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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7601 2hdd:A (1.9) BS02 dna ? GO:0000981 ... P02836 9309220 PDBbind: Kd=8.8pM
    7602 2hdd:B (1.9) BS01 dna ? GO:0000981 ... P02836 9309220 PDBbind: Kd=8.8pM
    7603 2hdd:B (1.9) BS02 dna ? GO:0000981 ... P02836 9309220 PDBbind: Kd=8.8pM
    7604 2hdk:B (2.4) BS02 COI 2.6.1.42 GO:0003824 ... O15382 17050531 MOAD: Kd=6.1mM
    7605 2hdq:A (2.1) BS01 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    PDBbind: -logKd/Ki=1.40, Ki=40mM
    BindingDB: Ki=40000000nM
    7606 2hdq:A (2.1) BS02 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    PDBbind: -logKd/Ki=1.40, Ki=40mM
    BindingDB: Ki=40000000nM
    7607 2hdq:A (2.1) BS03 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    PDBbind: -logKd/Ki=1.40, Ki=40mM
    BindingDB: Ki=40000000nM
    7608 2hdq:A (2.1) BS04 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    PDBbind: -logKd/Ki=1.40, Ki=40mM
    BindingDB: Ki=40000000nM
    7609 2hdq:A (2.1) BS05 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    PDBbind: -logKd/Ki=1.40, Ki=40mM
    BindingDB: Ki=40000000nM
    7610 2hdq:B (2.1) BS01 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    BindingDB: Ki=40000000nM
    7611 2hdq:B (2.1) BS02 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    BindingDB: Ki=40000000nM
    7612 2hdq:B (2.1) BS03 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    BindingDB: Ki=40000000nM
    7613 2hdq:B (2.1) BS04 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    BindingDB: Ki=40000000nM
    7614 2hdq:B (2.1) BS05 C21 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=40mM
    BindingDB: Ki=40000000nM
    7615 2hdr:A (2.2) BS01 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7616 2hdr:A (2.2) BS02 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7617 2hdr:A (2.2) BS03 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7618 2hdr:A (2.2) BS04 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7619 2hdr:A (2.2) BS05 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7620 2hdr:A (2.2) BS06 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7621 2hdr:A (2.2) BS07 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7622 2hdr:A (2.2) BS08 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    PDBbind: -logKd/Ki=1.72, Ki=19mM
    BindingDB: Ki=19000000nM
    7623 2hdr:B (2.2) BS01 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7624 2hdr:B (2.2) BS02 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7625 2hdr:B (2.2) BS03 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7626 2hdr:B (2.2) BS04 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7627 2hdr:B (2.2) BS05 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7628 2hdr:B (2.2) BS06 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7629 2hdr:B (2.2) BS07 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7630 2hdr:B (2.2) BS08 4A3 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=19mM
    BindingDB: Ki=19000000nM
    7631 2hds:A (1.16) BS02 4MB 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=10mM
    PDBbind: -logKd/Ki=2.00, Ki=10mM
    BindingDB: Ki=10000000nM
    7632 2hds:A (1.16) BS03 4MB 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=10mM
    PDBbind: -logKd/Ki=2.00, Ki=10mM
    BindingDB: Ki=10000000nM
