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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5201 1xdd:B (2.2) BS03 AAY ? N/A P20701 15304496 MOAD: ic50=0.2uM
    5202 1xdg:A (2.1) BS02 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    5203 1xdg:A (2.1) BS03 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    5204 1xdg:B (2.1) BS01 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    BindingDB: IC50=50nM
    5205 1xdg:B (2.1) BS03 AB8 ? N/A P20701 15304496 MOAD: ic50=0.05uM
    BindingDB: IC50=50nM
    5206 1xdk:A (2.9) BS02 9CR ? GO:0003677 ... P28700 15528208 BindingDB: IC50=82nM, Kd=32nM, EC50=200nM
    5207 1xdk:B (2.9) BS02 9CR ? GO:0003677 ... P22605 15528208 BindingDB: Kd=7nM
    5208 1xdk:E (2.9) BS02 9CR ? GO:0003677 ... P28700 15528208 BindingDB: IC50=82nM, Kd=32nM, EC50=200nM
    5209 1xdk:F (2.9) BS02 9CR ? GO:0003677 ... P22605 15528208 BindingDB: Kd=7nM
    5210 1xff:A (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    5211 1xff:B (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    5212 1xfv:A (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022 PDBbind: -logKd/Ki=3.89, Kd=130uM
    5213 1xge:A (1.9) BS03 DOR 3.5.2.3 GO:0004151 ... P05020 15826651 MOAD: Kd=20.8uM
    PDBbind: -logKd/Ki=4.68, Kd=20.8uM
    5214 1xgi:B (1.96) BS01 NST 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    5215 1xgj:A (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    BindingDB: Ki=1000nM
    5216 1xgj:B (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    BindingDB: Ki=1000nM
    5217 1xh0:A (2.0) BS01 AAO 3.2.1.1 GO:0003824 ... P04746 15722449 BindingDB: Ki=1250nM
    5218 1xh4:A (2.45) BS02 R69 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=34nM
    PDBbind: -logKd/Ki=7.47, Kd=34nM
    BindingDB: IC50=30nM
    5219 1xh5:A (2.05) BS02 R68 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=3400nM
    PDBbind: -logKd/Ki=5.47, Kd=3400nM
    5220 1xh6:A (1.9) BS02 R94 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=48nM
    PDBbind: -logKd/Ki=7.32, Kd=48nM
    BindingDB: IC50=400nM
    5221 1xh7:A (2.47) BS02 R96 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=150nM
    PDBbind: -logKd/Ki=6.82, Kd=150nM
    BindingDB: IC50=1900nM
    5222 1xh8:A (1.6) BS02 R55 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: ic50=1700nM
    PDBbind: -logKd/Ki=5.77, IC50=1700nM
    BindingDB: IC50=1700nM
    5223 1xh9:A (1.64) BS02 R69 2.7.11.11 GO:0001669 ... P00517 15634010 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    BindingDB: IC50=30nM
    5224 1xhy:A (1.85) BS01 KAI ? GO:0015276 ... P19491 15591246 MOAD: Ki=624nM
    PDBbind: -logKd/Ki=6.18, Ki=662nM
    BindingDB: EC50=380000nM, Ki=3690nM
    5225 1xi2:A (1.5) BS03 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    5226 1xi2:A (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    5227 1xi2:B (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    5228 1xj7:A (2.7) BS02 DHT ? N/A P10275 15563469 BindingDB: IC50=>10000nM, EC50=6nM, Ki=0.2nM
