 B2J 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.042mM
    PDBbind: -logKd/Ki=4.38, Kd=0.042mM
    BindingDB: Kd=42000nM
    11919 3b24:B (1.7) BS01 B2J 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.042mM
    BindingDB: Kd=42000nM
    11920 3b25:A (1.75) BS01 B2K 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.86uM
    PDBbind: -logKd/Ki=6.07, Kd=0.86uM
    BindingDB: Kd=8.6E2nM, IC50=9600nM
    11921 3b26:A (2.1) BS01 B2L 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    BindingDB: IC50=6900nM, Kd=2.3E2nM
    11922 3b27:A (1.5) BS01 B2T 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=6.9uM
    PDBbind: -logKd/Ki=5.16, Kd=6.9uM
    BindingDB: IC50=750nM, Kd=6.9E3nM
    11923 3b28:A (1.35) BS01 B2X 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.0034uM
    PDBbind: -logKd/Ki=8.47, Kd=0.0034uM
    BindingDB: Kd=3.4nM, IC50=3000nM
    11924 3b28:B (1.35) BS01 B2X 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.0034uM
    BindingDB: Kd=3.4nM, IC50=3000nM
    11925 3b2q:A (2.1) BS01 ATP 3.6.3.14 GO:0005524 ... Q60187 19003877 PDBbind: -logKd/Ki=4.55, Kd=28uM
    11926 3b2q:B (2.1) BS01 ATP 3.6.3.14 GO:0005524 ... Q60187 19003877 PDBbind: -logKd/Ki=4.55, Kd=28uM
    11927 3b2r:A (2.07) BS01 VDN 3.1.4.35 GO:0004114 ... O76074 17959709 BindingDB: IC50=0.890000nM, Ki=1nM
    11928 3b2r:B (2.07) BS01 VDN 3.1.4.35 GO:0004114 ... O76074 17959709 BindingDB: IC50=0.890000nM, Ki=1nM
    11929 3b2t:A (1.8) BS01 M33 2.7.10.1 GO:0004672 ... P21802 18056630 PDBbind: -logKd/Ki=5.21, Kd=6.21uM
    11930 3b2t:B (1.8) BS01 M33 2.7.10.1 GO:0004672 ... P21802 18056630 PDBbind: -logKd/Ki=5.21, Kd=6.21uM
    11931 3b2w:A (2.3) BS01 9NH 2.7.10.2 GO:0004672 ... P06239 18083554 MOAD: ic50=0.6nM
    PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    11932 3b3c:A (1.46) BS03 PLU 3.4.11.10 GO:0006508 ... Q01693 18576673 MOAD: Ki=105uM
    PDBbind: -logKd/Ki=3.98, Ki=105uM
    11933 3b3k:A (2.6) BS01 LRG ? GO:0003677 ... P37231 19053776 BindingDB: EC50=550nM
    11934 3b3m:A (1.95) BS04 JI1 1.14.13.39 GO:0004517 ... P29476 18321097 MOAD: Ki=47.94uM
    BindingDB: Ki=9400nM
    11935 3b3m:B (1.95) BS05 JI1 1.14.13.39 GO:0004517 ... P29476 18321097 MOAD: Ki=47.94uM
    BindingDB: Ki=9400nM
    11936 3b3n:A (1.98) BS04 JI2 1.14.13.39 GO:0004517 ... P29476 18321097 MOAD: Ki=388nM
    BindingDB: Ki=388nM, IC50=6300nM
    11937 3b3n:B (1.98) BS05 JI2 1.14.13.39 GO:0004517 ... P29476 18321097 MOAD: Ki=388nM
    BindingDB: Ki=388nM, IC50=6300nM
    11938 3b3o:A (2.05) BS04 JI3 1.14.13.39 GO:0004517 ... P29476 19296678 MOAD: Ki=0.085uM
    BindingDB: Ki=85nM, IC50=42000nM
    11939 3b3o:B (2.05) BS05 JI3 1.14.13.39 GO:0004517 ... P29476 19296678 MOAD: Ki=0.085uM
    BindingDB: Ki=85nM, IC50=42000nM
    11940 3b3p:A (2.45) BS04 JI7 1.14.13.39 GO:0004517 ... P29476 19296678 MOAD: Ki=0.25uM
    BindingDB: IC50=3300nM, Ki=250nM
    11941 3b3p:B (2.45) BS04 JI7 1.14.13.39 GO:0004517 ... P29476 19296678 MOAD: Ki=0.25uM
    BindingDB: IC50=3300nM, Ki=250nM
    11942 3b3s:A (1.18) BS03 LEU 3.4.11.10 GO:0006508 ... Q01693 18576673 PDBbind: -logKd/Ki=2.55, Ki=2800uM