    7633 2hds:A (1.16) BS04 4MB 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=10mM
    PDBbind: -logKd/Ki=2.00, Ki=10mM
    BindingDB: Ki=10000000nM
    7634 2hds:B (1.16) BS01 4MB 3.5.2.6 GO:0008800 ... P00811 17072304 BindingDB: Ki=10000000nM
    7635 2hds:B (1.16) BS02 4MB 3.5.2.6 GO:0008800 ... P00811 17072304 BindingDB: Ki=10000000nM
    7636 2hdu:A (1.49) BS01 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7637 2hdu:A (1.49) BS02 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7638 2hdu:A (1.49) BS03 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7639 2hdu:B (1.49) BS01 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7640 2hdu:B (1.49) BS02 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7641 2hdu:B (1.49) BS03 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7642 2hdu:B (1.49) BS04 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7643 2hdu:B (1.49) BS05 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7644 2hdu:B (1.49) BS06 F12 3.5.2.6 GO:0008800 ... P00811 17072304 MOAD: Ki=5mM
    BindingDB: Ki=5000000nM
    7645 2hf8:A (2.1) BS04 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    PDBbind: -logKd/Ki=5.47, Kd=3.4uM
    7646 2hf8:B (2.1) BS01 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    PDBbind: -logKd/Ki=5.47, Kd=3.4uM
    7647 2hf8:B (2.1) BS05 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    PDBbind: -logKd/Ki=5.47, Kd=3.4uM
    7648 2hf9:A (1.9) BS03 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    7649 2hf9:B (1.9) BS01 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    7650 2hf9:B (1.9) BS04 GSP ? GO:0003924 ... Q57884 16807243 MOAD: Kd=3.4uM
    7651 2hfp:A (2.0) BS02 NSI ? GO:0003677 ... P37231 16919947 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    7652 2hfp:A (2.0) BS03 NSI ? GO:0003677 ... P37231 16919947 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    7653 2hgh:A (-1.00) BS01 rna ? N/A P03001 16405997 PDBbind: Kd=8nM
    7654 2hh5:A (1.8) BS03 GNQ 3.4.22.27 GO:0006508 ... P25774 16876402 MOAD: Ki=0.032uM
    BindingDB: Ki=32nM
    7655 2hh5:B (1.8) BS04 GNQ 3.4.22.27 GO:0006508 ... P25774 16876402 MOAD: Ki=0.032uM
    PDBbind: -logKd/Ki=7.49, Ki=0.032uM
    BindingDB: Ki=32nM
    7656 2hh5:B (1.8) BS05 GNQ 3.4.22.27 GO:0006508 ... P25774 16876402 MOAD: Ki=0.032uM
    PDBbind: -logKd/Ki=7.49, Ki=0.032uM
    BindingDB: Ki=32nM
    7657 2hha:A (2.35) BS01 3TP 3.4.14.5 GO:0001618 ... P27487 16919457 MOAD: ic50=0.122uM
    PDBbind: -logKd/Ki=6.91, IC50=0.122uM
    BindingDB: IC50=122nM
    7658 2hha:B (2.35) BS01 3TP 3.4.14.5 GO:0001618 ... P27487 16919457 MOAD: ic50=0.122uM
    BindingDB: IC50=122nM
    7659 2hhn:B (1.55) BS01 GNQ 3.4.22.27 GO:0006508 ... P25774 16876402 MOAD: Ki=32nM
    PDBbind: -logKd/Ki=7.49, Ki=32nM
    BindingDB: Ki=32nM
    7660 2hhu:A (1.8) BS01 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=1.1mM
    7661 2hhu:A (1.8) BS02 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=1.1mM
    7662 2hi4:A (1.95) BS02 BHF 1.14.14.1
    4.2.1.152    		 GO:0004497 ... P05177 17311915 MOAD: Ki=25nM
    BindingDB: IC50=30nM
    7663 2hiw:A (2.2) BS01 7MP 2.7.10.2 GO:0004672 ... P00519 16873026 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    7664 2hiw:B (2.2) BS01 7MP 2.7.10.2 GO:0004672 ... P00519 16873026 MOAD: ic50=8nM
    7665 2hiz:A (2.5) BS01 LIJ 3.4.23.46 GO:0004190 ... P56817 17046251 MOAD: ic50=112nM
