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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2801 1n34:S (3.8) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=220uM
    2802 1n34:T (3.8) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=220uM
    2803 1n36:B (3.65) BS01 rna ? GO:0003735 ... P80371 12464183 PDBbind: Kd=150uM
    2804 1n36:C (3.65) BS01 rna ? GO:0003676 ... P80372 12464183 PDBbind: Kd=150uM
    2805 1n36:D (3.65) BS01 rna ? GO:0003723 ... P80373 12464183 PDBbind: Kd=150uM
    2806 1n36:E (3.65) BS01 rna ? GO:0003723 ... Q5SHQ5 12464183 PDBbind: Kd=150uM
    2807 1n36:F (3.65) BS01 rna ? GO:0003735 ... Q5SLP8 12464183 PDBbind: Kd=150uM
    2808 1n36:G (3.65) BS01 rna ? GO:0000028 ... P17291 12464183 PDBbind: Kd=150uM
    2809 1n36:H (3.65) BS01 rna ? GO:0003735 ... P0DOY9 12464183 PDBbind: Kd=150uM
    2810 1n36:I (3.65) BS01 rna ? GO:0000049 ... P80374 12464183 PDBbind: Kd=150uM
    2811 1n36:J (3.65) BS01 rna ? GO:0000049 ... Q5SHN7 12464183 PDBbind: Kd=150uM
    2812 1n36:K (3.65) BS01 rna ? GO:0003735 ... P80376 12464183 PDBbind: Kd=150uM
    2813 1n36:L (3.65) BS01 rna ? GO:0000049 ... Q5SHN3 12464183 PDBbind: Kd=150uM
    2814 1n36:M (3.65) BS01 rna ? GO:0000049 ... P80377 12464183 PDBbind: Kd=150uM
    2815 1n36:N (3.65) BS01 rna ? GO:0003735 ... P0DOY6 12464183 PDBbind: Kd=150uM
    2816 1n36:O (3.65) BS01 rna ? GO:0003735 ... Q5SJ76 12464183 PDBbind: Kd=150uM
    2817 1n36:P (3.65) BS01 rna ? GO:0003735 ... Q5SJH3 12464183 PDBbind: Kd=150uM
    2818 1n36:Q (3.65) BS01 rna ? GO:0003735 ... P0DOY7 12464183 PDBbind: Kd=150uM
    2819 1n36:R (3.65) BS01 rna ? GO:0003735 ... Q5SLQ0 12464183 PDBbind: Kd=150uM
    2820 1n36:S (3.65) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=150uM
    2821 1n36:T (3.65) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=150uM
    2822 1n3c:A (2.7) BS01 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 12578369 PDBbind: Kd=700nM
    2823 1n3c:A (2.7) BS02 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 12578369 PDBbind: Kd=700nM
    2824 1n3i:A (1.9) BS02 DIH 6.3.2.1 GO:0003824 ... P9WIL5 12755607 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    2825 1n3i:B (1.9) BS02 DIH 6.3.2.1 GO:0003824 ... P9WIL5 12755607 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    2826 1n3i:C (1.9) BS02 DIH 6.3.2.1 GO:0003824 ... P9WIL5 12755607 MOAD: Kd=1.3nM
    2827 1n3z:A (1.65) BS01 U3P 4.6.1.18 GO:0003676 ... P00669 12833549 PDBbind: -logKd/Ki=4.20, Ki=63.2uM
    BindingDB: Ki=63200nM
    2828 1n43:A (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.55, Kd~28pM
    BindingDB: Kd=1.000000nM
    2829 1n43:B (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2830 1n43:C (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2831 1n43:D (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.55, Kd~28pM
    BindingDB: Kd=1.000000nM
    2832 1n46:A (2.2) BS01 PFA ? GO:0003677 ... P10828 12565933 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    2833 1n46:B (2.2) BS01 PFA ? GO:0003677 ... P10828 12565933 MOAD: Ki=0.03nM
    2834 1n4h:A (2.1) BS02 REA ? GO:0003677 ... P45446 12958591 MOAD: Kd=280nM
    PDBbind: -logKd/Ki=6.55, Ki=0.28uM
    2835 1n4k:A (2.2) BS01 I3P ? GO:0005220 ... P11881 12442173 MOAD: Kd=0.09nM
    PDBbind: -logKd/Ki=10.05, Kd=0.09nM
    2836 1n5r:A (2.25) BS01 PRM 3.1.1.7 GO:0001919 ... P21836 12505979 MOAD: Ki=2.2uM
    PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    2837 1n5x:A (2.8) BS04 TEI 1.17.1.4
    1.17.3.2    		 GO:0002197 ... P80457 12421831 BindingDB: IC50=10.0nM, Ki=120nM
    2838 1n5x:B (2.8) BS04 TEI 1.17.1.4