    5229 1xjb:A (1.9) BS03 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    5230 1xjb:B (1.9) BS02 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    5231 1xjd:A (2.0) BS01 STU 2.7.11.13 GO:0004672 ... Q04759 15364937 MOAD: Ki=0.33nM
    PDBbind: -logKd/Ki=9.48, Ki=0.33nM
    5232 1xjv:A (1.73) BS01 dna ? GO:0000723 ... Q9NUX5 15558049 PDBbind: Kd=9.2nM
    5233 1xk5:A (2.4) BS01 TPG ? GO:0005634 ... O95149 15920472 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    5234 1xk9:A (2.1) BS01 P34 2.4.2.36 GO:0047286 ... P11439 15458385 MOAD: Ki=140nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    5235 1xk9:B (2.1) BS01 P34 2.4.2.36 GO:0047286 ... P11439 15458385 MOAD: Ki=140nM
    5236 1xka:C (2.3) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    PDBbind: -logKd/Ki=6.88, Ki=131nM
    BindingDB: IC50=270nM
    5237 1xkb:C (2.4) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    BindingDB: IC50=270nM
    5238 1xkb:D (2.4) BS02 4PP 3.4.21.6 GO:0004252 ... P00742 9618463 MOAD: Ki=131nM
    BindingDB: IC50=270nM
    5239 1xkk:A (2.4) BS01 FMM 2.7.10.1 GO:0004672 ... P00533 15374980 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: IC50=11nM, Kd=1.2nM, Ki=3.0nM
    5240 1xkx:A (1.93) BS01 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    5241 1xkx:A (1.93) BS02 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    5242 1xkx:A (1.93) BS03 IMK 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=8.6uM
    BindingDB: Ki=9000nM, IC50=8600nM
    5243 1xl0:A (1.92) BS01 OX2 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=145.2uM
    BindingDB: Ki=145000nM
    5244 1xl1:A (2.1) BS01 TH1 2.4.1.1 GO:0000166 ... P00489 15741340 MOAD: Ki=76uM
    BindingDB: Ki=76000nM
    5245 1xl2:A (1.5) BS01 189 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15822136 MOAD: Ki=1.5uM
    5246 1xl5:B (1.73) BS01 190 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15822136 MOAD: Ki=45nM
    5247 1xli:A (2.5) BS01 GLT 5.3.1.5 GO:0000287 ... P12070 2319597 MOAD: Ki=33mM
    5248 1xli:B (2.5) BS01 GLT 5.3.1.5 GO:0000287 ... P12070 2319597 MOAD: Ki=33mM
    5249 1xls:A (2.96) BS02 9CR ? GO:0003677 ... P19793 15610733 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    5250 1xls:B (2.96) BS03 9CR ? GO:0003677 ... P19793 15610733 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    5251 1xls:C (2.96) BS02 9CR ? GO:0003677 ... P19793 15610733 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    5252 1xls:D (2.96) BS02 9CR ? GO:0003677 ... P19793 15610733 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    5253 1xlx:A (2.19) BS02 CIO 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=100nM, Ki=38nM
    5254 1xlx:B (2.19) BS02 CIO 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.025uM
    BindingDB: IC50=100nM, Ki=38nM
    5255 1xlz:A (2.06) BS02 FIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.96uM
    PDBbind: -logKd/Ki=6.02, IC50=0.96uM
    5256 1xlz:B (2.06) BS02 FIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.96uM
    5257 1xm4:A (2.31) BS02 PIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.041nM
    PDBbind: -logKd/Ki=10.39, IC50=0.041nM