    PDBbind: -logKd/Ki=6.95, IC50=112nM
    7666 2hiz:B (2.5) BS01 LIJ 3.4.23.46 GO:0004190 ... P56817 17046251 MOAD: ic50=112nM
    7667 2hiz:C (2.5) BS01 LIJ 3.4.23.46 GO:0004190 ... P56817 17046251 MOAD: ic50=112nM
    7668 2hj4:A (1.8) BS01 PNZ 1.4.9.2 GO:0016491 ... P84888 17636875 MOAD: Kd=4.29uM
    7669 2hj4:A (1.8) BS02 PNZ 1.4.9.2 GO:0016491 ... P84888 17636875 MOAD: Kd=4.29uM
    7670 2hj4:B (1.8) BS01 PNZ 1.4.9.2 GO:0016491 ... P84888 17636875 PDBbind: -logKd/Ki=5.37, Kd=4.29uM
    7671 2hj4:B (1.8) BS02 PNZ 1.4.9.2 GO:0016491 ... P84888 17636875 PDBbind: -logKd/Ki=5.37, Kd=4.29uM
    7672 2hj4:D (1.8) BS01 PNZ 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd=4.29uM
    PDBbind: -logKd/Ki=5.37, Kd=4.29uM
    7673 2hj4:D (1.8) BS02 PNZ 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd=4.29uM
    PDBbind: -logKd/Ki=5.37, Kd=4.29uM
    7674 2hj4:H (1.8) BS01 PNZ 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd=4.29uM
    7675 2hj4:H (1.8) BS02 PNZ 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd=4.29uM
    7676 2hjb:A (1.85) BS01 PZM 1.4.9.2 GO:0016491 ... P84888 17636875 MOAD: Kd=40.3uM
    7677 2hjb:D (1.85) BS01 PZM 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd=40.3uM
    7678 2hjh:A (1.85) BS03 NCA 2.3.1.286 GO:0070403 ... P06700 N/A BindingDB: IC50=<50000nM
    7679 2hjh:B (1.85) BS03 NCA 2.3.1.286 GO:0070403 ... P06700 N/A BindingDB: IC50=<50000nM
    7680 2hk5:A (2.0) BS01 1BM 2.7.10.2 GO:0004672 ... P08631 16997556 MOAD: ic50=46nM
    PDBbind: -logKd/Ki=7.34, IC50=46nM
    BindingDB: IC50=46nM
    7681 2hkk:A (1.9) BS02 ALE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17127057 MOAD: Ka=96M^-1
    7682 2hl4:A (1.55) BS02 BO1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17251017 MOAD: Ki=23nM
    PDBbind: -logKd/Ki=7.64, Ki=23nM
    BindingDB: Ki=23nM
    7683 2hm1:A (2.2) BS01 LIQ 3.4.23.46 GO:0004190 ... P56817 17049233 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    7684 2hmu:A (2.25) BS01 ATP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7685 2hmu:B (2.25) BS01 ATP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7686 2hmv:A (2.2) BS01 ADP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7687 2hmv:B (2.2) BS01 ADP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7688 2hmw:A (3.0) BS01 ATP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7689 2hmw:B (3.0) BS01 ATP ? GO:0006813 ... O32080 16990138 PDBbind: -logKd/Ki=7.70, Kd=20nM
    7690 2hnc:A (1.55) BS02 1SA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17000110 MOAD: Ki=60nM
    PDBbind: -logKd/Ki=7.22, Ki=60nM
    BindingDB: Ki=60nM, IC50=2900nM
    7691 2hoc:A (2.1) BS02 1CN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17000110 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: Ki=0.3nM
    7692 2hoc:A (2.1) BS03 1CN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17000110 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: Ki=0.3nM
    7693 2hof:A (2.4) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7694 2hof:A (2.4) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7695 2hof:B (2.4) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7696 2hof:B (2.4) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7697 2hog:A (1.9) BS01 710 2.7.11.1 GO:0000077 ... O14757 16978863 MOAD: ic50=0.3nM
