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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4401 1tkx:A (2.85) BS01 GWB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537347 PDBbind: -logKd/Ki=7.54, IC50=29nM
    4402 1tkz:A (2.81) BS01 H16 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    4403 1tl1:A (2.9) BS01 H18 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    4404 1tl3:A (2.8) BS01 H20 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    4405 1tl7:A (2.8) BS04 ONM 4.6.1.1 GO:0009190 ... P30803 15591060 PDBbind: -logKd/Ki=7.92, Ki=12nM
    4406 1tl7:B (2.8) BS02 ONM 4.6.1.1 GO:0009190 ... P26769 15591060 PDBbind: -logKd/Ki=7.92, Ki=12nM
    4407 1tlc:A (2.1) BS01 DGP 2.1.1.45 GO:0000287 ... P0A884 7724588 MOAD: Kd=0.076uM
    4408 1tlc:A (2.1) BS03 DGP 2.1.1.45 GO:0000287 ... P0A884 7724588 MOAD: Kd=0.076uM
    4409 1tlc:B (2.1) BS01 DGP 2.1.1.45 GO:0000287 ... P0A884 7724588 MOAD: Kd=0.076uM
    4410 1tlc:B (2.1) BS02 DGP 2.1.1.45 GO:0000287 ... P0A884 7724588 MOAD: Kd=0.076uM
    4411 1tlg:A (2.2) BS01 GAL ? GO:0030246 ... P16108 10398588 MOAD: Kd=0.44mM
    4412 1tlg:B (2.2) BS01 GAL ? GO:0030246 ... P16108 10398588 MOAD: Kd=0.44mM
    4413 1tlo:A (1.9) BS03 E64 3.4.22.52 GO:0004198 ... P97571 15491615 PDBbind: -logKd/Ki=4.00, IC50=100uM
    4414 1tlp:E (2.3) BS01 RDF 3.4.24.27 GO:0004222 ... P00800 3709536 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    BindingDB: Kd=28nM, IC50=33nM, Ki=28nM
    4415 1tmm:A (1.25) BS04 APC 2.7.6.3 GO:0000287 ... P26281 15952765 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    4416 1tmm:A (1.25) BS05 HHR 2.7.6.3 GO:0000287 ... P26281 15952765 MOAD: Kd=1.1uM
    4417 1tmm:B (1.25) BS03 APC 2.7.6.3 GO:0000287 ... P26281 15952765 MOAD: Kd=0.23uM
    4418 1tmm:B (1.25) BS04 HHR 2.7.6.3 GO:0000287 ... P26281 15952765 MOAD: Kd=1.1uM
    4419 1tmn:E (1.9) BS01 0ZN 3.4.24.27 GO:0004222 ... P00800 6395881 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    4420 1tng:A (1.8) BS02 AMC 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=1.17mM
    PDBbind: -logKd/Ki=2.93, Ki=1.17mM
    4421 1tnh:A (1.8) BS02 FBA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=0.43mM
    PDBbind: -logKd/Ki=3.37, Ki=0.43mM
    4422 1tni:A (1.9) BS02 PBN 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=0.1mM
    PDBbind: -logKd/Ki=4.00, Ki=0.10mM
    4423 1tnj:A (1.8) BS02 PEA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=11mM
    PDBbind: -logKd/Ki=1.96, Ki=11.0mM
    4424 1tnk:A (1.8) BS02 PRA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=32.5mM
    PDBbind: -logKd/Ki=1.49, Ki=32.5mM
    4425 1tnl:A (1.9) BS02 TPA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=13.3mM
    PDBbind: -logKd/Ki=1.88, Ki=13.3mM
    4426 1tog:A (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    4427 1tog:B (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    4428 1tog:B (2.31) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    4429 1toi:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.09mM
    PDBbind: -logKd/Ki=4.05, Kd=0.090mM
    4430 1toj:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.41mM
    PDBbind: -logKd/Ki=3.39, Kd=0.41mM
    4431 1tom:H (1.8) BS03 MIN 3.4.21.5 GO:0004252 ... P00734 N/A MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=5nM, IC50=6nM
    4432 1tou:A (2.0) BS01 B1V ? GO:0005324 ... P15090 15357970 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    4433 1tow:A (2.0) BS01 CRZ ? GO:0005324 ... P15090 15357969 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    BindingDB: IC50=570.0nM
    4434 1tox:A (2.3) BS01 NAD 2.4.2.36 GO:0005576 ... P00588 8573568 MOAD: Kd=10uM
    4435 1tox:B (2.3) BS01 NAD 2.4.2.36 GO:0005576 ... P00588 8573568 MOAD: Kd=10uM
    4436 1tpw:A (1.9) BS01 PGH 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    4437 1tpw:B (1.9) BS01 PGH 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    4438 1tpz:A (2.0) BS01 GDP 3.6.5.- GO:0003924 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    PDBbind: -logKd/Ki=6.19, Kd=0.64uM