    1.17.3.2    		 GO:0002197 ... P80457 12421831 BindingDB: IC50=10.0nM, Ki=120nM
    2839 1n6b:A (2.3) BS02 DMZ 1.14.14.1 GO:0004497 ... P00179 12767218 MOAD: Kd=20uM
    2840 1n77:A (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Kd=90uM
    2841 1n77:B (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Kd=90uM
    2842 1n78:A (2.1) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Ki=3uM
    2843 1n78:B (2.1) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Ki=3uM
    2844 1n7i:A (2.8) BS02 LY1 2.1.1.28 GO:0004603 ... P11086 14695818 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    BindingDB: Ki=4400nM
    2845 1n7i:B (2.8) BS02 LY1 2.1.1.28 GO:0004603 ... P11086 14695818 BindingDB: Ki=4400nM
    2846 1n7j:A (2.7) BS02 IDI 2.1.1.28 GO:0004603 ... P11086 14695818 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    BindingDB: Ki=93nM
    2847 1n7j:B (2.7) BS02 IDI 2.1.1.28 GO:0004603 ... P11086 14695818 BindingDB: Ki=93nM
    2848 1n8u:A (1.8) BS01 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2849 1n8u:A (1.8) BS02 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2850 1n8u:A (1.8) BS03 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2851 1n8v:A (1.39) BS01 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2852 1n8v:A (1.39) BS02 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2853 1n8v:A (1.39) BS03 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    2854 1n8v:B (1.39) BS01 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    2855 1n8v:B (1.39) BS02 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    2856 1n8v:B (1.39) BS03 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    2857 1n94:A (3.5) BS02 TIN 2.5.1.58
    2.5.1.59    		 GO:0008318 ... Q04631 12657282 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    2858 1n94:B (3.5) BS02 TIN 2.5.1.58 GO:0003824 ... Q02293 12657282 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    2859 1n95:B (2.3) BS03 FTH 2.5.1.58 GO:0003824 ... Q02293 12657282 PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    2860 1n9a:B (3.2) BS03 FTI 2.5.1.58 GO:0003824 ... Q02293 12657283 PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    2861 1n9m:A (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.96, Kd~11pM
    BindingDB: Kd=1.000000nM
    2862 1n9m:B (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2863 1n9m:C (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2864 1n9m:D (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.96, Kd~11pM
    BindingDB: Kd=1.000000nM
    2865 1naa:A (1.8) BS02 ABL 1.1.99.18 GO:0016614 ... Q01738 12493734 MOAD: Ki=0.25mM
    2866 1naa:B (1.8) BS02 ABL 1.1.99.18 GO:0016614 ... Q01738 12493734 MOAD: Ki=0.25mM
    2867 1nav:A (2.5) BS01 IH5 ? GO:0003677 ... P10827 12699376 BindingDB: IC50=25nM, Ki=7.18nM, EC50=11nM
    2868 1nax:A (2.7) BS01 IH5 ? GO:0003677 ... P10828 12699376 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    BindingDB: IC50=1.1nM, Ki=0.37nM, EC50=1.12nM
    2869 1nc1:A (2.0) BS01 MTH 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=0.75uM
    PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    2870 1nc1:B (2.0) BS01 MTH 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=0.75uM
    PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    2871 1nc3:A (2.2) BS01 FMC 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    2872 1nc3:B (2.2) BS01 FMC 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    2873 1nc6:A (1.9) BS03 ABB 3.4.21.4 GO:0004175 ... P00760 12930148 PDBbind: -logKd/Ki=8.00, Ki=10nM
