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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3201 1of1:A (1.95) BS01 SCT 2.7.1.21 GO:0004797 ... P0DTH5 15163659 MOAD: ic50=15uM
    3202 1of1:B (1.95) BS01 SCT 2.7.1.21 GO:0004797 ... P0DTH5 15163659 MOAD: ic50=15uM
    3203 1ofz:A (1.5) BS01 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3204 1ofz:A (1.5) BS02 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3205 1ofz:A (1.5) BS03 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3206 1ofz:A (1.5) BS05 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3207 1ofz:B (1.5) BS01 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3208 1ofz:B (1.5) BS03 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3209 1ofz:B (1.5) BS05 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3210 1ofz:B (1.5) BS06 FUL ? GO:0030246 ... P18891 12732625 MOAD: Kd=24.1uM
    3211 1ogd:A (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    3212 1ogd:B (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    3213 1ogd:C (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    3214 1ogd:D (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    3215 1ogd:E (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    3216 1ogg:A (1.97) BS01 AMI 3.2.1.14 GO:0004553 ... P11797 14726210 PDBbind: -logKd/Ki=5.19, Ki=6.4uM
    3217 1ogu:A (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 PDBbind: -logKd/Ki=7.47, IC50=0.034uM
    BindingDB: Ki=2400nM, IC50=34nM
    3218 1ogu:C (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 BindingDB: Ki=2400nM, IC50=34nM
    3219 1ogx:A (2.0) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=0.81uM
    3220 1ogx:B (2.0) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=0.81uM
    3221 1ogz:A (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 12852789 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    3222 1ohj:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    3223 1ohk:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    3224 1ohr:A (2.1) BS01 1UN ? GO:0004190 ... Q9Q288 9397180 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    3225 1ohr:B (2.1) BS01 1UN ? GO:0004190 ... Q9Q288 9397180 PDBbind: -logKd/Ki=8.70, Ki=2nM
    3226 1oi9:A (2.1) BS01 N20 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=69nM
    PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=69nM
    3227 1oi9:C (2.1) BS01 N20 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=69nM
    BindingDB: IC50=69nM
    3228 1oif:A (2.12) BS01 IFM 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=51450000M^-1
    PDBbind: -logKd/Ki=7.72, Kd=19nM
    3229 1oif:B (2.12) BS01 IFM 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=51450000M^-1
    3230 1oim:A (2.15) BS01 NOJ 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=210000M^-1
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    3231 1oim:B (2.15) BS01 NOJ 3.2.1.21 GO:0004553 ... Q08638 14624580 MOAD: Ka=210000M^-1
    3232 1oip:A (1.95) BS01 VIV ? GO:0001890 ... P49638 12899840 BindingDB: Kd=2.4nM
    3233 1oiq:A (2.31) BS01 HDU 2.7.11.22 GO:0000082 ... P24941 12941325 MOAD: ic50=2.9uM
    PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    BindingDB: IC50=2884nM
    3234 1oir:A (1.91) BS01 HDY 2.7.11.22 GO:0000082 ... P24941 12941325 MOAD: ic50=0.032uM
    PDBbind: -logKd/Ki=7.49, IC50=0.032uM