    4439 1tpz:B (2.0) BS01 GDP 3.6.5.- GO:0003924 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    4440 1tq4:A (1.95) BS01 GDP 3.6.5.- GO:0003924 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    PDBbind: -logKd/Ki=6.19, Kd=0.64uM
    4441 1tqe:P (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4442 1tqe:P (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4443 1tqe:Q (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4444 1tqe:Q (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4445 1tqe:R (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4446 1tqe:R (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4447 1tqe:S (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4448 1tqe:S (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    4449 1tqf:A (1.8) BS01 32P 3.4.23.46 GO:0004190 ... P56817 15566281 MOAD: ic50=1.4uM
    PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1400nM
    4450 1tqt:A (1.9) BS02 SSD 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    4451 1tqu:A (2.03) BS02 GHA 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    4452 1tqv:A (2.03) BS02 SSE 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    4453 1tqw:A (1.2) BS02 BLT 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50~7.5mM
    4454 1tr7:A (2.1) BS01 DEG ? GO:0007155 ... P08191 15659162 MOAD: Kd=0.15uM
    4455 1tr7:B (2.1) BS01 DEG ? GO:0007155 ... P08191 15659162 MOAD: Kd=0.15uM
    PDBbind: -logKd/Ki=6.82, Kd=0.15uM
    4456 1trd:B (2.5) BS01 PGH 5.3.1.1 GO:0004807 ... P04789 8356028 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4uM
    4457 1tsd:A (1.95) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 8846221 MOAD: Kd=0.04uM
    4458 1tsd:A (1.95) BS03 UMP 2.1.1.45 GO:0000287 ... P0A884 8846221 MOAD: Kd=0.04uM
    4459 1tsd:B (1.95) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 8846221 MOAD: Kd=0.04uM
    4460 1tsd:B (1.95) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 8846221 MOAD: Kd=0.04uM
    4461 1tsi:A (2.84) BS01 4PB 5.3.1.1 GO:0004807 ... P04789 1304889 PDBbind: -logKd/Ki=3.48, Ki=0.33mM
    4462 1tsl:A (2.5) BS01 A15 2.1.1.45 GO:0004799 ... P00469 9931028 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    BindingDB: Ki=700nM
    4463 1tsm:A (3.0) BS01 MR2 2.1.1.45 GO:0004799 ... P00469 9931028 PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    4464 1tsv:A (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9053905 PDBbind: -logKd/Ki=4.80, Kd=16.0uM
    4465 1tsy:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9053905 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    4466 1tt1:A (1.93) BS01 KAI ? GO:0015276 ... P42260 15721240 MOAD: Ki=64.6nM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    BindingDB: Ki=12.7nM, Kd=39nM, EC50=1800nM
    4467 1tt1:B (1.93) BS01 KAI ? GO:0015276 ... P42260 15721240 MOAD: Ki=64.6nM
    BindingDB: Ki=12.7nM, Kd=39nM, EC50=1800nM
    4468 1ttm:A (1.95) BS02 667 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15453828 MOAD: Kd=45nM
    PDBbind: -logKd/Ki=7.35, Kd=45nM
    BindingDB: IC50=25nM, Ki=21nM, Kd=45nM
    4469 1ttv:A (-1.00) BS01 IMY 2.3.2.27 GO:0005634 ... P56273 15557803 PDBbind: -logKd/Ki=6.80, IC50=160nM
    4470 1tu6:A (1.75) BS01 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    4471 1tu6:B (1.75) BS01 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    4472 1tu6:B (1.75) BS02 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    4473 1tuf:A (2.4) BS01 AZ1 4.1.1.20 GO:0003824 ... Q58497 12429091 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    4474 1tuf:B (2.4) BS01 AZ1 4.1.1.20 GO:0003824 ... Q58497 12429091 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    4475 1tv5:A (2.4) BS01 A26 1.3.5.2 GO:0004152 ... Q08210 16510978 MOAD: Ki~1000nM
    BindingDB: IC50=190546nM
    4476 1tv6:A (2.8) BS01 CP9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15249669 PDBbind: -logKd/Ki=5.40, IC50=4uM