    PDBbind: -logKd/Ki=9.52, IC50=0.3nM
    7698 2hoi:A (2.601) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7699 2hoi:A (2.601) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7700 2hoi:B (2.601) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7701 2hoi:B (2.601) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7702 2hoi:G (2.601) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7703 2hoi:G (2.601) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7704 2hoi:H (2.601) BS01 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7705 2hoi:H (2.601) BS02 dna ? GO:0003677 ... P06956 17573343 PDBbind: Kd=8.9nM
    7706 2hos:A (1.9) BS01 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=5.8nM
    7707 2hos:A (1.9) BS02 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=5.8nM
    7708 2hos:B (1.9) BS01 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=5.8nM
    7709 2hos:B (1.9) BS02 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=5.8nM
    7710 2hot:A (2.19) BS01 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=1.5nM
    7711 2hot:A (2.19) BS02 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=1.5nM
    7712 2hot:B (2.19) BS01 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=1.5nM
    7713 2hot:B (2.19) BS02 dna ? GO:0003677 ... P02836 17240973 PDBbind: Kd=1.5nM
    7714 2hpa:A (2.9) BS01 PT3 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 9804805 PDBbind: -logKd/Ki=4.60, Ki=25uM
    7715 2hpp:H (3.3) BS01 0G7 3.4.21.5 GO:0004252 ... P00734 8387813 BindingDB: IC50=1.5nM
    7716 2hpq:H (3.3) BS01 0G7 3.4.21.5 GO:0004252 ... P00734 8387813 BindingDB: IC50=1.5nM
    7717 2hqu:A (2.2) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7718 2hqu:A (2.2) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7719 2hqu:A (2.2) BS03 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7720 2hqu:B (2.2) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7721 2hqu:B (2.2) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7722 2hqu:B (2.2) BS03 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7723 2hqu:C (2.2) BS01 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7724 2hqu:C (2.2) BS02 DUP 3.6.1.23 GO:0000287 ... P33316 17880943 MOAD: Kd=7.2uM
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    7725 2hr1:A (1.96) BS01 dna 2.1.1.37 GO:0003677 ... P05102 16926025 PDBbind: Kd=190pM
    7726 2hr1:A (1.96) BS02 dna 2.1.1.37 GO:0003677 ... P05102 16926025 PDBbind: Kd=190pM
    7727 2hrm:A (1.7) BS01 UC5 3.6.1.23 GO:0000287 ... P06968 17932923 MOAD: Kd=278.5uM
    PDBbind: -logKd/Ki=3.56, Kd=278.5uM
    7728 2hs1:A (0.84) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    7729 2hs1:B (0.84) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    7730 2hs1:B (0.84) BS02 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    7731 2hs2:A (1.22) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    7732 2hs2:B (1.22) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    7733 2hs2:B (1.22) BS02 017 3.4.23.16 GO:0004190 ... Q7SSI0 16962136 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    7734 2ht0:A (2.0) BS01 dna ? GO:0000976 ... P0A6X7 17097674 PDBbind: Kd=0.5nM
    7735 2ht0:A (2.0) BS02 dna ? GO:0000976 ... P0A6X7 17097674 PDBbind: Kd=0.5nM
    7736 2ht0:A (2.0) BS03 dna ? GO:0000976 ... P0A6X7 17097674 PDBbind: Kd=0.5nM