    BindingDB: IC50=32nM
    3235 1oit:A (1.6) BS01 HDT 2.7.11.22 GO:0000082 ... P24941 12941325 MOAD: ic50<0.003uM
    PDBbind: -logKd/Ki=8.52, IC50<0.003uM
    BindingDB: IC50=1nM
    3236 1oiu:A (2.0) BS01 N76 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    3237 1oiu:C (2.0) BS01 N76 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    3238 1oiy:A (2.4) BS01 N41 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=64nM
    PDBbind: -logKd/Ki=7.19, IC50=64nM
    BindingDB: IC50=64nM
    3239 1oiy:C (2.4) BS01 N41 2.7.11.22 GO:0000082 ... P24941 15239650 MOAD: ic50=64nM
    BindingDB: IC50=64nM
    3240 1oj9:A (2.3) BS02 1PB 1.4.3.21
    1.4.3.4    		 GO:0005515 ... P27338 12913124 MOAD: Ki=35uM
    3241 1oj9:B (2.3) BS02 1PB 1.4.3.21
    1.4.3.4    		 GO:0005515 ... P27338 12913124 MOAD: Ki=35uM
    3242 1oja:A (1.7) BS02 ISN 1.4.3.21
    1.4.3.4    		 GO:0005515 ... P27338 12913124 MOAD: Ki=3uM
    BindingDB: IC50=18750nM, Ki=3000nM
    3243 1oja:B (1.7) BS02 ISN 1.4.3.21
    1.4.3.4    		 GO:0005515 ... P27338 12913124 MOAD: Ki=3uM
    BindingDB: IC50=18750nM, Ki=3000nM
    3244 1okl:A (2.1) BS02 MNS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8557623 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    3245 1okn:A (2.4) BS02 STB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=2.3nM
    3246 1oko:A (1.6) BS02 GAL ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3247 1oko:B (1.6) BS02 GLA ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3248 1oko:B (1.6) BS03 GAL ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3249 1oko:C (1.6) BS02 GLA ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3250 1oko:C (1.6) BS03 GAL ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3251 1oko:D (1.6) BS02 GLA ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3252 1oko:D (1.6) BS03 GAL ? GO:0005737 ... Q05097 14644431 MOAD: Ka=34000M^-1
    3253 1oky:A (2.3) BS01 STU 2.7.11.1 GO:0004672 ... O15530 12892559 MOAD: ic50=6.5nM
    PDBbind: -logKd/Ki=8.19, IC50=6.5nM
    3254 1okz:A (2.51) BS01 UCN 2.7.11.1 GO:0004672 ... O15530 12892559 PDBbind: -logKd/Ki=8.30, IC50=5nM
    3255 1om1:A (1.68) BS01 IQA 2.7.11.1 GO:0004672 ... P28523 12816539 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    3256 1om5:A (2.3) BS04 INE 1.14.13.39 GO:0004517 ... P29476 N/A BindingDB: IC50=1800nM
    3257 1om5:B (2.3) BS05 INE 1.14.13.39 GO:0004517 ... P29476 N/A BindingDB: IC50=1800nM
    3258 1omh:A (1.95) BS01 dna ? N/A Q47673 14625590 PDBbind: Kd=70nM
    3259 1ong:A (1.1) BS03 WY4 3.5.2.6 GO:0008800 ... P0AD64 14609325 PDBbind: -logKd/Ki=8.05, IC50=9nM
    3260 1onh:A (1.38) BS01 WY4 3.5.2.6 GO:0008800 ... Q59401 14609325 PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    3261 1onp:A (2.5) BS02 FOM 1.1.1.267 GO:0008299 ... P45568 12621040 PDBbind: -logKd/Ki=7.52, IC50=0.030uM
    BindingDB: IC50=30nM
    3262 1onp:B (2.5) BS02 FOM 1.1.1.267 GO:0008299 ... P45568 12621040 BindingDB: IC50=30nM
    3263 1ony:A (2.15) BS01 588 3.1.3.48 GO:0004725 ... P18031 12747781 PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    BindingDB: Ki=170nM
    3264 1onz:A (2.4) BS01 968 3.1.3.48 GO:0004725 ... P18031 12747781 PDBbind: -logKd/Ki=5.10, Kd=8uM
    BindingDB: Ki=25119nM
    3265 1opb:A (1.9) BS01 RET ? GO:0005504 ... P06768 8487303 MOAD: Kd=50nM
