Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 1z9g:E (1.7) BS06 RRT 3.4.24.27 GO:0004222 ... P00800 2719912 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    BindingDB: Ki=2300nM
    5602 1z9h:A (2.6) BS01 IMN 5.3.99.3 GO:0050220 ... Q9N0A4 15854652 PDBbind: -logKd/Ki=3.00, IC50=1mM
    5603 1z9y:A (1.66) BS02 FUN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.19, Ki=65nM
    BindingDB: Ki=6.5e+4nM
    5604 1zaf:A (2.2) BS02 789 ? N/A Q92731 15876535 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    5605 1zaf:B (2.2) BS02 789 ? N/A Q92731 15876535 MOAD: ic50=20nM
    BindingDB: IC50=20nM
    5606 1zaj:A (1.89) BS01 M2P 4.1.2.13 GO:0004332 ... P00883 15870069 PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    5607 1zaj:B (1.89) BS01 M2P 4.1.2.13 GO:0004332 ... P00883 15870069 BindingDB: IC50=8000nM
    5608 1zaj:C (1.89) BS01 M2P 4.1.2.13 GO:0004332 ... P00883 15870069 BindingDB: IC50=8000nM
    5609 1zaj:D (1.89) BS01 M2P 4.1.2.13 GO:0004332 ... P00883 15870069 BindingDB: IC50=8000nM
    5610 1zap:A (2.5) BS01 A70 3.4.23.24 GO:0004190 ... P0CS83 8845753 MOAD: Ki=0.17nM
    5611 1zc9:A (2.0) BS01 PMP 4.1.1.64 GO:0008453 ... P16932 16342932 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    5612 1zd2:P (3.0) BS02 NC3 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 16322563 PDBbind: -logKd/Ki=3.30, IC50>500uM
    BindingDB: IC50=>500000nM
    5613 1zd3:A (2.3) BS02 NC4 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 16322563 MOAD: ic50>500uM
    PDBbind: -logKd/Ki=3.30, IC50>500uM
    BindingDB: IC50=36000nM
    5614 1zd4:A (2.7) BS02 NC6 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 16322563 PDBbind: -logKd/Ki=3.60, IC50=253uM
    BindingDB: IC50=>100000nM
    5615 1zd5:A (2.6) BS02 NC7 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 16322563 PDBbind: -logKd/Ki=4.87, IC50=13.4uM
    5616 1zdp:E (1.7) BS06 TIO 3.4.24.27 GO:0004222 ... P00800 2719912 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    BindingDB: Ki=1800nM, IC50=9500nM
    5617 1zdq:A (1.8) BS03 MSM 1.7.2.1 GO:0005507 ... P38501 16574144 MOAD: Kd=21.4mM
    5618 1zdq:B (1.8) BS03 MSM 1.7.2.1 GO:0005507 ... P38501 16574144 MOAD: Kd=21.4mM
    5619 1zdq:C (1.8) BS03 MSM 1.7.2.1 GO:0005507 ... P38501 16574144 MOAD: Kd=21.4mM
    5620 1ze8:A (2.0) BS03 PIU 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16134940 MOAD: Ki=21nM
    PDBbind: -logKd/Ki=7.68, Ki=21nM
    BindingDB: Ki=21nM
    5621 1zeo:A (2.5) BS01 C01 ? GO:0003677 ... P37231 15974597 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    5622 1zfk:A (1.56) BS02 NR2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.92, Ki=12nM
    BindingDB: Ki=12nM
    5623 1zfk:A (1.56) BS03 NR2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.92, Ki=12nM
    BindingDB: Ki=12nM
    5624 1zfq:A (1.55) BS02 ZEC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.52, Ki=30nM
    BindingDB: Ki=30nM, IC50=4nM
    5625 1zfq:A (1.55) BS03 ZEC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.52, Ki=30nM
    BindingDB: Ki=30nM, IC50=4nM
    5626 1zg1:A (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5627 1zg1:A (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5628 1zg1:B (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5629 1zg1:B (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5630 1zg1:E (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5631 1zg1:E (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5632 1zg1:F (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5633 1zg1:F (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.45uM