    4477 1tve:A (3.0) BS01 178 1.1.1.3 GO:0004412 ... P31116 15210149 PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    4478 1tvo:A (2.5) BS01 FRZ 2.7.11.24 GO:0000165 ... P28482 16139248 MOAD: Ki=0.14uM
    PDBbind: -logKd/Ki=6.85, Ki=0.14uM
    BindingDB: Ki=310nM, IC50=1200nM, Kd=850nM
    4479 1tvr:A (3.0) BS01 TB9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 9000632 PDBbind: -logKd/Ki=7.48, IC50=33nM
    4480 1tw8:A (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4481 1tw8:A (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4482 1tw8:B (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4483 1tw8:B (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4484 1tw8:C (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4485 1tw8:C (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4486 1tw8:D (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4487 1tw8:D (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    4488 1tx7:A (1.75) BS02 4CM 3.4.21.4 GO:0004175 ... P00760 11738605 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    4489 1tx8:A (1.7) BS02 AM4 3.4.21.4 GO:0004175 ... P00760 15380220 MOAD: Ki=1800uM
    4490 1txf:A (2.1) BS01 GLU ? GO:0015276 ... P22756 15721240 MOAD: Ki=57.2nM
    4491 1txr:A (2.0) BS03 BES 3.4.11.10 GO:0006508 ... Q01693 15274616 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: IC50=1.6nM, Ki=1.6nM
    4492 1tyn:A (2.0) BS01 CTA 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    4493 1tyr:A (1.8) BS01 9CR ? GO:0005179 ... P02766 8536704 MOAD: Kd=0.1uM
    4494 1tyr:B (1.8) BS01 9CR ? GO:0005179 ... P02766 8536704 MOAD: Kd=0.1uM
    4495 1tys:A (1.8) BS01 TMP 2.1.1.45 GO:0000287 ... P0A884 8312270 PDBbind: -logKd/Ki=5.49, Kd=3.27uM
    4496 1tys:A (1.8) BS02 DHF 2.1.1.45 GO:0000287 ... P0A884 8312270 MOAD: Kd=3.27uM
    4497 1u0b:B (2.3) BS01 rna 6.1.1.16 GO:0000166 ... P21888 15489861 PDBbind: Kd=0.27uM
    4498 1u0c:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    4499 1u0c:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    4500 1u0c:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    4501 1u0c:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    4502 1u0d:A (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    4503 1u0d:A (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    4504 1u0d:B (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    4505 1u0d:B (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    4506 1u0g:A (1.7) BS01 E4P 5.3.1.9 GO:0001701 ... P06745 15342241 PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    4507 1u0g:B (1.7) BS01 E4P 5.3.1.9 GO:0001701 ... P06745 15342241 PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    4508 1u0h:A (2.9) BS04 ONM 4.6.1.1 GO:0009190 ... P30803 15591060 PDBbind: -logKd/Ki=6.96, Ki=110nM
    4509 1u0h:B (2.9) BS01 ONM 4.6.1.1 GO:0009190 ... P26769 15591060 PDBbind: -logKd/Ki=6.96, Ki=110nM
    4510 1u1b:A (2.0) BS01 PAX 4.6.1.18 GO:0003676 ... P61823 15969595 MOAD: Kd=16nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    4511 1u1b:B (2.0) BS01 PAX 4.6.1.18 GO:0003676 ... P61823 15969595 MOAD: Kd=16nM
    4512 1u1c:A (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4513 1u1c:A (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4514 1u1c:B (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4515 1u1c:B (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4516 1u1c:C (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4517 1u1c:C (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4518 1u1c:D (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4519 1u1c:D (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4520 1u1c:E (2.2) BS02 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4521 1u1c:E (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4522 1u1c:F (2.2) BS01 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4523 1u1c:F (2.2) BS03 BAU 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~4300nM
