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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3601 1pzj:D (1.46) BS01 15B ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    PDBbind: -logKd/Ki=3.49, IC50=0.32mM
    3602 1pzj:D (1.46) BS02 15B ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    PDBbind: -logKd/Ki=3.49, IC50=0.32mM
    3603 1pzj:E (1.46) BS01 J15 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    3604 1pzj:F (1.46) BS01 J15 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    3605 1pzj:G (1.46) BS02 15B ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    3606 1pzj:H (1.46) BS01 15B ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.32mM
    3607 1pzk:D (1.35) BS01 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3608 1pzk:D (1.35) BS02 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3609 1pzk:E (1.35) BS01 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3610 1pzk:F (1.35) BS01 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3611 1pzk:G (1.35) BS01 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3612 1pzk:H (1.35) BS01 J12 ? GO:0005576 ... Q57193 14980603 MOAD: ic50=0.2mM
    3613 1pzo:A (1.9) BS01 CBT 3.5.2.6 GO:0005515 ... P62593 15037085 MOAD: Ki=460uM
    PDBbind: -logKd/Ki=3.32, Ki=480uM
    3614 1pzo:A (1.9) BS02 CBT 3.5.2.6 GO:0005515 ... P62593 15037085 MOAD: Ki=460uM
    PDBbind: -logKd/Ki=3.32, Ki=480uM
    3615 1pzp:A (1.45) BS01 FTA 3.5.2.6 GO:0005515 ... P62593 15037085 MOAD: Ki=480uM
    PDBbind: -logKd/Ki=3.31, Ki=490uM
    3616 1pzp:A (1.45) BS02 FTA 3.5.2.6 GO:0005515 ... P62593 15037085 MOAD: Ki=480uM
    PDBbind: -logKd/Ki=3.31, Ki=490uM
    3617 1q0b:A (1.9) BS02 NAT ? GO:0003777 ... P52732 14672662 MOAD: ic50=6.7uM
    PDBbind: -logKd/Ki=5.17, IC50=6.7uM
    BindingDB: IC50=10000nM
    3618 1q0b:B (1.9) BS02 NAT ? GO:0003777 ... P52732 14672662 MOAD: ic50=6.7uM
    BindingDB: IC50=10000nM
    3619 1q0h:A (2.2) BS01 FOM 1.1.1.267 GO:0008299 ... P45568 15567415 MOAD: Ki~21nM
    BindingDB: IC50=30nM
    3620 1q0l:A (2.65) BS01 FOM 1.1.1.267 GO:0008299 ... P45568 15567415 BindingDB: IC50=30nM
    3621 1q0y:H (2.0) BS01 MOI ? N/A Q9D9B8 15019787 MOAD: Kd~1nM
    3622 1q1g:A (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    3623 1q1g:B (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    3624 1q1g:B (2.02) BS02 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    3625 1q1g:C (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3626 1q1g:C (2.02) BS02 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3627 1q1g:D (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3628 1q1g:D (2.02) BS02 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3629 1q1g:E (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3630 1q1g:F (2.02) BS01 MTI 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=2.7nM
    3631 1q1m:A (2.6) BS01 234 3.1.3.48 GO:0004725 ... P18031 13678400 PDBbind: -logKd/Ki=5.16, Ki=6.9uM
    BindingDB: Ki=6900nM, IC50=110000nM
    3632 1q1y:A (1.9) BS02 BB2 3.5.1.88 GO:0006412 ... P68826 15382235 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=<5nM
    3633 1q2o:A (1.74) BS04 DP1 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=9.5uM
    3634 1q2o:B (1.74) BS05 DP1 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=9.5uM
    3635 1q3d:A (2.2) BS01 STU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    3636 1q3d:B (2.2) BS01 STU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    3637 1q3w:A (2.3) BS01 ATU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=4nM
    BindingDB: IC50=4nM
    3638 1q3w:B (2.3) BS01 ATU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4nM
    3639 1q41:A (2.1) BS01 IXM 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=22nM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=200nM
    3640 1q41:B (2.1) BS01 IXM 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 MOAD: ic50=22nM
    BindingDB: IC50=200nM
    3641 1q4g:A (2.0) BS02 BFL 1.14.99.1 GO:0001516 ... P05979 14672659 BindingDB: IC50=32nM, Ki=130nM