    5634 1zg5:A (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5635 1zg5:A (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5636 1zg5:B (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5637 1zg5:B (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5638 1zg5:E (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5639 1zg5:E (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5640 1zg5:F (2.3) BS01 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5641 1zg5:F (2.3) BS02 dna ? GO:0003677 ... P0AF28 16262254 PDBbind: Kd=0.38uM
    5642 1zgb:A (2.3) BS01 A1E 3.1.1.7 GO:0001507 ... P04058 16076210 MOAD: ic50=8.8nM
    PDBbind: -logKd/Ki=8.06, IC50=8.8nM
    5643 1zgc:A (2.1) BS01 A2E 3.1.1.7 GO:0001507 ... P04058 16076210 MOAD: ic50=38.8nM
    5644 1zgc:B (2.1) BS01 A2E 3.1.1.7 GO:0001507 ... P04058 16076210 MOAD: ic50=38.8nM
    5645 1zge:A (1.65) BS02 SDA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.30, Ki=50nM
    BindingDB: Ki=50nM
    5646 1zgi:A (2.2) BS02 382 3.4.21.5 GO:0004252 ... P00734 16137886 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4.6nM
    5647 1zgv:A (2.2) BS02 501 3.4.21.5 GO:0004252 ... P00734 16137886 MOAD: ic50~1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1000nM
    5648 1zgy:A (1.8) BS02 BRL ? GO:0003677 ... P37231 15976031 MOAD: ic50=0.5uM
    BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    5649 1zh5:A (1.85) BS01 rna ? GO:0003676 ... P05455 16387655 PDBbind: Kd=7nM
    5650 1zh5:A (1.85) BS02 rna ? GO:0003676 ... P05455 16387655 PDBbind: Kd=7nM
    5651 1zh5:B (1.85) BS01 rna ? GO:0003676 ... P05455 16387655 PDBbind: Kd=7nM
    5652 1zh5:B (1.85) BS02 rna ? GO:0003676 ... P05455 16387655 PDBbind: Kd=7nM
    5653 1zha:A (1.74) BS02 PEP 2.5.1.55 GO:0005737 ... O66496 16156656 MOAD: Kd=0.04uM
    5654 1zha:B (1.74) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 16156656 MOAD: Kd=0.04uM
    5655 1zho:A (2.6) BS01 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5656 1zho:A (2.6) BS02 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5657 1zho:C (2.6) BS01 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5658 1zho:C (2.6) BS02 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5659 1zho:E (2.6) BS01 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5660 1zho:G (2.6) BS01 rna ? GO:0000049 ... P27150 16330048 PDBbind: Kd=16.5nM
    5661 1zhx:A (1.5) BS01 HC3 ? GO:0000139 ... P35844 16136145 MOAD: Kd=55nM
    5662 1zhy:A (1.6) BS01 CLR ? GO:0000139 ... P35844 16136145 MOAD: Kd=300nM
    PDBbind: -logKd/Ki=6.52, Kd=300nM
    5663 1zj7:A (1.93) BS01 0ZT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 16970402 MOAD: Ki=86nM
    5664 1zjm:A (2.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=14nM
    5665 1zjm:A (2.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=14nM
    5666 1zjm:A (2.1) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=14nM
    5667 1zjn:A (2.61) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=0.3nM
    5668 1zjn:A (2.61) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=0.3nM
    5669 1zjn:A (2.61) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 16084394 PDBbind: Kd=0.3nM
    5670 1zkl:A (1.67) BS02 IBM 3.1.4.53 GO:0004114 ... Q13946 15994308 MOAD: ic50=8.1uM
    PDBbind: -logKd/Ki=5.09, IC50=8.1uM
    BindingDB: IC50=85600nM, Ki=4000nM
    5671 1zkn:A (2.1) BS02 IBM 3.1.4.53 GO:0004114 ... Q08499 14668322 PDBbind: -logKd/Ki=4.51, IC50=31uM
    BindingDB: IC50=31000nM
    5672 1zkn:B (2.1) BS02 IBM 3.1.4.53 GO:0004114 ... Q08499 14668322 BindingDB: IC50=31000nM