    BindingDB: IC50=1nM, Ki=1.5nM
    5258 1xm4:B (2.31) BS02 PIL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.041nM
    BindingDB: IC50=1nM, Ki=1.5nM
    5259 1xm6:A (1.92) BS02 5RM 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.42uM
    PDBbind: -logKd/Ki=6.38, IC50=0.42uM
    BindingDB: IC50=420nM
    5260 1xm6:B (1.92) BS02 5RM 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.42uM
    BindingDB: IC50=420nM
    5261 1xmu:A (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    PDBbind: -logKd/Ki=9.08, IC50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    5262 1xmu:B (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    5263 1xmy:A (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=7.30, IC50=50.12nM
    5264 1xmy:B (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    5265 1xn0:A (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    5266 1xn0:A (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    5267 1xn0:B (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    5268 1xn0:B (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    5269 1xnn:A (2.2) BS01 HYQ ? N/A P15207 15603938 MOAD: Ki=0.5nM
    5270 1xns:A (2.8) BS01 dna ? GO:0003677 ... P06956 15591069 PDBbind: Kd=1.3uM
    5271 1xns:A (2.8) BS02 dna ? GO:0003677 ... P06956 15591069 PDBbind: Kd=1.3uM
    5272 1xns:B (2.8) BS01 dna ? GO:0003677 ... P06956 15591069 PDBbind: Kd=1.3uM
    5273 1xns:B (2.8) BS02 dna ? GO:0003677 ... P06956 15591069 PDBbind: Kd=1.3uM
    5274 1xnx:A (2.9) BS01 ATE ? GO:0003677 ... O35627 15610734 PDBbind: -logKd/Ki=6.38, Ki=416nM
    BindingDB: IC50=250nM
    5275 1xnx:B (2.9) BS01 ATE ? GO:0003677 ... O35627 15610734 BindingDB: IC50=250nM
    5276 1xnz:A (1.52) BS03 FCD 3.4.11.18 GO:0004177 ... P0AE18 15506752 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=116000nM
    5277 1xo2:B (2.9) BS01 FSE 2.7.11.22 GO:0000082 ... Q00534 15689157 PDBbind: -logKd/Ki=6.07, IC50=0.85uM
    BindingDB: IC50=850nM
    5278 1xoe:A (2.2) BS01 ABX 3.2.1.18 GO:0004308 ... P03472 15582424 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    5279 1xog:A (2.8) BS01 ABW 3.2.1.18 GO:0004308 ... P03472 15582424 PDBbind: -logKd/Ki=6.39, IC50=410nM
    5280 1xoi:A (2.1) BS03 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    5281 1xoi:A (2.1) BS04 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    5282 1xoi:B (2.1) BS01 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    5283 1xoi:B (2.1) BS04 288 2.4.1.1 GO:0000166 ... P06737 15603973 MOAD: ic50=0.057uM
    5284 1xom:A (1.55) BS02 CIO 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: IC50=11nM
    5285 1xom:B (1.55) BS02 CIO 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.011uM
    BindingDB: IC50=11nM
    5286 1xon:A (1.72) BS02 PIL 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.021nM
    PDBbind: -logKd/Ki=10.68, IC50=0.021nM
    BindingDB: IC50=21nM
    5287 1xon:B (1.72) BS02 PIL 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.021nM
    BindingDB: IC50=21nM
    5288 1xoq:A (1.83) BS02 ROF 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.68nM