    7737 2ht0:B (2.0) BS01 dna ? GO:0003677 ... Q14F22 17097674 PDBbind: Kd=0.5nM
    7738 2ht0:B (2.0) BS02 dna ? GO:0003677 ... Q14F22 17097674 PDBbind: Kd=0.5nM
    7739 2ht0:B (2.0) BS03 dna ? GO:0003677 ... Q14F22 17097674 PDBbind: Kd=0.5nM
    7740 2ht7:A (2.6) BS01 G39 3.2.1.18 GO:0004308 ... Q07599 16915235 BindingDB: IC50=8.9nM
    7741 2ht8:A (2.4) BS01 G39 3.2.1.18 GO:0004308 ... Q07599 16915235 BindingDB: IC50=8.9nM
    7742 2htq:A (2.2) BS01 ZMR 3.2.1.18 GO:0004308 ... Q07599 16915235 BindingDB: IC50=7.4nM
    7743 2hu6:A (1.32) BS06 37A 3.4.24.65 GO:0004222 ... P39900 16899369 MOAD: Kd=154uM
    PDBbind: -logKd/Ki=3.81, Kd=154uM
    BindingDB: IC50=149000nM, Kd=154000nM
    7744 2huw:A (1.9) BS01 YVN ? N/A P62993 17001728 MOAD: Ka=1000000M^-1
    7745 2huw:B (1.9) BS01 YVN ? N/A P62993 17001728 MOAD: Ka=1000000M^-1
    7746 2hv5:A (1.59) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    7747 2hvc:A (2.1) BS01 LGD ? N/A P10275 17077481 PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    BindingDB: Ki=4.6nM, EC50=0.2nM
    7748 2hvh:A (2.492) BS01 dna 2.7.7.7 GO:0003676 ... Q45458 17179038 PDBbind: Kd=17.9uM
    7749 2hvh:A (2.492) BS02 dna 2.7.7.7 GO:0003676 ... Q45458 17179038 PDBbind: Kd=17.9uM
    7750 2hvh:D (2.492) BS01 dna 2.7.7.7 GO:0003676 ... Q45458 17179038 PDBbind: Kd=17.9uM
    7751 2hvh:D (2.492) BS02 dna 2.7.7.7 GO:0003676 ... Q45458 17179038 PDBbind: Kd=17.9uM
    7752 2hvi:A (1.98) BS01 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=17.9uM
    7753 2hvi:A (1.98) BS02 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=17.9uM
    7754 2hvi:D (1.98) BS01 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=17.9uM
    7755 2hvi:D (1.98) BS02 dna 2.7.7.7 GO:0003676 ... Q5KWC1 17179038 PDBbind: Kd=17.9uM
    7756 2hvn:A (1.58) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    7757 2hvo:A (1.65) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    7758 2hvx:A (2.6) BS01 DRX 3.4.21.39 GO:0002003 ... P23946 17361995 PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: Ki=36nM, IC50=29nM
    7759 2hw2:A (1.45) BS03 RFP 2.4.2.30 GO:0016740 ... A0QRS5 18349144 MOAD: Ki=1.07mM
    PDBbind: -logKd/Ki=2.97, Ki=1.07mM
    7760 2hwh:A (2.3) BS01 RNA 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16934455 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    7761 2hwh:B (2.3) BS01 RNA 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16934455 MOAD: ic50=2uM
    7762 2hwi:A (2.0) BS01 VRX 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16934455 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3.0uM
    7763 2hwi:B (2.0) BS01 VRX 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16934455 MOAD: ic50=3uM
    7764 2hwo:A (2.5) BS01 RBS 2.7.10.2 GO:0004672 ... P00523 17334377 PDBbind: -logKd/Ki=6.90, IC50=0.126uM
    7765 2hwp:A (2.48) BS01 DJK 2.7.10.2 GO:0004672 ... P00523 17334377 PDBbind: -logKd/Ki=7.14, IC50=0.073uM
    BindingDB: IC50=>27000nM
    7766 2hwp:B (2.48) BS01 DJK 2.7.10.2 GO:0004672 ... P00523 17334377 BindingDB: IC50=>27000nM
    7767 2hwq:A (1.97) BS01 DRY ? GO:0003677 ... P37231 17034149 BindingDB: EC50=2210nM
    7768 2hwr:A (2.34) BS01 DRD ? GO:0003677 ... P37231 17034149 BindingDB: EC50=210nM
    7769 2hx2:A (1.95) BS04 3HX 1.14.13.39 GO:0004517 ... P29473 17425297 MOAD: Ki=73uM
    7770 2hx2:B (1.95) BS05 3HX 1.14.13.39 GO:0004517 ... P29473 17425297 MOAD: Ki=73uM