    2874 1nd5:A (2.9) BS01 2BF 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 12525165 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4nM
    2875 1nd5:B (2.9) BS01 2BF 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 12525165 BindingDB: IC50=4nM
    2876 1nd5:C (2.9) BS01 2BF 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 12525165 BindingDB: IC50=4nM
    2877 1nd5:D (2.9) BS01 2BF 3.1.3.2
    3.1.3.48
    3.1.3.5    		 GO:0003993 ... P15309 12525165 BindingDB: IC50=4nM
    2878 1nde:A (3.0) BS01 MON ? GO:0003677 ... Q92731 12459017 PDBbind: -logKd/Ki=7.82, Ki=15nM
    2879 1ndj:A (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=12.16, Kd~0.69pM
    BindingDB: Kd=1.000000nM
    2880 1ndj:B (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2881 1ndj:C (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 BindingDB: Kd=1.000000nM
    2882 1ndj:D (1.81) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=12.16, Kd~0.69pM
    BindingDB: Kd=1.000000nM
    2883 1ndv:A (2.3) BS02 FR0 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1200nM
    2884 1ndw:A (2.0) BS02 FR2 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=5.9uM
    PDBbind: -logKd/Ki=5.23, Ki=5900nM
    2885 1ndy:A (2.0) BS02 FR3 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=0.68uM
    PDBbind: -logKd/Ki=6.17, Ki=680nM
    2886 1ndz:A (2.0) BS02 FR5 3.5.4.4 GO:0004000 ... P56658 14709046 MOAD: Ki=7.7nM
    PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    2887 1nf3:A (2.1) BS02 GNP 3.6.5.2 GO:0000139 ... P60953 12606577 MOAD: Kd=50nM
    2888 1nf3:B (2.1) BS02 GNP 3.6.5.2 GO:0000139 ... P60953 12606577 MOAD: Kd=50nM
    2889 1nf7:A (2.65) BS02 MYD 1.1.1.205 GO:0000166 ... P12268 N/A BindingDB: Ki=250nM
    2890 1nf7:B (2.65) BS02 MYD 1.1.1.205 GO:0000166 ... P12268 N/A BindingDB: Ki=250nM
    2891 1nf8:A (1.6) BS01 ISC 3.3.2.15 GO:0002047 ... P0DPB9 12741825 MOAD: Kd=0.015uM
    PDBbind: -logKd/Ki=7.82, Kd=0.015uM
    2892 1nfs:A (1.96) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 12540835 MOAD: Kd<0.12nM
    PDBbind: -logKd/Ki=9.92, Kd<0.12nM
    2893 1nfs:B (1.96) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 12540835 MOAD: Kd<0.12nM
    2894 1nfu:A (2.05) BS02 RRP 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: Ki=4nM
    2895 1nfw:A (2.1) BS02 RRR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    BindingDB: Ki=1.1nM
    2896 1nfx:A (2.15) BS02 RDR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    BindingDB: Ki=3.0nM
    2897 1nfy:A (2.1) BS02 RTR 3.4.21.6 GO:0004252 ... P00742 12593649 MOAD: Ki=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: Ki=1.3nM
    2898 1ng9:A (2.6) BS01 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    2899 1ng9:A (2.6) BS02 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    2900 1ng9:B (2.6) BS01 dna ? GO:0000018 ... P23909 12554674 PDBbind: Kd=9.6uM
    2901 1nhb:A (1.8) BS01 PYJ 3.2.1.17 GO:0003796 ... P00720 7612599 MOAD: Ka=14800M^-1
    2902 1nhg:A (2.43) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: IC50=49nM
    2903 1nhg:B (2.43) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.05uM
    BindingDB: IC50=49nM
    2904 1nhu:A (2.0) BS01 153 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12509436 MOAD: Ki=2.2uM
    PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    2905 1nhu:B (2.0) BS01 153 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12509436 MOAD: Ki=2.2uM
    2906 1nhv:A (2.9) BS01 154 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 12509436 PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    2907 1nhw:A (2.35) BS02 TCC 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=14.3uM