    3642 1q4g:B (2.0) BS01 BFL 1.14.99.1 GO:0001516 ... P05979 14672659 BindingDB: IC50=32nM, Ki=130nM
    3643 1q4l:A (2.77) BS01 679 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 PDBbind: -logKd/Ki=7.40, Kd=40nM
    BindingDB: IC50=76nM
    3644 1q4l:B (2.77) BS01 679 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 14529625 BindingDB: IC50=76nM
    3645 1q4t:A (1.6) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    3646 1q4t:A (1.6) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    3647 1q4t:B (1.6) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    3648 1q4t:B (1.6) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.003uM
    3649 1q4u:A (1.6) BS01 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.6uM
    3650 1q4u:A (1.6) BS02 4CA 3.1.2.23 GO:0005829 ... Q04416 12907670 MOAD: Ki=0.6uM
    3651 1q4w:A (1.93) BS02 DQU 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=0.35uM
    PDBbind: -logKd/Ki=6.46, Ki=0.35uM
    3652 1q4x:A (2.8) BS01 G24 ? GO:0003677 ... P10828 14673100 PDBbind: -logKd/Ki=9.48, Kd=0.33nM
    3653 1q54:A (1.93) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 12630859 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3654 1q54:B (1.93) BS03 BHI 5.3.3.2 GO:0000287 ... Q46822 12630859 MOAD: Ki=1.4uM
    3655 1q5k:A (1.94) BS01 TMU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 12928438 MOAD: Ki=38nM
    PDBbind: -logKd/Ki=7.42, Ki=38nM
    BindingDB: IC50=104nM, Ki=38nM
    3656 1q5k:B (1.94) BS01 TMU 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 12928438 MOAD: Ki=38nM
    BindingDB: IC50=104nM, Ki=38nM
    3657 1q63:A (1.85) BS02 AIQ 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3658 1q65:A (2.1) BS02 BHB 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=3.5uM
    PDBbind: -logKd/Ki=5.46, Ki=3.5uM
    3659 1q66:A (1.75) BS02 KMB 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    3660 1q6j:A (2.2) BS01 335 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    BindingDB: IC50=16nM
    3661 1q6k:A (2.1) BS01 TCO 3.4.22.38 GO:0006508 ... P43235 14684342 MOAD: ic50=26nM
    PDBbind: -logKd/Ki=7.59, IC50=26nM
    BindingDB: IC50=26nM
    3662 1q6m:A (2.2) BS01 P27 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    BindingDB: IC50=120nM
    3663 1q6n:A (2.1) BS01 P90 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    3664 1q6n:A (2.1) BS02 P90 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    3665 1q6n:B (2.1) BS01 P90 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.023uM
    3666 1q6n:B (2.1) BS02 P90 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=0.023uM
    3667 1q6p:A (2.3) BS01 213 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    3668 1q6p:A (2.3) BS02 213 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    3669 1q6p:B (2.3) BS01 213 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=3nM
    BindingDB: IC50=3nM
    3670 1q6p:B (2.3) BS02 213 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=3nM
    BindingDB: IC50=3nM
    3671 1q6s:A (2.2) BS01 214 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=220nM
    3672 1q6s:A (2.2) BS02 214 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=220nM
    3673 1q6s:B (2.2) BS01 214 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=12nM
    BindingDB: IC50=220nM
    3674 1q6s:B (2.2) BS02 214 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=12nM
    BindingDB: IC50=220nM
    3675 1q6t:A (2.3) BS01 600 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5340nM
    3676 1q6t:A (2.3) BS02 600 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5340nM
    3677 1q6t:B (2.3) BS01 600 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=5nM
    BindingDB: IC50=5340nM
    3678 1q6t:B (2.3) BS02 600 3.1.3.48 GO:0004725 ... P18031 14516196 MOAD: ic50=5nM
    BindingDB: IC50=5340nM
    3679 1q72:H (1.7) BS01 COC N/A N/A N/A 15885702 MOAD: Kd=0.0000123M