    PDBbind: -logKd/Ki=9.17, IC50=0.68nM
    BindingDB: IC50=0.400000nM
    5289 1xoq:B (1.83) BS02 ROF 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.68nM
    BindingDB: IC50=0.400000nM
    5290 1xor:A (1.54) BS02 ZAR 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=390nM
    5291 1xor:B (1.54) BS02 ZAR 3.1.4.53 GO:0004114 ... Q08499 15576036 MOAD: ic50=0.39uM
    BindingDB: IC50=390nM
    5292 1xos:A (2.28) BS02 VIA 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    BindingDB: IC50=20000nM
    5293 1xot:A (2.34) BS02 VDN 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=3.8uM
    5294 1xot:B (2.34) BS02 VDN 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=3.8uM
    5295 1xow:A (1.8) BS02 R18 ? N/A P10275 15525515 PDBbind: -logKd/Ki=9.28, Kd=0.52nM
    BindingDB: Kd=0.99nM, IC50=0.302000nM, EC50=0.013000nM, Ki=0.400000nM
    5296 1xoz:A (1.37) BS02 CIA 3.1.4.35 GO:0004114 ... O76074 15576036 MOAD: ic50=0.0012uM
    PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    BindingDB: IC50=4nM, Ki=10nM
    5297 1xp0:A (1.79) BS02 VDN 3.1.4.35 GO:0004114 ... O76074 15576036 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1.0nM
    BindingDB: IC50=0.890000nM, Ki=1nM
    5298 1xp1:A (1.8) BS01 AIH ? N/A P03372 15582421 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: IC50=0.5nM
    5299 1xp6:A (1.7) BS01 AIU ? N/A P03372 15582421 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    5300 1xp9:A (1.8) BS01 AIJ ? N/A P03372 15582421 MOAD: ic50=1.3nM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.3nM
    5301 1xpc:A (1.6) BS01 AIT ? N/A P03372 15582421 MOAD: ic50=1.7nM
    PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: IC50=1.7nM
    5302 1xpz:A (2.02) BS02 4TZ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15865431 MOAD: Kd=84nM
    PDBbind: -logKd/Ki=7.08, Kd=84nM
    BindingDB: IC50=27nM
    5303 1xq0:A (1.76) BS02 4TR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15865431 MOAD: Kd=454nM
    PDBbind: -logKd/Ki=6.34, Kd=454nM
    BindingDB: IC50=137nM
    5304 1xq3:A (2.25) BS01 R18 ? N/A P10275 15525515 BindingDB: Kd=0.99nM, IC50=0.302000nM, EC50=0.013000nM, Ki=0.400000nM
    5305 1xqc:A (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    PDBbind: -logKd/Ki=7.20, IC50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    5306 1xqc:B (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    5307 1xqc:C (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    5308 1xqc:D (2.05) BS01 AEJ ? N/A P03372 15658851 MOAD: ic50=63nM
    BindingDB: EC50=23.2nM, IC50=63nM
    5309 1xqd:A (1.8) BS02 DND 1.7.1.14 GO:0004497 ... P23295 15313618 MOAD: Kd=0.07mM
    5310 1xqh:A (1.75) BS02 SAH 2.1.1.364 GO:0005694 ... Q8WTS6 15525938 BindingDB: IC50=30000nM
    5311 1xqh:E (1.75) BS02 SAH 2.1.1.364 GO:0005694 ... Q8WTS6 15525938 BindingDB: IC50=30000nM
    5312 1xry:A (2.1) BS03 BES 3.4.11.10 GO:0006508 ... Q01693 N/A BindingDB: IC50=1.6nM, Ki=1.6nM
    5313 1xs7:D (2.8) BS01 MMI 3.4.23.46 GO:0004190 ... P56817 15582402 PDBbind: -logKd/Ki=7.60, Ki=25.1nM
    BindingDB: Ki=25nM