    PDBbind: -logKd/Ki=4.84, Ki=14.3uM
    2908 1nhw:B (2.35) BS02 TCC 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=14.3uM
    2909 1nhx:A (2.1) BS03 FTB 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 14552798 MOAD: ic50=2.11uM
    PDBbind: -logKd/Ki=5.68, IC50=2.11uM
    BindingDB: IC50=2110nM
    2910 1nhz:A (2.3) BS01 486 ? N/A P04150 12686538 PDBbind: -logKd/Ki=6.08, Ki=0.84uM
    BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    2911 1ni1:B (2.3) BS03 2C5 2.5.1.58 GO:0003824 ... Q02293 12699757 MOAD: ic50=0.9nM
    PDBbind: -logKd/Ki=9.05, IC50=0.90nM
    2912 1niu:A (2.2) BS01 DCS 5.1.1.1 GO:0003824 ... P10724 12741835 MOAD: Ki=0.08uM
    2913 1niu:A (2.2) BS02 DCS 5.1.1.1 GO:0003824 ... P10724 12741835 MOAD: Ki=0.08uM
    2914 1niu:B (2.2) BS01 DCS 5.1.1.1 GO:0003824 ... P10724 12741835 MOAD: Ki=0.08uM
    2915 1niu:B (2.2) BS02 DCS 5.1.1.1 GO:0003824 ... P10724 12741835 MOAD: Ki=0.08uM
    2916 1nj1:A (2.55) BS03 5CA 6.1.1.15 GO:0000166 ... O26708 12578991 PDBbind: -logKd/Ki=7.60, Ki=25nM
    2917 1nj5:A (2.8) BS03 P5A 6.1.1.15 GO:0000166 ... O26708 12578991 PDBbind: -logKd/Ki=7.30, Ki=50nM
    2918 1nja:A (2.5) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    2919 1njb:A (2.74) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8611496 PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    2920 1njc:A (2.5) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=2.8uM
    PDBbind: -logKd/Ki=5.55, Kd=2.8uM
    2921 1njd:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=2.7uM
    PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    2922 1nje:A (2.3) BS01 DCM 2.1.1.45 GO:0004799 ... P00469 8611496 MOAD: Kd=160uM
    PDBbind: -logKd/Ki=3.80, Kd=160uM
    2923 1njf:A (2.3) BS02 AGS 2.7.7.7 GO:0003887 ... P06710 12623013 MOAD: Kd=0.62uM
    PDBbind: -logKd/Ki=6.21, Kd=0.62uM
    2924 1njf:B (2.3) BS02 AGS 2.7.7.7 GO:0003887 ... P06710 12623013 MOAD: Kd=0.62uM
    2925 1njf:C (2.3) BS02 ADP 2.7.7.7 GO:0003887 ... P06710 12623013 MOAD: Kd=1.03uM
    2926 1njf:D (2.3) BS02 AGS 2.7.7.7 GO:0003887 ... P06710 12623013 MOAD: Kd=0.62uM
    2927 1njj:A (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    PDBbind: -logKd/Ki=2.10, Ki=8mM
    2928 1njj:A (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    2929 1njj:B (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    2930 1njj:B (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    2931 1njj:C (2.45) BS01 GET 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Ki=8mM
    2932 1njj:C (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    2933 1njj:D (2.45) BS01 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    2934 1njj:D (2.45) BS02 ORX 4.1.1.17 GO:0003824 ... Q9TZZ6 12672797 MOAD: Kd=0.27mM
    2935 1njs:A (1.98) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 12755606 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    2936 1njs:B (1.98) BS01 KEU 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 12755606 MOAD: Ki=15nM
    2937 1nju:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    2938 1nju:B (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    2939 1nk2:P (-1.00) BS01 dna ? GO:0000981 ... P22808 9154919 PDBbind: Kd=0.19nM
    2940 1nk2:P (-1.00) BS02 dna ? GO:0000981 ... P22808 9154919 PDBbind: Kd=0.19nM
    2941 1nki:A (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    2942 1nki:B (0.95) BS02 PPF 2.5.1.18 GO:0004364 ... Q9I4K6 15504029 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    2943 1nkm:A (2.7) BS01 0FP 3.4.21.97 GO:0004252 ... P16753 12549906 PDBbind: -logKd/Ki=7.30, IC50<0.05uM