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    3680 1q72:L (1.7) BS01 COC N/A N/A N/A 15885702 PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    3681 1q7a:A (1.6) BS02 OPB 3.1.1.4 GO:0004623 ... P59071 15544328 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.19, Kd=64nM
    3682 1q7b:A (2.05) BS02 NAP 1.1.1.100 GO:0004316 ... P0AEK2 15016358 MOAD: Kd=3.5uM
    3683 1q7b:B (2.05) BS03 NAP 1.1.1.100 GO:0004316 ... P0AEK2 15016358 MOAD: Kd=3.5uM
    3684 1q7b:C (2.05) BS02 NAP 1.1.1.100 GO:0004316 ... P0AEK2 15016358 MOAD: Kd=3.5uM
    3685 1q7b:D (2.05) BS02 NAP 1.1.1.100 GO:0004316 ... P0AEK2 15016358 MOAD: Kd=3.5uM
    3686 1q83:A (2.65) BS01 TZ5 3.1.1.7 GO:0004104 ... P21836 14757816 PDBbind: -logKd/Ki=12.39, Ki=410fM
    BindingDB: Ki=0.410nM, Kd=0.00041nM
    3687 1q83:B (2.65) BS01 TZ5 3.1.1.7 GO:0004104 ... P21836 14757816 BindingDB: Ki=0.410nM, Kd=0.00041nM
    3688 1q84:A (2.45) BS01 TZ4 3.1.1.7 GO:0004104 ... P21836 14757816 MOAD: Ki=8900fM
    PDBbind: -logKd/Ki=11.05, Ki=8900fM
    3689 1q84:B (2.45) BS01 TZ4 3.1.1.7 GO:0004104 ... P21836 14757816 MOAD: Ki=8900fM
    3690 1q8t:A (2.0) BS02 Y27 2.7.11.11 GO:0001669 ... P00517 14656443 MOAD: Kd=17.5uM
    PDBbind: -logKd/Ki=4.76, Kd=17.5uM
    BindingDB: IC50=42000nM
    3691 1q8u:A (1.9) BS02 H52 2.7.11.11 GO:0001669 ... P00517 14656443 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    BindingDB: IC50=394nM
    3692 1q8u:A (1.9) BS03 H52 2.7.11.11 GO:0001669 ... P00517 14656443 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    BindingDB: IC50=394nM
    3693 1q8w:A (2.2) BS02 M77 2.7.11.11 GO:0001669 ... P00517 14656443 MOAD: Kd=5.7uM
    PDBbind: -logKd/Ki=5.24, Kd=5.7uM
    BindingDB: IC50=1494nM
    3694 1q91:A (1.6) BS03 DPB 3.1.3.- GO:0008253 ... Q9NPB1 15044615 MOAD: Ki=70uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    3695 1q95:A (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    3696 1q95:B (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    3697 1q95:B (2.46) BS02 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    3698 1q95:C (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3699 1q95:C (2.46) BS02 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3700 1q95:D (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3701 1q95:E (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3702 1q95:E (2.46) BS02 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3703 1q95:F (2.46) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3704 1q95:F (2.46) BS02 PAL 2.1.3.2 GO:0004070 ... P0A786 15157075 MOAD: Ki=27nM
    3705 1q9d:A (2.35) BS06 OI1 3.1.3.11 GO:0005737 ... P00636 14530289 MOAD: ic50=1.87uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    3706 1q9d:A (2.35) BS07 OI1 3.1.3.11 GO:0005737 ... P00636 14530289 MOAD: ic50=1.87uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    3707 1q9d:B (2.35) BS01 OI1 3.1.3.11 GO:0005737 ... P00636 14530289 MOAD: ic50=1.87uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    3708 1q9d:B (2.35) BS07 OI1 3.1.3.11 GO:0005737 ... P00636 14530289 MOAD: ic50=1.87uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    3709 1q9m:A (2.3) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, IC50=0.33uM
    3710 1q9m:B (2.3) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.33uM
    3711 1q9m:C (2.3) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.33uM
    3712 1q9m:D (2.3) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.33uM
    3713 1q9x:A (2.69) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3714 1q9x:A (2.69) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3715 1q9x:A (2.69) BS03 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3716 1q9x:B (2.69) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3717 1q9x:B (2.69) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3718 1q9x:C (2.69) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3719 1q9x:C (2.69) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3720 1q9x:D (2.69) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3721 1q9x:D (2.69) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    3722 1q9y:A (2.8) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=20uM