    5314 1xsc:A (-1.00) BS01 ATP 3.6.1.17 GO:0004081 ... P50583 15596429 PDBbind: -logKd/Ki=4.30, Kd=0.05mM
    5315 1xt3:A (2.4) BS01 IDS ? GO:0005576 ... P60301 15590643 PDBbind: -logKd/Ki=5.70, Kd=2.01uM
    5316 1xt8:A (2.0) BS01 CYS ? N/A Q0P9S0 15948956 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    5317 1xuc:A (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=7.14, IC50=72nM
    BindingDB: IC50=72nM
    5318 1xuc:B (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    BindingDB: IC50=72nM
    5319 1xud:A (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    5320 1xud:B (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    5321 1xuf:A (1.9) BS02 BAZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    5322 1xug:A (1.5) BS03 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    PDBbind: -logKd/Ki=7.05, Ki=0.09uM
    5323 1xui:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142 Manual survey: Ki=19uM (9468142)
    5324 1xui:A (1.5) BS02 BAO 3.4.21.4 GO:0004175 ... P00760 9468142 Manual survey: Ki=19uM (9468142)
    5325 1xuj:A (1.92) BS02 BOZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki<1nM
    5326 1xuk:A (1.8) BS02 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=19uM
    5327 1xuo:A (1.8) BS02 LA1 ? N/A P20701 15686945 MOAD: ic50=69nM
    PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=69nM
    5328 1xur:A (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    PDBbind: -logKd/Ki=5.18, IC50=6600nM
    BindingDB: IC50=6600nM
    5329 1xur:B (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    BindingDB: IC50=6600nM
    5330 1xvp:D (2.6) BS02 CID ? GO:0003677 ... Q14994 15610735 BindingDB: EC50=49nM
    5331 1xw6:A (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    5332 1xw6:B (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    5333 1xw6:C (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    5334 1xw6:D (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    5335 1xws:A (1.8) BS01 BI1 2.7.11.1 GO:0004672 ... P11309 N/A PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: IC50=150nM, Kd=10.0nM
    5336 1xxe:A (-1.00) BS02 TUX 3.5.1.108 GO:0006796 ... O67648 15667205 PDBbind: -logKd/Ki=5.41, Ki=3.9uM
    5337 1xxh:D (3.45) BS02 AGS 2.7.7.7 GO:0003677 ... P06710 15556993 PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    5338 1xxi:D (4.1) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 15556993 PDBbind: -logKd/Ki=5.52, Kd=3.0uM
    5339 1xz1:A (1.75) BS01 HLT ? GO:0005506 ... P02791 15791007 MOAD: Ka~100000M^-1
    5340 1xz8:B (2.8) BS02 U5P 2.4.2.9 GO:0003723 ... P41007 15716449 PDBbind: -logKd/Ki=4.52, Kd=30uM
    5341 1xzx:X (2.5) BS01 T3 ? GO:0003677 ... P10828 15466465 MOAD: Kd=0.06nM
    PDBbind: -logKd/Ki=10.22, Kd=0.06nM
    5342 1y0l:A (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    5343 1y0l:D (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    5344 1y0l:F (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    5345 1y0l:H (2.5) BS01 HAN N/A N/A N/A 15788533 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd=1nM