    7771 2hx3:A (2.0) BS04 3HX 1.14.13.39 GO:0004517 ... P29476 17425297 MOAD: Ki=0.12uM
    7772 2hx3:B (2.0) BS05 3HX 1.14.13.39 GO:0004517 ... P29476 17425297 MOAD: Ki=0.12uM
    7773 2hx4:A (2.15) BS04 4HX 1.14.13.39 GO:0004517 ... P29476 17425297 MOAD: Ki=0.31uM
    7774 2hx4:B (2.15) BS05 4HX 1.14.13.39 GO:0004517 ... P29476 17425297 MOAD: Ki=0.31uM
    7775 2hxf:B (10.0) BS02 TA1 ? GO:0000226 ... P02554 16946706 BindingDB: EC50=520nM
    7776 2hxh:B (11.0) BS02 TA1 ? GO:0000226 ... P02554 16946706 BindingDB: EC50=520nM
    7777 2hxl:A (1.8) BS01 422 2.7.11.1 GO:0000077 ... O14757 16990002 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    7778 2hxm:A (1.3) BS01 302 3.2.2.27 GO:0004844 ... P13051 17062624 PDBbind: -logKd/Ki=5.22, Ki=6uM
    7779 2hxq:A (2.0) BS01 373 2.7.11.1 GO:0000077 ... O14757 16990002 MOAD: ic50=144nM
    PDBbind: -logKd/Ki=6.84, IC50=144nM
    BindingDB: IC50=140nM
    7780 2hy0:A (1.7) BS01 306 2.7.11.1 GO:0000077 ... O14757 16990002 MOAD: ic50=0.65nM
    PDBbind: -logKd/Ki=9.19, IC50=0.65nM
    BindingDB: IC50=0.650000nM, EC50=97nM
    7781 2hyy:A (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=170nM
    PDBbind: -logKd/Ki=6.77, IC50=170nM
    BindingDB: IC50=38nM, Kd=44nM, Ki=13nM, EC50=7e+1nM
    7782 2hyy:B (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=170nM
    BindingDB: IC50=38nM, Kd=44nM, Ki=13nM, EC50=7e+1nM
    7783 2hyy:C (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=170nM
    BindingDB: IC50=38nM, Kd=44nM, Ki=13nM, EC50=7e+1nM
    7784 2hyy:D (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=170nM
    BindingDB: IC50=38nM, Kd=44nM, Ki=13nM, EC50=7e+1nM
    7785 2hz0:A (2.1) BS01 GIN 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=330nM
    PDBbind: -logKd/Ki=6.48, IC50=330nM
    7786 2hz0:B (2.1) BS01 GIN 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=330nM
    7787 2hz4:A (2.8) BS01 4ST 2.7.10.2 GO:0004672 ... P00519 17164530 PDBbind: -logKd/Ki=5.47, IC50=3425nM
    7788 2hz4:A (2.8) BS02 4ST 2.7.10.2 GO:0004672 ... P00519 17164530 PDBbind: -logKd/Ki=5.47, IC50=3425nM
    7789 2hzi:A (1.7) BS01 JIN 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    7790 2hzi:B (1.7) BS01 JIN 2.7.10.2 GO:0004672 ... P00519 17164530 MOAD: ic50=70nM
    7791 2hzl:A (1.4) BS02 PYR ? GO:0015849 ... Q3J1R2 17362499 MOAD: Kd=270nM
    PDBbind: -logKd/Ki=6.57, Kd=270nM
    7792 2hzl:B (1.4) BS02 PYR ? GO:0015849 ... Q3J1R2 17362499 MOAD: Kd=270nM
    7793 2hzl:B (1.4) BS03 PYR ? GO:0015849 ... Q3J1R2 17362499 MOAD: Kd=270nM
    7794 2hzn:A (2.7) BS01 KIN 2.7.10.2 GO:0004672 ... P00520 17164530 PDBbind: -logKd/Ki=7.39, IC50=41nM
    7795 2hzq:A (1.8) BS01 STR ? GO:0000302 ... P05090 17699160 MOAD: Kd~1uM
    7796 2i03:B (2.4) BS01 AXD 3.4.14.5 GO:0001618 ... P27487 17034148 PDBbind: -logKd/Ki=9.00, Ki=1.0nM
    7797 2i0a:A (1.8) BS01 MUI ? GO:0004190 ... O38723 17149864 MOAD: Ki=0.004nM
    PDBbind: -logKd/Ki=11.40, Ki=4pM
    7798 2i0a:B (1.8) BS01 MUI ? GO:0004190 ... O38723 17149864 PDBbind: -logKd/Ki=11.40, Ki=4pM
    7799 2i0d:A (1.95) BS01 MUT ? GO:0004190 ... O38731 17149864 MOAD: Ki=0.0008nM
    PDBbind: -logKd/Ki=12.10, Ki=0.8pM
    7800 2i0d:B (1.95) BS01 MUT ? GO:0004190 ... O38731 17149864 PDBbind: -logKd/Ki=12.10, Ki=0.8pM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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