    3266 1opb:B (1.9) BS01 RET ? GO:0005504 ... P06768 8487303 MOAD: Kd=50nM
    3267 1opb:C (1.9) BS01 RET ? GO:0005504 ... P06768 8487303 MOAD: Kd=50nM
    3268 1opb:D (1.9) BS01 RET ? GO:0005504 ... P06768 8487303 MOAD: Kd=50nM
    3269 1opj:A (1.75) BS01 STI 2.7.10.2 GO:0004672 ... P00520 12654251 BindingDB: IC50=10.8nM
    3270 1opj:B (1.75) BS01 STI 2.7.10.2 GO:0004672 ... P00520 12654251 BindingDB: IC50=10.8nM
    3271 1opl:A (3.42) BS01 P16 2.7.10.2 GO:0004672 ... P00519 12654251 BindingDB: IC50=2.8nM
    3272 1opl:B (3.42) BS01 P16 2.7.10.2 GO:0004672 ... P00519 12654251 BindingDB: IC50=2.8nM
    3273 1oq5:A (1.5) BS02 CEL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 14736236 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: Ki=21nM, IC50=21nM
    3274 1ork:A (2.4) BS01 ATC ? GO:0000976 ... P0ACT4 9878420 MOAD: Kd=1.56nM
    PDBbind: -logKd/Ki=8.81, Kd=1.56nM
    3275 1orw:A (2.84) BS01 PHI 3.4.14.5 GO:0002020 ... P22411 12690074 PDBbind: -logKd/Ki=7.60, Ki=25.1nM
    3276 1orw:A (2.84) BS02 P2Y 3.4.14.5 GO:0002020 ... P22411 12690074 PDBbind: -logKd/Ki=7.60, Ki=25.1nM
    3277 1os0:A (2.1) BS06 0PQ 3.4.24.27 GO:0004222 ... P00800 12832763 MOAD: Ki=0.93uM
    PDBbind: -logKd/Ki=6.03, Ki=0.93uM
    3278 1os5:A (2.2) BS01 NH1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12805457 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    3279 1osb:A (2.65) BS01 dna ? N/A Q47673 14625590 PDBbind: Kd=70nM
    3280 1osb:C (2.65) BS01 dna ? N/A Q47673 14625590 PDBbind: Kd=70nM
    3281 1osf:A (1.75) BS01 KOS 3.6.4.10 GO:0005524 ... P07900 12725864 BindingDB: IC50=919nM
    3282 1oss:A (1.93) BS02 BEN 3.4.21.4 GO:0004252 ... P00775 12885239 MOAD: Ki=16.4uM
    PDBbind: -logKd/Ki=4.79, Ki=16.4uM
    3283 1oth:A (1.85) BS01 PAO 2.1.3.3 GO:0000050 ... P00480 9852088 PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    BindingDB: Ki=100nM
    3284 1ouk:A (2.5) BS01 084 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=0.13nM
    PDBbind: -logKd/Ki=9.89, IC50=0.13nM
    BindingDB: IC50=110nM
    3285 1ouy:A (2.5) BS01 094 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=4.3nM
    PDBbind: -logKd/Ki=8.37, IC50=4.3nM
    3286 1ouz:A (2.41) BS01 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=15nM
    3287 1ouz:A (2.41) BS02 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=15nM
    3288 1ouz:A (2.41) BS03 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=15nM
    3289 1ouz:B (2.41) BS01 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=15nM
    3290 1ouz:B (2.41) BS02 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=15nM
    3291 1ove:A (2.1) BS01 358 2.7.11.24 GO:0000077 ... Q16539 12897767 MOAD: ic50=0.74nM
    PDBbind: -logKd/Ki=9.13, IC50=0.74nM
    BindingDB: IC50=0.740000nM
    3292 1ow4:A (1.6) BS01 2AN ? GO:0005549 ... Q8MTC1 12766173 MOAD: Kd=2.1uM
    3293 1ow4:B (1.6) BS01 2AN ? GO:0005549 ... Q8MTC1 12766173 MOAD: Kd=2.1uM
    3294 1owb:A (2.2) BS01 NAD 2.3.3.16 GO:0004108 ... P0ABH7 12824188 MOAD: Kd=1.16uM
    3295 1owb:B (2.2) BS01 NAD 2.3.3.16 GO:0004108 ... P0ABH7 12824188 MOAD: Kd=1.16uM
    3296 1owd:A (2.32) BS01 497 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=6.3nM
    PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: Ki=6.3nM
    3297 1owe:A (1.6) BS01 675 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=0.631uM