    3723 1q9y:A (2.8) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=20uM
    3724 1qan:A (2.4) BS01 SAH 2.1.1.184 GO:0000154 ... P13956 10366505 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    3725 1qaq:A (2.8) BS01 SFG 2.1.1.184 GO:0000154 ... P13956 10366505 PDBbind: -logKd/Ki=4.74, Ki=18uM
    3726 1qaw:A (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3727 1qaw:A (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3728 1qaw:B (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3729 1qaw:B (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3730 1qaw:C (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3731 1qaw:C (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3732 1qaw:D (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3733 1qaw:D (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3734 1qaw:E (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3735 1qaw:E (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3736 1qaw:G (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3737 1qaw:G (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3738 1qaw:H (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3739 1qaw:H (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3740 1qaw:I (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3741 1qaw:I (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3742 1qaw:J (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3743 1qaw:J (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    3744 1qaw:K (2.5) BS01 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3745 1qaw:K (2.5) BS02 TRP ? GO:0003723 ... Q9X6J6 10369778 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    3746 1qb1:A (1.8) BS02 974 3.4.21.4 GO:0004175 ... P00760 10417407 MOAD: Ki=170nM
    PDBbind: -logKd/Ki=6.77, Ki=170nM
    3747 1qb6:A (1.8) BS02 623 3.4.21.4 GO:0004175 ... P00760 10417407 MOAD: Ki=870nM
    PDBbind: -logKd/Ki=6.06, Ki=870nM
    3748 1qb9:A (1.8) BS03 806 3.4.21.4 GO:0004175 ... P00760 10417407 MOAD: Ki=36nM
    PDBbind: -logKd/Ki=7.44, Ki=36nM
    BindingDB: Ki=36nM
    3749 1qbn:A (1.8) BS03 688 3.4.21.4 GO:0004175 ... P00760 10417407 MOAD: Ki=1400nM
    PDBbind: -logKd/Ki=5.85, Ki=1400nM
    3750 1qbo:A (1.8) BS03 711 3.4.21.4 GO:0004175 ... P00760 10417407 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    3751 1qbq:B (2.4) BS03 HFP 2.5.1.58 GO:0003824 ... Q02293 9843427 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    3752 1qbr:A (1.8) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 MOAD: Ki=0.027nM
    PDBbind: -logKd/Ki=10.57, Ki=0.027nM
    3753 1qbr:B (1.8) BS01 XV6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 PDBbind: -logKd/Ki=10.57, Ki=0.027nM
    3754 1qbs:A (1.8) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8784449 MOAD: Ki=0.34nM
    PDBbind: -logKd/Ki=9.47, Ki=0.34nM
    3755 1qbs:B (1.8) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8784449 PDBbind: -logKd/Ki=9.47, Ki=0.34nM
    3756 1qbt:A (2.1) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 PDBbind: -logKd/Ki=10.62, Ki=0.024nM
    3757 1qbt:B (2.1) BS01 146 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 MOAD: Ki=0.024nM
    PDBbind: -logKd/Ki=10.62, Ki=0.024nM
    3758 1qbu:A (1.8) BS01 846 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 PDBbind: -logKd/Ki=10.24, Ki=0.058nM
    3759 1qbu:B (1.8) BS01 846 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9003516 MOAD: Ki=0.058nM
    PDBbind: -logKd/Ki=10.24, Ki=0.058nM
    3760 1qbv:H (1.8) BS03 PPX 3.4.21.5 GO:0004252 ... P00734 9622548 MOAD: Ki=4100nM
    PDBbind: -logKd/Ki=5.39, Ki=4100nM
    BindingDB: Ki=4100nM
    3761 1qca:A (2.2) BS02 FUA 2.3.1.28 GO:0008811 ... P00484 7500366 MOAD: Ki=5.4uM
    PDBbind: -logKd/Ki=5.27, Ki=5.4uM
    3762 1qcp:A (1.8) BS02 RWJ 3.4.21.4 GO:0004175 ... P00760 10531473 PDBbind: -logKd/Ki=7.52, Ki=30nM