    5346 1y0l:L (2.5) BS01 HAN N/A N/A N/A 15788533 PDBbind: -logKd/Ki=9.00, Kd=1nM
    5347 1y0x:X (3.1) BS01 T44 ? GO:0003677 ... P10828 15466465 PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: EC50=240nM
    5348 1y1d:A (1.7) BS01 FHI ? GO:0005179 ... P02766 15689188 BindingDB: Kd=320nM
    5349 1y1m:A (1.8) BS01 AC5 ? GO:0015276 ... P35439 15996549 MOAD: Ki=15.3mM
    PDBbind: -logKd/Ki=1.82, Ki=15.3mM
    5350 1y1m:B (1.8) BS01 AC5 ? GO:0015276 ... P35439 15996549 MOAD: Ki=15.3mM
    5351 1y1z:A (1.5) BS01 192 ? GO:0015276 ... P35439 15996549 MOAD: Ki=0.831mM
    PDBbind: -logKd/Ki=3.08, Ki=0.831mM
    5352 1y20:A (1.4) BS01 1AC ? GO:0015276 ... P35439 15996549 MOAD: Ki=4.8uM
    PDBbind: -logKd/Ki=5.32, Ki=4.8uM
    5353 1y2b:A (1.4) BS02 DEE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=82uM
    PDBbind: -logKd/Ki=4.09, IC50=82uM
    BindingDB: IC50=82000nM
    5354 1y2b:B (1.4) BS02 DEE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=82uM
    BindingDB: IC50=82000nM
    5355 1y2c:A (1.67) BS02 3DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    5356 1y2c:B (1.67) BS02 3DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.27uM
    5357 1y2d:A (1.7) BS02 4DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    BindingDB: IC50=2000nM
    5358 1y2d:B (1.7) BS02 4DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=2uM
    BindingDB: IC50=2000nM
    5359 1y2e:A (2.1) BS02 5DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.16uM
    PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    BindingDB: IC50=160nM
    5360 1y2e:B (2.1) BS02 5DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.16uM
    BindingDB: IC50=160nM
    5361 1y2f:A (2.0) BS01 WAI ? GO:0016020 ... P77173 15743191 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    BindingDB: Ki=12000nM, Kd=12000nM
    5362 1y2g:A (1.9) BS01 CL3 ? GO:0016020 ... P77173 15743191 MOAD: Kd=83.1uM
    PDBbind: -logKd/Ki=4.08, Kd=83.1uM
    BindingDB: Kd=83100nM
    5363 1y2h:A (2.4) BS02 6DE 3.1.4.53 GO:0004114 ... Q07343 15685167 MOAD: ic50=0.056uM
    PDBbind: -logKd/Ki=7.25, IC50=0.056uM
    BindingDB: IC50=56nM
    5364 1y2h:B (2.4) BS02 6DE 3.1.4.53 GO:0004114 ... Q07343 15685167 MOAD: ic50=0.056uM
    BindingDB: IC50=56nM
    5365 1y2j:A (2.55) BS02 7DE 3.1.4.53 GO:0004114 ... Q07343 15685167 PDBbind: -logKd/Ki=7.48, IC50=0.033uM
    BindingDB: IC50=33nM
    5366 1y2j:B (2.55) BS02 7DE 3.1.4.53 GO:0004114 ... Q07343 15685167 BindingDB: IC50=33nM
    5367 1y2k:A (1.36) BS02 7DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.021uM
    PDBbind: -logKd/Ki=7.68, IC50=0.021uM
    BindingDB: IC50=21nM
    5368 1y2k:B (1.36) BS02 7DE 3.1.4.53 GO:0004114 ... Q08499 15685167 MOAD: ic50=0.021uM
    BindingDB: IC50=21nM
    5369 1y3g:E (2.1) BS06 AMM 3.4.24.27 GO:0004222 ... P00800 16342943 PDBbind: -logKd/Ki=7.40, Ki=40nM
    5370 1y3g:E (2.1) BS07 LEU 3.4.24.27 GO:0004222 ... P00800 16342943 PDBbind: -logKd/Ki=7.40, Ki=40nM
    5371 1y3n:A (1.6) BS01 MAV ? GO:0046872 ... Q9KWT6 15794643 PDBbind: -logKd/Ki=5.55, Kd=2.8uM
    5372 1y3n:A (1.6) BS02 BEM ? GO:0046872 ... Q9KWT6 15794643 PDBbind: -logKd/Ki=5.55, Kd=2.8uM