    5673 1zkn:C (2.1) BS02 IBM 3.1.4.53 GO:0004114 ... Q08499 14668322 BindingDB: IC50=31000nM
    5674 1zkn:D (2.1) BS02 IBM 3.1.4.53 GO:0004114 ... Q08499 14668322 BindingDB: IC50=31000nM
    5675 1zky:A (2.25) BS02 689 ? N/A P03372 16648639 MOAD: Ki=560nM
    PDBbind: -logKd/Ki=6.25, Ki=560nM
    5676 1zky:B (2.25) BS02 689 ? N/A P03372 16648639 MOAD: Ki=560nM
    5677 1zlf:B (2.3) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 16970402 MOAD: Ki=1000nM
    5678 1zm7:A (2.2) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 16008571 MOAD: ic50>1000uM
    PDBbind: -logKd/Ki=3.00, IC50>1000uM
    5679 1zm7:B (2.2) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 16008571 MOAD: ic50>1000uM
    5680 1zm7:C (2.2) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 16008571 MOAD: ic50>1000uM
    5681 1zm7:D (2.2) BS02 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 16008571 MOAD: ic50>1000uM
    5682 1zoa:A (1.74) BS02 140 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 21875028 MOAD: Kd=45nM
    BindingDB: Kd=82nM
    5683 1zoa:B (1.74) BS02 140 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 21875028 MOAD: Kd=45nM
    BindingDB: Kd=82nM
    5684 1zoe:A (1.77) BS01 K25 2.7.11.1 GO:0004672 ... P28523 16298300 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=40nM
    5685 1zog:A (2.3) BS01 K37 2.7.11.1 GO:0004672 ... P28523 16298300 MOAD: Ki=0.07uM
    PDBbind: -logKd/Ki=7.15, Ki=70nM
    5686 1zog:A (2.3) BS02 K37 2.7.11.1 GO:0004672 ... P28523 16298300 MOAD: Ki=0.07uM
    PDBbind: -logKd/Ki=7.15, Ki=70nM
    5687 1zoh:A (1.81) BS01 K44 2.7.11.1 GO:0004672 ... P28523 16298300 MOAD: Ki=0.1uM
    PDBbind: -logKd/Ki=7.00, Ki=100nM
    5688 1zom:A (2.25) BS01 339 3.4.21.27 GO:0004252 ... P03951 17181160 PDBbind: -logKd/Ki=7.52, IC50=30nM
    5689 1zos:A (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5690 1zos:B (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5691 1zos:C (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5692 1zos:D (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5693 1zos:E (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5694 1zos:F (1.6) BS01 MTM 3.2.2.9 GO:0003824 ... Q8DQ16 17059210 MOAD: Ki=1uM
    5695 1zp5:A (1.8) BS05 2NI 3.4.24.34 GO:0004222 ... P22894 16242329 MOAD: ic50=1200uM
    PDBbind: -logKd/Ki=2.92, IC50=1200uM
    BindingDB: IC50=1200000nM
    5696 1zp8:A (2.02) BS01 AB2 3.4.23.16 GO:0004190 ... O92139 15934050 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    5697 1zpa:A (2.02) BS01 A83 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 15934050 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    5698 1zpb:A (2.1) BS01 995 3.4.21.27 GO:0004252 ... P03951 16524727 PDBbind: -logKd/Ki=6.07, IC50=0.85uM
    5699 1zpc:A (2.6) BS01 716 3.4.21.27 GO:0004252 ... P03951 16524727 PDBbind: -logKd/Ki=6.60, IC50=0.254uM
    5700 1zpt:A (1.95) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5701 1zpt:B (1.95) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5702 1zpt:C (1.95) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5703 1zq3:P (-1.00) BS01 dna ? GO:0000981 ... P09081 16406070 PDBbind: Kd=428pM
    5704 1zq3:P (-1.00) BS02 dna ? GO:0000981 ... P09081 16406070 PDBbind: Kd=428pM
    5705 1zq5:A (1.3) BS01 E04 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 17166832 MOAD: Ki=6.9nM
    BindingDB: Ki=6.9nM
    5706 1zrb:A (1.9) BS02 062 3.4.21.5 GO:0004252 ... P00734 15801822 MOAD: Ki=0.77nM
    5707 1zrq:A (2.2) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5708 1zrq:B (2.2) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5709 1zrq:C (2.2) BS02 NAI 1.5.1.54 GO:0004489 ... P0AEZ1 16114881 MOAD: Ki=10uM