    3763 1qds:A (2.0) BS01 PGA 5.3.1.1 GO:0004807 ... P48499 10785370 MOAD: Ki=0.048mM
    3764 1qf0:A (2.2) BS06 TI2 3.4.24.27 GO:0004222 ... P00800 10504225 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    3765 1qf1:A (2.0) BS06 TI1 3.4.24.27 GO:0004222 ... P00800 10504225 MOAD: Ki=48nM
    PDBbind: -logKd/Ki=7.32, Ki=48nM
    3766 1qf2:A (2.06) BS06 TI3 3.4.24.27 GO:0004222 ... P00800 10504225 MOAD: Ki=1200nM
    PDBbind: -logKd/Ki=5.92, Ki=1200nM
    3767 1qf4:A (2.2) BS04 RPD 6.3.4.4 GO:0000166 ... P0A7D4 10556888 MOAD: ic50=0.665uM
    PDBbind: -logKd/Ki=6.18, IC50=0.665uM
    3768 1qf5:A (2.0) BS04 RPL 6.3.4.4 GO:0000166 ... P0A7D4 10556888 MOAD: ic50=0.043uM
    PDBbind: -logKd/Ki=7.37, IC50=0.043uM
    3769 1qfq:B (-1.00) BS01 rna ? N/A P03045 10759866 PDBbind: Kd=20nM
    3770 1qfs:A (2.0) BS01 ZPR 3.4.21.26 GO:0004252 ... P23687 9695945 PDBbind: -logKd/Ki=9.48, IC50=0.33nM
    BindingDB: IC50=0.33nM
    3771 1qft:A (1.25) BS01 HSM ? GO:0005576 ... O77421 10360182 MOAD: Kd=1.7nM
    PDBbind: -logKd/Ki=8.77, Kd=1.7nM
    3772 1qft:A (1.25) BS02 HSM ? GO:0005576 ... O77421 10360182 MOAD: Kd=1.7nM
    PDBbind: -logKd/Ki=8.77, Kd=1.7nM
    3773 1qft:B (1.25) BS01 HSM ? GO:0005576 ... O77421 10360182 MOAD: Kd=1.7nM
    3774 1qft:B (1.25) BS02 HSM ? GO:0005576 ... O77421 10360182 MOAD: Kd=1.7nM
    3775 1qft:B (1.25) BS03 HSM ? GO:0005576 ... O77421 10360182 MOAD: Kd=1.7nM
    3776 1qfy:A (1.8) BS02 NAP 1.18.1.2 GO:0016491 ... P10933 10467097 MOAD: Kd<0.2uM
    3777 1qfy:B (1.8) BS02 NAP 1.18.1.2 GO:0016491 ... P10933 10467097 MOAD: Kd<0.2uM
    3778 1qg6:A (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10493822 MOAD: Kd=22pM
    BindingDB: IC50=430nM
    3779 1qg6:B (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10493822 MOAD: Kd=22pM
    BindingDB: IC50=430nM
    3780 1qg6:C (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10493822 MOAD: Kd=22pM
    BindingDB: IC50=430nM
    3781 1qg6:D (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10493822 MOAD: Kd=22pM
    BindingDB: IC50=430nM
    3782 1qga:A (2.0) BS02 NAP 1.18.1.2 GO:0016491 ... P10933 10467097 MOAD: Kd=5.5uM
    3783 1qga:B (2.0) BS02 NAP 1.18.1.2 GO:0016491 ... P10933 10467097 MOAD: Kd=5.5uM
    3784 1qhc:A (1.7) BS01 PUA 4.6.1.18 GO:0003676 ... P61823 10441122 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    3785 1qhc:B (1.7) BS01 PUA 4.6.1.18 GO:0003676 ... P61823 10441122 MOAD: Ki=27nM
    3786 1qhr:B (2.2) BS02 157 3.4.21.5 GO:0004252 ... P00734 10387040 PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=130nM
    3787 1qin:A (2.0) BS02 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    3788 1qin:A (2.0) BS03 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    3789 1qin:B (2.0) BS01 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    3790 1qin:B (2.0) BS03 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    3791 1qiw:A (2.3) BS05 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    3792 1qiw:A (2.3) BS06 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    3793 1qiw:B (2.3) BS05 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    3794 1qj7:B (2.2) BS02 GR1 3.4.21.5 GO:0004252 ... P00734 10387040 PDBbind: -logKd/Ki=8.10, IC50=8nM
    3795 1qji:A (2.14) BS02 PKF 3.4.24.21 GO:0004222 ... P07584 8756323 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    3796 1qk3:A (1.65) BS01 5GP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=7.1uM
    PDBbind: -logKd/Ki=5.15, Kd=7.1uM
    3797 1qk3:B (1.65) BS01 5GP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=7.1uM
    PDBbind: -logKd/Ki=5.15, Kd=7.1uM
    3798 1qk3:C (1.65) BS01 5GP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=7.1uM
    3799 1qk3:D (1.65) BS01 5GP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=7.1uM
    3800 1qk4:A (1.9) BS01 IMP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=61uM
    PDBbind: -logKd/Ki=4.21, Kd=61uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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