    4524 1u1f:A (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4525 1u1f:A (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4526 1u1f:B (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4527 1u1f:B (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4528 1u1f:C (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4529 1u1f:C (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4530 1u1f:D (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4531 1u1f:D (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4532 1u1f:E (2.3) BS02 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4533 1u1f:E (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4534 1u1f:F (2.3) BS01 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4535 1u1f:F (2.3) BS03 183 2.4.2.3 GO:0003824 ... P12758 15983408 MOAD: Ki~680nM
    4536 1u1k:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=319nM
    4537 1u1l:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=107nM
    4538 1u1m:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=296nM
    4539 1u1n:A (2.1) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=316nM
    4540 1u1o:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=59nM
    4541 1u1p:A (1.9) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=209nM
    4542 1u1q:A (1.8) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=76nM
    4543 1u1r:A (1.8) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=229nM
    4544 1u1w:A (1.35) BS01 3HA 5.3.3.17 GO:0002047 ... Q51792 15545603 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    4545 1u1w:B (1.35) BS01 3HA 5.3.3.17 GO:0002047 ... Q51792 15545603 MOAD: Kd=1.4uM
    4546 1u21:A (1.69) BS01 P2C ? GO:0005179 ... P02766 15826192 MOAD: Kd=5nM
    4547 1u21:B (1.69) BS01 P2C ? GO:0005179 ... P02766 15826192 MOAD: Kd=5nM
    4548 1u2r:A (2.6) BS03 GDP 3.6.5.- GO:0003746 ... P32324 15316019 PDBbind: -logKd/Ki=5.41, Kd=3.9uM
    4549 1u2y:A (1.95) BS02 GOX 3.2.1.1 GO:0003824 ... P04746 15304511 MOAD: Ki=18mM
    PDBbind: -logKd/Ki=1.74, Ki=18mM
    4550 1u30:A (1.9) BS03 GOX 3.2.1.1 GO:0003824 ... P04746 15304511 MOAD: Ki=1.8mM
    4551 1u32:A (2.0) BS03 OKA 3.1.3.16 GO:0000070 ... P36873 15280359 MOAD: ic50=97nM
    PDBbind: -logKd/Ki=7.01, IC50=97nM
    BindingDB: IC50=>5000nM
    4552 1u33:A (1.95) BS01 LM2 3.2.1.1 GO:0003824 ... P04746 15304511 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    4553 1u3d:A (2.45) BS05 ANP ? GO:0009785 ... Q43125 15299148 MOAD: Kd=75uM
    4554 1u3q:A (2.4) BS01 272 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    BindingDB: IC50=3.5nM
    4555 1u3q:B (2.4) BS01 272 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=3.5nM
    BindingDB: IC50=3.5nM
    4556 1u3q:C (2.4) BS01 272 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=3.5nM
    BindingDB: IC50=3.5nM
    4557 1u3q:D (2.4) BS01 272 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=3.5nM
    BindingDB: IC50=3.5nM
    4558 1u3r:A (2.21) BS02 338 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    4559 1u3r:B (2.21) BS02 338 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=5nM
    BindingDB: IC50=5nM
    4560 1u3s:A (2.5) BS02 797 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    4561 1u3s:B (2.5) BS02 797 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=1.4nM
    BindingDB: IC50=1.4nM
    4562 1u3t:A (2.49) BS04 CCB 1.1.1.1 GO:0004022 ... P07327 15449945 MOAD: Ki=0.36uM
    BindingDB: Ki=360nM
    4563 1u3t:B (2.49) BS04 CCB 1.1.1.1 GO:0004022 ... P07327 15449945 MOAD: Ki=0.36uM
    BindingDB: Ki=360nM
    4564 1u3u:A (1.6) BS04 BNF 1.1.1.105 GO:0001523 ... P00325 15449945 MOAD: Ki=0.33uM
    BindingDB: Ki=330nM
    4565 1u3u:B (1.6) BS04 BNF 1.1.1.105 GO:0001523 ... P00325 15449945 MOAD: Ki=0.33uM
    BindingDB: Ki=330nM
    4566 1u3v:A (1.65) BS04 HPL 1.1.1.105 GO:0001523 ... P00325 15449945 MOAD: Ki=0.33uM
    BindingDB: Ki=330nM