    5710 1zrz:A (3.0) BS01 BI1 2.7.11.13 GO:0004672 ... P41743 16125198 PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=3463nM
    5711 1zs0:A (1.56) BS05 EIN 3.4.24.34 GO:0004222 ... P22894 16451058 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.15, Ki=700nM
    BindingDB: Ki=700nM, IC50=810nM
    5712 1zsb:A (2.0) BS02 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8639494 MOAD: Kd=250mM
    PDBbind: -logKd/Ki=0.60, Kd=250mM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    5713 1zsf:A (1.98) BS01 0ZS 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 16627941 PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    5714 1zsf:B (1.98) BS01 0ZS 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 16627941 MOAD: Ki=0.12nM
    PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    5715 1zsh:A (2.9) BS02 IHP ? GO:0000822 ... P17870 16439357 PDBbind: -logKd/Ki=7.07, Kd=85nM
    5716 1zsr:A (2.06) BS01 0ZT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 16627941 MOAD: Ki=0.15nM
    PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    5717 1zsr:B (2.06) BS01 0ZT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 16627941 PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    5718 1ztq:A (2.0) BS06 033 3.4.24.- GO:0004222 ... P45452 16005220 MOAD: ic50=1.3nM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.3nM
    5719 1ztq:B (2.0) BS06 033 3.4.24.- GO:0004222 ... P45452 16005220 MOAD: ic50=1.3nM
    BindingDB: IC50=1.3nM
    5720 1ztq:C (2.0) BS06 033 3.4.24.- GO:0004222 ... P45452 16005220 MOAD: ic50=1.3nM
    BindingDB: IC50=1.3nM
    5721 1ztq:D (2.0) BS06 033 3.4.24.- GO:0004222 ... P45452 16005220 MOAD: ic50=1.3nM
    BindingDB: IC50=1.3nM
    5722 1ztz:B (2.15) BS02 CB5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 16227435 MOAD: Ki=66nM
    5723 1zua:X (1.25) BS02 TOL 1.1.1.300
    1.1.1.54    		 GO:0001523 ... O60218 18087047 MOAD: ic50=10nM
    BindingDB: IC50=54nM, Ki=50nM
    5724 1zuc:A (2.0) BS01 T98 ? N/A P06401 15937332 MOAD: ic50=1.7nM
    PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: IC50=0.5nM, EC50=0.15nM
    5725 1zuc:B (2.0) BS01 T98 ? N/A P06401 15937332 MOAD: ic50=1.7nM
    BindingDB: IC50=0.5nM, EC50=0.15nM
    5726 1zvx:A (1.87) BS05 FIN 3.4.24.34 GO:0004222 ... P22894 16451058 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    BindingDB: Ki=0.6nM, IC50=1.4nM
    5727 1zw5:A (2.3) BS04 ZOL 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 16684881 BindingDB: IC50=100nM, Ki=85.9nM
    5728 1zxc:A (2.28) BS02 IH6 3.4.24.86 GO:0004222 ... P78536 16084720 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    5729 1zxc:B (2.28) BS02 IH6 3.4.24.86 GO:0004222 ... P78536 16084720 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    5730 1zxv:A (2.67) BS02 MFM 3.4.24.83 GO:0003824 ... Q52NH3 15983377 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: IC50=1700nM, Ki=800nM
    5731 1zxv:B (2.67) BS02 MFM 3.4.24.83 GO:0003824 ... Q52NH3 15983377 BindingDB: IC50=1700nM, Ki=800nM
    5732 1zyj:A (2.0) BS01 BI5 2.7.11.24 GO:0000077 ... Q16539 16169718 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    5733 1zyr:C (3.0) BS01 STD 2.7.7.6 GO:0000428 ... Q8RQE9 16122422 PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    5734 1zyr:D (3.0) BS01 STD 2.7.7.6 GO:0000287 ... Q8RQE8 16122422 PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    5735 1zz1:A (1.57) BS02 SHH 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.95uM
    PDBbind: -logKd/Ki=6.02, IC50=0.95uM
    BindingDB: Ki=1000nM, Kd=300nM, IC50=1000nM