    11943 3b3w:A (1.75) BS03 LEU 3.4.11.10 GO:0006508 ... Q01693 18576673 PDBbind: -logKd/Ki=4.19, Ki=65uM
    11944 3b3x:A (2.5) BS01 A33 3.5.2.6 GO:0005886 ... P00808 18515103 PDBbind: -logKd/Ki=3.60, Ki=250uM
    11945 3b4f:A (1.89) BS02 TUO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18024029 MOAD: Ki=7.2nM
    PDBbind: -logKd/Ki=8.14, Ki=7.2nM
    BindingDB: Ki=7.2nM
    11946 3b4p:A (1.7) BS01 3B4 ? GO:0017000 ... Q396C9 19053436 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    11947 3b4p:B (1.7) BS01 3B4 ? GO:0017000 ... Q396C9 19053436 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    11948 3b4y:A (1.95) BS01 F42 1.1.98.2 GO:0005829 ... P9WNE1 18434308 MOAD: Kd=4.5uM
    11949 3b4y:A (1.95) BS02 FLC 1.1.98.2 GO:0005829 ... P9WNE1 18434308 MOAD: ic50=43uM
    11950 3b4y:B (1.95) BS01 F42 1.1.98.2 GO:0005829 ... P9WNE1 18434308 MOAD: Kd=4.5uM
    11951 3b4y:B (1.95) BS02 FLC 1.1.98.2 GO:0005829 ... P9WNE1 18434308 MOAD: ic50=43uM
    11952 3b50:A (1.4) BS01 SLB ? GO:0030288 ... P44542 17947229 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    11953 3b5j:A (2.0) BS01 12D ? GO:0005524 ... P08716 18155559 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    11954 3b5r:A (1.8) BS01 B5R ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM
    11955 3b65:A (1.8) BS01 3B6 ? N/A P10275 18805694 PDBbind: -logKd/Ki=9.27, Ki=0.54nM
    11956 3b66:A (1.65) BS01 B66 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    11957 3b67:A (1.9) BS01 B67 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.85, Ki=1.4nM
    11958 3b68:A (1.9) BS01 B68 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: Ki=4nM
    11959 3b6h:A (1.62) BS01 MXD 4.2.1.152
    5.3.99.4    		 GO:0001516 ... Q16647 18032380 MOAD: Kd=3.4uM
    11960 3b6h:B (1.62) BS01 MXD 4.2.1.152
    5.3.99.4    		 GO:0001516 ... Q16647 18032380 MOAD: Kd=3.4uM
    11961 3b7i:A (1.75) BS03 PLU 3.4.11.10 GO:0006508 ... Q01693 18576673 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    11962 3b7i:A (1.75) BS04 LEU 3.4.11.10 GO:0006508 ... Q01693 18576673 MOAD: Ki=65uM
    11963 3b7j:A (2.4) BS01 JUG 4.2.1.59 GO:0005737 ... Q5G940 18565285 PDBbind: -logKd/Ki=5.17, Ki=6.8uM
    11964 3b7j:C (2.4) BS01 JUG 4.2.1.59 GO:0005737 ... Q5G940 18565285 MOAD: Ki=6.8uM
    11965 3b7l:A (1.95) BS04 M0N 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 N/A BindingDB: IC50=3nM
    11966 3b7r:L (1.811) BS02 BIR 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18804029 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    11967 3b7u:X (1.9) BS02 KEL 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18804029 PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: IC50=5nM, Ki=10nM
    11968 3b8i:A (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11969 3b8i:B (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11970 3b8i:C (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11971 3b8i:D (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11972 3b8i:E (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11973 3b8i:F (1.9) BS01 OXL 4.1.1.112 GO:0000287 ... Q9HUU1 18081320 MOAD: Ki=4uM