    PDBbind: -logKd/Ki=6.20, Ki=631nM
    BindingDB: Ki=631nM, IC50=13000nM
    3298 1owf:A (1.95) BS01 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=4.6nM
    3299 1owf:A (1.95) BS02 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=4.6nM
    3300 1owf:A (1.95) BS03 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=4.6nM
    3301 1owf:B (1.95) BS01 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=4.6nM
    3302 1owf:B (1.95) BS02 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=4.6nM
    3303 1owg:A (2.1) BS01 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=200nM
    3304 1owg:A (2.1) BS02 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=200nM
    3305 1owg:A (2.1) BS03 dna ? GO:0000976 ... P0A6X7 12842466 PDBbind: Kd=200nM
    3306 1owg:B (2.1) BS01 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=200nM
    3307 1owg:B (2.1) BS02 dna ? GO:0003677 ... P0A6Y1 12842466 PDBbind: Kd=200nM
    3308 1owh:A (1.61) BS01 239 3.4.21.73 GO:0004252 ... P00749 14711304 MOAD: Ki=40nM
    PDBbind: -logKd/Ki=7.40, Ki=40nM
    BindingDB: Ki=40nM, IC50=1200nM
    3309 1owi:A (2.93) BS01 426 3.4.21.73 GO:0004252 ... P00749 14711304 PDBbind: -logKd/Ki=7.55, Ki=28.0nM
    BindingDB: Ki=25nM
    3310 1owj:A (3.1) BS01 155 3.4.21.73 GO:0004252 ... P00749 14711304 PDBbind: -logKd/Ki=7.32, Ki=48.0nM
    BindingDB: Ki=48nM
    3311 1owk:A (2.8) BS01 303 3.4.21.73 GO:0004252 ... P00749 14711304 PDBbind: -logKd/Ki=7.63, Ki=23.5nM
    BindingDB: Ki=23.5nM
    3312 1owr:M (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3313 1owr:M (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3314 1owr:N (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3315 1owr:N (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3316 1owr:P (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3317 1owr:P (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3318 1owr:Q (3.0) BS01 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3319 1owr:Q (3.0) BS02 dna ? GO:0003677 ... Q13469 14643663 PDBbind: Kd=2.7nM
    3320 1oxr:A (1.93) BS01 AIN 3.1.1.4 GO:0004623 ... P60045 15823962 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    3321 1oyn:A (2.0) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.55uM
    PDBbind: -logKd/Ki=6.26, IC50=0.55uM
    3322 1oyn:B (2.0) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.55uM
    3323 1oyn:C (2.0) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.55uM
    3324 1oyn:D (2.0) BS02 ROL 3.1.4.53 GO:0004114 ... Q08499 12842049 MOAD: ic50=0.55uM
    3325 1oyq:A (1.9) BS02 T87 3.4.21.4 GO:0004175 ... P00760 11342132 MOAD: Ki=110nM
    PDBbind: -logKd/Ki=6.96, Ki=110nM
    BindingDB: Ki=110nM
    3326 1oyt:H (1.67) BS04 FSN 3.4.21.5 GO:0004252 ... P00734 12800172 MOAD: Ki=0.057uM
    PDBbind: -logKd/Ki=7.24, Ki=0.057uM
    3327 1oz0:A (2.5) BS02 MS1 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12974624 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    3328 1oz0:A (2.5) BS03 MS1 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12974624 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    3329 1oz0:B (2.5) BS01 MS1 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12974624 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    3330 1oz0:B (2.5) BS03 MS1 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12974624 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    3331 1oz1:A (2.1) BS01 FPH 2.7.11.24 GO:0000077 ... Q16539 14561090 MOAD: ic50=6.5nM