    5736 1zz1:B (1.57) BS02 SHH 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.95uM
    BindingDB: Ki=1000nM, Kd=300nM, IC50=1000nM
    5737 1zz1:C (1.57) BS02 SHH 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.95uM
    BindingDB: Ki=1000nM, Kd=300nM, IC50=1000nM
    5738 1zz1:D (1.57) BS02 SHH 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.95uM
    BindingDB: Ki=1000nM, Kd=300nM, IC50=1000nM
    5739 1zz2:A (2.0) BS01 B11 2.7.11.24 GO:0000077 ... Q16539 16169718 MOAD: ic50=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6.0uM
    BindingDB: IC50=6000nM
    5740 1zz3:A (1.76) BS01 3YP 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.29uM
    PDBbind: -logKd/Ki=6.54, IC50=0.290uM
    5741 1zz3:B (1.76) BS01 3YP 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.29uM
    5742 1zz3:C (1.76) BS01 3YP 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.29uM
    5743 1zz3:D (1.76) BS01 3YP 3.5.1.- GO:0000122 ... Q70I53 16242151 MOAD: ic50=0.29uM
    5744 1zzi:A (1.8) BS01 dna ? GO:0003676 ... P61978 16004877 PDBbind: Kd=2.2uM
    5745 1zzi:B (1.8) BS01 dna ? GO:0003676 ... P61978 16004877 PDBbind: Kd=2.2uM
    5746 1zzl:A (2.0) BS01 TZY 2.7.11.24 GO:0000077 ... Q16539 16134941 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5.0nM
    BindingDB: IC50=5nM
    5747 1zzq:A (1.9) BS05 DP9 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=20uM
    BindingDB: Ki=100nM, IC50=640nM
    5748 1zzq:B (1.9) BS06 DP9 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=20uM
    BindingDB: Ki=100nM, IC50=640nM
    5749 1zzr:A (2.05) BS04 DP9 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=42uM
    BindingDB: Ki=100nM, IC50=640nM
    5750 1zzr:B (2.05) BS05 DP9 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=42uM
    BindingDB: Ki=100nM, IC50=640nM
    5751 1zzs:A (1.85) BS04 DP9 1.14.13.39 GO:0004517 ... P29473 16285725 MOAD: Ki=5.1uM
    BindingDB: IC50=29000nM, Ki=128000nM
    5752 1zzs:B (1.85) BS05 DP9 1.14.13.39 GO:0004517 ... P29473 16285725 MOAD: Ki=5.1uM
    BindingDB: IC50=29000nM, Ki=128000nM
    5753 1zzt:A (2.14) BS04 DP9 1.14.13.39 GO:0004517 ... P29473 16285725 MOAD: Ki=1.1uM
    BindingDB: IC50=29000nM, Ki=128000nM
    5754 1zzt:B (2.14) BS05 DP9 1.14.13.39 GO:0004517 ... P29473 16285725 MOAD: Ki=1.1uM
    BindingDB: IC50=29000nM, Ki=128000nM
    5755 1zzu:A (1.9) BS05 DP1 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=63.3uM
    BindingDB: Ki=130nM
    5756 1zzu:B (1.9) BS06 DP1 1.14.13.39 GO:0004517 ... P29476 16285725 MOAD: Ki=63.3uM
    BindingDB: Ki=130nM
    5757 1zzz:A (1.9) BS01 0IV 3.4.21.4 GO:0004252 ... P00760 9724521 PDBbind: -logKd/Ki=5.14, Ki=7300nM
    5758 220l:A (1.85) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 9514755 MOAD: Kd=0.4mM
    PDBbind: -logKd/Ki=3.40, Kd=0.4mM
    5759 223l:A (1.9) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 9514755 MOAD: Kd=0.4mM
    PDBbind: -logKd/Ki=3.40, Kd=0.4mM
    5760 225l:A (1.9) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 9514755 BindingDB: Kd=151000nM
    5761 2a06:C (2.1) BS03 SMA 1.10.2.2 GO:0005739 ... P00157 16024040 MOAD: Kd~30pM
    5762 2a06:P (2.1) BS04 SMA 1.10.2.2 GO:0005739 ... P00157 16024040 MOAD: Kd~30pM
    5763 2a0c:X (1.95) BS01 CK9 2.7.11.22 GO:0000082 ... P24941 16003486 PDBbind: -logKd/Ki=7.30, IC50=50nM
    5764 2a0i:A (2.72) BS01 dna 3.6.4.12
    5.6.2.1    		 N/A P14565 16216584 PDBbind: Kd=0.43nM
    5765 2a0w:A (2.28) BS01 DIH 2.4.2.1 GO:0000255 ... P00491 17407325 MOAD: Ki=270pM
    5766 2a0x:A (2.28) BS01 DIH 2.4.2.1 GO:0000255 ... P00491 17407325 MOAD: Ki=950pM