    4567 1u3v:B (1.65) BS04 HPL 1.1.1.105 GO:0001523 ... P00325 15449945 MOAD: Ki=0.33uM
    BindingDB: Ki=330nM
    4568 1u3w:A (1.45) BS04 FXY 1.1.1.1 GO:0004022 ... P00326 15449945 MOAD: Ki=0.41uM
    BindingDB: Ki=410nM
    4569 1u3w:B (1.45) BS04 FXY 1.1.1.1 GO:0004022 ... P00326 15449945 MOAD: Ki=0.41uM
    BindingDB: Ki=410nM
    4570 1u59:A (2.3) BS01 STU 2.7.10.2 GO:0004672 ... P43403 15292186 MOAD: ic50=55.8nM
    PDBbind: -logKd/Ki=7.25, IC50=55.8nM
    4571 1u63:A (3.4) BS01 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    4572 1u63:A (3.4) BS02 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    4573 1u63:C (3.4) BS01 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    4574 1u63:C (3.4) BS02 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    4575 1u65:A (2.61) BS02 CP0 3.1.1.7 GO:0001507 ... P04058 15772291 PDBbind: -logKd/Ki=7.58, Ki=26.4nM
    BindingDB: Ki=26nM
    4576 1u6p:A (-1.00) BS01 rna ? GO:0003676 ... P03332 15457265 PDBbind: Kd=75nM
    4577 1u6q:A (2.02) BS01 745 3.4.21.73 GO:0004252 ... P00749 15582418 PDBbind: -logKd/Ki=5.88, Ki=1.31uM
    BindingDB: Ki=1259nM
    4578 1u70:A (2.5) BS01 MTX 1.5.1.3 GO:0003723 ... P00375 15681865 MOAD: Ki=230nM
    BindingDB: IC50=25nM, Ki=0.006000nM
    4579 1u71:A (2.2) BS01 MXA 1.5.1.3 GO:0000900 ... P00374 15681865 PDBbind: -logKd/Ki=7.48, Ki=33nM
    BindingDB: IC50=0.61nM, Ki=0.025nM
    4580 1u72:A (1.9) BS02 MTX 1.5.1.3 GO:0000900 ... P00374 15681865 MOAD: Kd=0.0034nM
    BindingDB: IC50=22nM, Kd=0.194984nM, Ki=4420nM, EC50=13.3nM
    4581 1u7t:A (2.0) BS01 TDT 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62    		 GO:0000049 ... Q99714 15342248 MOAD: ic50=92nM
    4582 1u7t:B (2.0) BS01 NAD 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62    		 GO:0000049 ... Q99714 15342248 MOAD: Ki=425uM
    4583 1u7t:C (2.0) BS01 TDT 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62    		 GO:0000049 ... Q99714 15342248 MOAD: ic50=92nM
    4584 1u7t:D (2.0) BS01 TDT 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62    		 GO:0000049 ... Q99714 15342248 MOAD: ic50=92nM
    4585 1u9e:A (2.4) BS02 397 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=6nM
    4586 1u9e:B (2.4) BS02 397 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=5.7nM
    BindingDB: IC50=6nM
    4587 1u9q:X (2.3) BS01 186 3.4.22.51 GO:0006508 ... P25779 15727867 MOAD: Ki=1102.9nM
    PDBbind: -logKd/Ki=8.33, IC50=4.7nM
    4588 1u9v:A (2.2) BS01 IHE 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6nM
    4589 1u9w:A (2.3) BS01 IHI 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    BindingDB: IC50=3.5nM
    4590 1u9x:A (2.1) BS01 IHJ 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    4591 1ua4:A (1.9) BS03 AMP 2.7.1.-
    2.7.1.147    		 GO:0000287 ... Q9V2Z6 12909015 MOAD: Ki~0.06mM
    PDBbind: -logKd/Ki=4.22, Ki=0.06mM
    4592 1uad:A (2.1) BS02 GNP 3.6.5.2 GO:0003924 ... P11233 12839989 MOAD: Ka=7260000M^-1
    4593 1uad:B (2.1) BS02 GNP 3.6.5.2 GO:0003924 ... P11233 12839989 MOAD: Ka=7260000M^-1
    4594 1ucn:A (2.0) BS03 ADP 2.7.4.6 GO:0000287 ... P15531 12972261 MOAD: Kd=6uM
    PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    4595 1ucn:B (2.0) BS02 ADP 2.7.4.6 GO:0000287 ... P15531 12972261 MOAD: Kd=6uM
    PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    4596 1ucn:C (2.0) BS02 ADP 2.7.4.6 GO:0000287 ... P15531 12972261 MOAD: Kd=6uM
    4597 1uda:A (1.8) BS02 UFG 5.1.3.2 GO:0003978 ... P09147 9174344 MOAD: Ki=1.4mM
    4598 1udb:A (1.65) BS02 UFG 5.1.3.2 GO:0003978 ... P09147 9174344 MOAD: Ki=1.2mM
    4599 1udt:A (2.3) BS02 VIA 3.1.4.35 GO:0004114 ... O76074 12955149 MOAD: Kd~0.5nM
    PDBbind: -logKd/Ki=9.30, Kd=0.5nM
    BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    4600 1udu:A (2.83) BS02 CIA 3.1.4.35 GO:0004114 ... O76074 12955149 PDBbind: -logKd/Ki=9.05, Kd=0.9nM
    BindingDB: IC50=4nM, Ki=10nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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