    3332 1ozv:A (2.65) BS01 LYS 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 12819771 PDBbind: -logKd/Ki=1.44, Ki=36.6mM
    3333 1p01:A (2.0) BS01 0EG 3.4.21.12 GO:0004252 ... P00778 3122831 PDBbind: -logKd/Ki=9.46, Ki=0.35nM
    3334 1p17:A (2.7) BS01 IMP 2.4.2.8 GO:0000166 ... Q4DRC4 14698288 PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    3335 1p19:A (2.3) BS01 IMP 2.4.2.8 GO:0000166 ... Q4DRC4 14698288 MOAD: Kd=76.8uM
    PDBbind: -logKd/Ki=4.11, Kd=76.8uM
    3336 1p19:B (2.3) BS01 IMP 2.4.2.8 GO:0000166 ... Q4DRC4 14698288 MOAD: Kd=76.8uM
    3337 1p19:C (2.3) BS01 IMP 2.4.2.8 GO:0000166 ... Q4DRC4 14698288 MOAD: Kd=76.8uM
    3338 1p19:D (2.3) BS01 IMP 2.4.2.8 GO:0000166 ... Q4DRC4 14698288 MOAD: Kd=76.8uM
    3339 1p1n:A (1.6) BS01 KAI ? GO:0015276 ... P19491 12730367 MOAD: Kd=0.16uM
    PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    BindingDB: EC50=380000nM, Ki=3690nM
    3340 1p1o:A (1.6) BS01 QUS ? GO:0015276 ... P19491 12730367 MOAD: Kd=1.74uM
    PDBbind: -logKd/Ki=5.76, Kd=1.74uM
    3341 1p1q:A (2.0) BS02 AMQ ? GO:0015276 ... P19491 12730367 MOAD: Kd=12.8uM
    BindingDB: Ki=17nM
    3342 1p1q:B (2.0) BS03 AMQ ? GO:0015276 ... P19491 12730367 MOAD: Kd=12.8uM
    BindingDB: Ki=17nM
    3343 1p1q:C (2.0) BS02 AMQ ? GO:0015276 ... P19491 12730367 MOAD: Kd=12.8uM
    BindingDB: Ki=17nM
    3344 1p1r:A (1.57) BS04 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3345 1p1r:A (1.57) BS05 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3346 1p1r:B (1.57) BS01 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3347 1p1r:B (1.57) BS05 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3348 1p1r:C (1.57) BS04 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3349 1p1r:C (1.57) BS05 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3350 1p1r:D (1.57) BS04 NMH 1.1.1.1 GO:0004022 ... P00327 12855684 MOAD: Ki=15uM
    3351 1p1u:A (2.0) BS01 AMQ ? GO:0015276 ... P19491 12730367 BindingDB: Ki=17nM
    3352 1p1u:B (2.0) BS01 AMQ ? GO:0015276 ... P19491 12730367 BindingDB: Ki=17nM
    3353 1p1w:A (1.8) BS01 AMQ ? GO:0015276 ... P19491 12730367 BindingDB: Ki=17nM
    3354 1p1w:B (1.8) BS01 AMQ ? GO:0015276 ... P19491 12730367 BindingDB: Ki=17nM
    3355 1p28:A (1.7) BS01 HBR ? GO:0005549 ... Q8MTC1 12766173 MOAD: Kd=3.8uM
    3356 1p2a:A (2.5) BS01 5BN 2.7.11.22 GO:0000082 ... P24941 12852944 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    3357 1p44:A (2.7) BS02 GEQ 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: IC50=200nM
    3358 1p44:B (2.7) BS02 GEQ 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: IC50=200nM
    3359 1p44:C (2.7) BS02 GEQ 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: IC50=200nM
    3360 1p44:D (2.7) BS02 GEQ 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: IC50=200nM
    3361 1p45:A (2.6) BS02 TCL 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: Ki=220nM, IC50=1000nM
    3362 1p45:A (2.6) BS03 TCL 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: Ki=220nM, IC50=1000nM
    3363 1p45:B (2.6) BS02 TCL 1.3.1.9 GO:0004318 ... P9WGR1 12606558 BindingDB: Ki=220nM, IC50=1000nM
    3364 1p47:A (2.2) BS01 dna ? N/A P08046 12818197 PDBbind: Kd=2.1fM