    5767 2a0y:A (2.28) BS01 DIH 2.4.2.1 GO:0000255 ... P00491 17407325 MOAD: Ki=900pM
    5768 2a14:A (1.7) BS01 SAH 2.1.1.49
    2.1.1.96    		 GO:0004790 ... O95050 N/A PDBbind: -logKd/Ki=5.70, Ki=2.0uM
    BindingDB: Ki=2000nM
    5769 2a1h:A (1.8) BS02 GBN 2.6.1.42 GO:0003824 ... O15382 16141215 MOAD: Ki=65.4mM
    5770 2a1h:A (1.8) BS03 GBN 2.6.1.42 GO:0003824 ... O15382 16141215 MOAD: Ki=65.4mM
    5771 2a1h:B (1.8) BS01 GBN 2.6.1.42 GO:0003824 ... O15382 16141215 MOAD: Ki=65.4mM
    5772 2a1h:B (1.8) BS03 GBN 2.6.1.42 GO:0003824 ... O15382 16141215 MOAD: Ki=65.4mM
    5773 2a29:A (-1.00) BS01 ANP 7.2.2.6 GO:0000166 ... P03960 16354672 PDBbind: -logKd/Ki=2.85, Kd=1.4mM
    5774 2a2g:A (2.9) BS01 LEO ? GO:0036094 ... P02761 10089305 PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    5775 2a2i:A (1.95) BS03 A5P 2.5.1.55 GO:0005737 ... O66496 19228070 MOAD: Kd=0.04uM
    5776 2a2i:B (1.95) BS03 A5P 2.5.1.55 GO:0005737 ... O66496 19228070 MOAD: Kd=0.04uM
    5777 2a2r:A (1.4) BS01 GSN 2.5.1.18 GO:0000302 ... P09211 16597834 MOAD: Ka=3300M^-1
    5778 2a2r:B (1.4) BS02 GSN 2.5.1.18 GO:0000302 ... P09211 16597834 MOAD: Ka=3300M^-1
    5779 2a2s:A (1.7) BS01 GSN 2.5.1.18 GO:0000302 ... P09211 16597834 MOAD: Ka=3300M^-1
    5780 2a2s:B (1.7) BS02 GSN 2.5.1.18 GO:0000302 ... P09211 16597834 MOAD: Ka=3300M^-1
    5781 2a2x:H (2.44) BS02 NA9 3.4.21.5 GO:0004252 ... P00734 16460939 MOAD: ic50=20.2nM
    PDBbind: -logKd/Ki=7.69, IC50=20.2nM
    BindingDB: IC50=20.2nM
    5782 2a3a:A (2.1) BS01 TEP 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    BindingDB: IC50=1500000nM
    5783 2a3a:A (2.1) BS02 TEP 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    BindingDB: IC50=1500000nM
    5784 2a3a:A (2.1) BS03 TEP 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    BindingDB: IC50=1500000nM
    5785 2a3a:B (2.1) BS01 TEP 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=1500uM
    BindingDB: IC50=1500000nM
    5786 2a3a:B (2.1) BS02 TEP 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=1500uM
    BindingDB: IC50=1500000nM
    5787 2a3b:A (1.9) BS01 CFF 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=469uM
    BindingDB: IC50=469000nM
    5788 2a3b:A (1.9) BS02 CFF 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=469uM
    BindingDB: IC50=469000nM
    5789 2a3b:A (1.9) BS03 CFF 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=469uM
    BindingDB: IC50=469000nM
    5790 2a3b:B (1.9) BS01 CFF 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=469uM
    BindingDB: IC50=469000nM
    5791 2a3b:B (1.9) BS02 CFF 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: ic50=469uM
    BindingDB: IC50=469000nM
    5792 2a3c:A (2.07) BS01 PNX 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.43, Ki=37uM
    BindingDB: Kd=43000nM, Ki=37000nM, IC50=126000nM
    5793 2a3c:A (2.07) BS02 PNX 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.43, Ki=37uM
    BindingDB: Kd=43000nM, Ki=37000nM, IC50=126000nM
    5794 2a3c:B (2.07) BS01 PNX 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: Kd=43uM
    BindingDB: Kd=43000nM, Ki=37000nM, IC50=126000nM
    5795 2a3c:B (2.07) BS02 PNX 3.2.1.14 GO:0004553 ... Q873X9 16183021 MOAD: Kd=43uM
    BindingDB: Kd=43000nM, Ki=37000nM, IC50=126000nM
    5796 2a3i:A (1.95) BS02 C0R ? N/A P08235 16061183 BindingDB: Kd=0.500000nM
    5797 2a3w:A (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    5798 2a3w:B (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    5799 2a3w:C (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    5800 2a3w:D (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218