    BindingDB: Ki=43000nM
    11974 3b8q:A (2.75) BS01 900 2.7.10.1 GO:0004672 ... P35968 18324761 PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: IC50=0.480000nM
    11975 3b8q:B (2.75) BS01 900 2.7.10.1 GO:0004672 ... P35968 18324761 BindingDB: IC50=0.480000nM
    11976 3b8r:A (2.7) BS01 887 2.7.10.1 GO:0004672 ... P35968 18324759 PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    BindingDB: IC50=0.600000nM
    11977 3b8r:B (2.7) BS01 887 2.7.10.1 GO:0004672 ... P35968 18324759 BindingDB: IC50=0.600000nM
    11978 3b8z:A (1.4) BS05 294 3.4.24.- GO:0004222 ... Q9UNA0 17991750 MOAD: ic50=0.29uM
    PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    11979 3b8z:B (1.4) BS05 294 3.4.24.- GO:0004222 ... Q9UNA0 17991750 MOAD: ic50=0.29uM
    11980 3b92:A (2.0) BS02 440 3.4.24.86 GO:0004222 ... P78536 18054488 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=10nM
    11981 3b99:A (2.5) BS02 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11982 3b99:A (2.5) BS03 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11983 3b99:A (2.5) BS04 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11984 3b99:B (2.5) BS02 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11985 3b99:B (2.5) BS03 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11986 3b99:B (2.5) BS04 U51 4.2.1.152
    5.3.99.4    		 GO:0001516 ... F1RE08 18032380 MOAD: Kd=1.9uM
    11987 3b9g:A (1.4) BS02 IMH 3.2.2.1 GO:0006139 ... Q9GPQ4 18519562 MOAD: Ki=19uM
    PDBbind: -logKd/Ki=4.72, Ki=19uM
    11988 3b9g:B (1.4) BS02 IMH 3.2.2.1 GO:0006139 ... Q9GPQ4 18519562 MOAD: Ki=19uM
    11989 3b9l:A (2.6) BS01 AZZ ? GO:0003677 ... P02768 18258455 BindingDB: Kd=0.440000nM
    11990 3b9l:A (2.6) BS02 AZZ ? GO:0003677 ... P02768 18258455 BindingDB: Kd=0.440000nM
    11991 3b9m:A (2.7) BS01 AZZ ? GO:0003677 ... P02768 18258455 BindingDB: Kd=0.440000nM
    11992 3b9m:A (2.7) BS02 SAL ? GO:0003677 ... P02768 18258455 BindingDB: Ki=5888436553556nM
    11993 3b9s:A (1.8) BS01 RW1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 18794110 PDBbind: -logKd/Ki=5.30, IC50=5uM
    11994 3b9s:B (1.8) BS01 RW1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 18794110 PDBbind: -logKd/Ki=5.30, IC50=5uM
    11995 3b9s:B (1.8) BS02 RW1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 18794110 PDBbind: -logKd/Ki=5.30, IC50=5uM
    11996 3bb1:A (2.8) BS01 GNP 3.6.5.- GO:0005525 ... Q41009 18400179 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    11997 3bb1:A (2.8) BS02 GNP 3.6.5.- GO:0005525 ... Q41009 18400179 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    11998 3bb1:B (2.8) BS01 GNP 3.6.5.- GO:0005525 ... Q41009 18400179 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    11999 3bb1:B (2.8) BS02 GNP 3.6.5.- GO:0005525 ... Q41009 18400179 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    12000 3bbb:C (1.3) BS01 DA 2.7.13.3
    2.7.4.6    		 GO:0001726 ... P22392 19435876 PDBbind: -logKd/Ki=7.00, Kd=100nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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