    3365 1p47:A (2.2) BS02 dna ? N/A P08046 12818197 PDBbind: Kd=2.1fM
    3366 1p47:B (2.2) BS01 dna ? N/A P08046 12818197 PDBbind: Kd=2.1fM
    3367 1p47:B (2.2) BS02 dna ? N/A P08046 12818197 PDBbind: Kd=2.1fM
    3368 1p4g:A (2.1) BS01 CGF 2.4.1.1 GO:0000166 ... P00489 N/A MOAD: Ki=1.8mM
    3369 1p4h:A (2.06) BS01 CR6 2.4.1.1 GO:0000166 ... P00489 N/A MOAD: Ki=0.31mM
    BindingDB: Ki=310000nM
    3370 1p4j:A (2.0) BS02 CBF 2.4.1.1 GO:0000166 ... P00489 N/A MOAD: Ki=0.88mM
    3371 1p4r:A (2.55) BS02 354 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.10, Ki=8nM
    3372 1p4r:A (2.55) BS05 354 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.10, Ki=8nM
    3373 1p4r:B (2.55) BS02 354 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.10, Ki=8nM
    3374 1p4r:B (2.55) BS04 354 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.10, Ki=8nM
    3375 1p51:A (2.5) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3376 1p51:A (2.5) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3377 1p51:B (2.5) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3378 1p51:B (2.5) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3379 1p51:B (2.5) BS03 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3380 1p51:C (2.5) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3381 1p51:C (2.5) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3382 1p51:D (2.5) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3383 1p51:D (2.5) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3384 1p51:D (2.5) BS03 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3385 1p57:B (1.75) BS01 CR4 3.4.21.106 GO:0004252 ... P05981 12962630 MOAD: Ki=40uM
    PDBbind: -logKd/Ki=4.40, Ki=40uM
    3386 1p5e:A (2.22) BS01 TBS 2.7.11.22 GO:0000082 ... P24941 12869192 PDBbind: -logKd/Ki=4.81, IC50=15.6uM
    3387 1p6d:A (2.0) BS04 3PC 3.1.4.3 GO:0004629 ... P09598 12921783 MOAD: Ki=1.15mM
    PDBbind: -logKd/Ki=2.94, Ki=1.15mM
    3388 1p6e:A (2.3) BS04 PC5 3.1.4.3 GO:0004629 ... P09598 12921783 MOAD: Ki=1.21mM
    PDBbind: -logKd/Ki=2.92, Ki=1.21mM
    3389 1p6h:A (1.98) BS04 DP1 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.3uM
    BindingDB: Ki=130nM
    3390 1p6h:B (1.98) BS05 DP1 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.3uM
    BindingDB: Ki=130nM
    3391 1p6i:A (1.9) BS04 DP3 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.15uM
    3392 1p6i:B (1.9) BS05 DP3 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.15uM
    3393 1p6j:A (2.0) BS04 DP9 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM, IC50=640nM
    3394 1p6j:B (2.0) BS05 DP9 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM, IC50=640nM
    3395 1p6k:A (1.78) BS05 DP1 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=67uM
    BindingDB: Ki=130nM
    3396 1p6k:B (1.78) BS06 DP1 1.14.13.39 GO:0004517 ... P29476 14718923 MOAD: Ki=67uM
    BindingDB: Ki=130nM
    3397 1p6l:A (2.35) BS03 DP1 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=107uM
    3398 1p6l:B (2.35) BS05 DP1 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=107uM
    3399 1p6m:A (2.27) BS03 DP3 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=80uM
    3400 1p6m:B (2.27) BS05 DP3 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=80uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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