    5373 1y3p:A (2.0) BS01 MAV ? GO:0046872 ... Q9KWT6 15794643 PDBbind: -logKd/Ki=4.82, Kd=15uM
    5374 1y3p:A (2.0) BS02 MAV ? GO:0046872 ... Q9KWT6 15794643 PDBbind: -logKd/Ki=4.82, Kd=15uM
    5375 1y3p:A (2.0) BS03 BEM ? GO:0046872 ... Q9KWT6 15794643 PDBbind: -logKd/Ki=4.82, Kd=15uM
    5376 1y3v:A (1.6) BS02 UIR 3.4.21.4 GO:0004175 ... P00760 16374786 MOAD: Ki=2300nM
    PDBbind: -logKd/Ki=5.64, Ki=2300nM
    5377 1y3w:A (1.8) BS02 UIP 3.4.21.4 GO:0004175 ... P00760 16374786 MOAD: Ki=1680nM
    PDBbind: -logKd/Ki=5.77, Ki=1680nM
    5378 1y3x:A (1.7) BS02 UIB 3.4.21.4 GO:0004175 ... P00760 16374786 MOAD: Ki=7315nM
    PDBbind: -logKd/Ki=5.14, Ki=7315nM
    5379 1y3y:A (1.75) BS02 UIR 3.4.21.4 GO:0004175 ... P00760 16374786 MOAD: Ki=2300nM
    PDBbind: -logKd/Ki=5.64, Ki=2300nM
    5380 1y4z:C (2.0) BS03 PCI 1.7.5.1 GO:0005886 ... P11350 15615728 MOAD: Ki=57nM
    PDBbind: -logKd/Ki=7.24, Ki=57nM
    5381 1y52:X (1.7) BS01 BTN ? GO:0005576 ... P56734 15858262 MOAD: Kd=0.000000064M
    5382 1y52:Y (1.7) BS01 BTN ? GO:0005576 ... P56734 15858262 MOAD: Kd=0.000000064M
    5383 1y57:A (1.91) BS01 MPZ 2.7.10.2 GO:0004672 ... P12931 15939018 MOAD: ic50=1633nM
    PDBbind: -logKd/Ki=5.79, IC50=1633nM
    BindingDB: IC50=7800nM
    5384 1y59:T (1.2) BS02 TL1 3.4.21.4 GO:0004175 ... P00760 17191291 MOAD: Ki=1.19uM
    5385 1y5a:T (1.4) BS02 TL2 3.4.21.4 GO:0004175 ... P00760 17191291 MOAD: Ki=1.33uM
    5386 1y5b:T (1.65) BS02 TL3 3.4.21.4 GO:0004175 ... P00760 17191291 MOAD: Kd=1.26uM
    5387 1y5n:C (2.5) BS03 PCI 1.7.5.1 GO:0005886 ... P11350 15615728 MOAD: Ki=57nM
    5388 1y5u:T (1.6) BS02 TL4 3.4.21.4 GO:0004175 ... P00760 17191291 MOAD: Kd=0.22uM
    5389 1y5v:A (1.58) BS02 NE8 2.4.2.29 GO:0002099 ... P28720 17524419 MOAD: Ki=1uM
    5390 1y5w:A (1.58) BS02 NEZ 2.4.2.29 GO:0002099 ... P28720 17524419 MOAD: Ki=6.9uM
    5391 1y5x:A (2.1) BS02 E89 2.4.2.29 GO:0002099 ... P28720 17524419 MOAD: Ki=3.7uM
    5392 1y5x:D (2.1) BS02 E89 2.4.2.29 GO:0002099 ... P28720 17524419 MOAD: Ki=3.7uM
    5393 1y69:8 (3.33) BS01 rna ? GO:0006412 ... P0A805 15616575 PDBbind: Kd=0.52uM
    5394 1y69:K (3.33) BS01 rna ? GO:0000049 ... Q9RXJ5 15616575 PDBbind: Kd=0.52uM
    5395 1y69:K (3.33) BS02 rna ? GO:0000049 ... Q9RXJ5 15616575 PDBbind: Kd=0.52uM
    5396 1y69:U (3.33) BS01 rna ? GO:0000049 ... Q9RY65 15616575 PDBbind: Kd=0.52uM
    5397 1y6a:A (2.1) BS01 AAZ 2.7.10.1 GO:0004672 ... P35968 15743202 MOAD: ic50=0.022uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=22nM
    5398 1y6b:A (2.1) BS01 AAX 2.7.10.1 GO:0004672 ... P35968 15743202 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38nM
    BindingDB: IC50=38nM
    5399 1y6q:A (2.2) BS01 TDI 3.2.2.9 GO:0003824 ... P0AF12 15746096 MOAD: Ki=2pM
    PDBbind: -logKd/Ki=11.70, Ki=2pM
    BindingDB: Kd=0.002nM, Ki=0.048nM
    5400 1y6q:B (2.2) BS01 TDI 3.2.2.9 GO:0003824 ... P0AF12 15746096 MOAD: Ki=2pM
    PDBbind: -logKd/Ki=11.70, Ki=2pM
    BindingDB: Kd=0.002nM, Ki=0.048nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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