    2944 1nkp:A (1.8) BS01 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    2945 1nkp:A (1.8) BS02 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    2946 1nkp:B (1.8) BS01 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    2947 1nkp:B (1.8) BS02 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    2948 1nkp:D (1.8) BS01 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    2949 1nkp:D (1.8) BS02 dna ? GO:0003700 ... P01106 12553908 PDBbind: Kd=90nM
    2950 1nkp:E (1.8) BS01 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    2951 1nkp:E (1.8) BS02 dna ? GO:0046983 ... P61244 12553908 PDBbind: Kd=90nM
    2952 1nl4:B (2.7) BS03 FTL 2.5.1.58 GO:0003824 ... Q02293 12657284 PDBbind: -logKd/Ki=9.41, IC50=0.39nM
    2953 1nl6:A (2.8) BS01 750 3.4.22.38 GO:0006508 ... P43235 11311061 PDBbind: -logKd/Ki=11.32, Ki=4.8pM
    BindingDB: IC50=30nM, Ki=0.0048nM
    2954 1nl6:B (2.8) BS01 750 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: IC50=30nM, Ki=0.0048nM
    2955 1nl9:A (2.4) BS01 989 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    BindingDB: Ki=631nM
    2956 1nli:A (1.93) BS01 ADE 3.2.2.22 GO:0006952 ... P09989 12676436 MOAD: Kd=260uM
    PDBbind: -logKd/Ki=3.59, Kd=260uM
    2957 1nlj:A (2.4) BS01 2CA 3.4.22.38 GO:0006508 ... P43235 11311061 PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    BindingDB: Ki=0.16nM, IC50=70nM
    2958 1nlj:B (2.4) BS01 2CA 3.4.22.38 GO:0006508 ... P43235 11311061 BindingDB: Ki=0.16nM, IC50=70nM
    2959 1nm5:A (2.4) BS01 NAD 7.1.1.1 GO:0000166 ... Q2RSB2 12564924 MOAD: Kd=20uM
    2960 1nm5:B (2.4) BS01 NAD 7.1.1.1 GO:0000166 ... Q2RSB2 12564924 MOAD: Kd=20uM
    2961 1nm6:A (1.8) BS02 L86 3.4.21.5 GO:0004252 ... P00734 12873514 MOAD: Ki=0.09nM
    PDBbind: -logKd/Ki=10.05, Ki=0.09nM
    BindingDB: Ki=0.090000nM
    2962 1nmk:A (2.1) BS01 SFM 5.2.1.8 GO:0000413 ... P62937 12656618 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    2963 1nmk:B (2.1) BS01 SFM 5.2.1.8 GO:0000413 ... P62937 12656618 MOAD: ic50=5.7nM
    2964 1nnb:A (2.8) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 8371267 PDBbind: -logKd/Ki=5.00, Ki=10uM
    BindingDB: IC50=13000nM
    2965 1nnj:A (1.9) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 16243784 PDBbind: Kd=6nM
    2966 1nnj:A (1.9) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 16243784 PDBbind: Kd=6nM
    2967 1nnk:A (1.85) BS02 CE2 ? GO:0015276 ... P19491 12593667 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    2968 1nnu:A (2.5) BS02 TCT 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    2969 1nnu:B (2.5) BS02 TCT 1.3.1.9 GO:0004318 ... Q9BH77 11792710 MOAD: Ki=0.15uM
    2970 1nny:A (2.4) BS01 515 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=20nM
    2971 1no6:A (2.4) BS01 794 3.1.3.48 GO:0004725 ... P18031 12670229 PDBbind: -logKd/Ki=4.41, Ki=39uM
    BindingDB: Ki=39000nM, Kd=26000nM
    2972 1no9:H (1.9) BS02 4ND 3.4.21.5 GO:0004252 ... P00734 12885234 PDBbind: -logKd/Ki=7.62, Ki=24nM
    2973 1noi:A (2.5) BS03 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    2974 1noi:B (2.5) BS03 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    2975 1noi:C (2.5) BS03 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    2976 1noi:D (2.5) BS03 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    2977 1noj:A (2.4) BS04 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    2978 1nok:A (2.4) BS02 NTZ 2.4.1.1 GO:0000166 ... P00489 8652510 MOAD: Ki=700uM
    PDBbind: -logKd/Ki=3.15, Ki=700uM
    2979 1nop:A (2.3) BS03 VO4 3.1.4.- GO:0005634 ... Q9NUW8 12618186 BindingDB: IC50=4000nM
    2980 1nop:B (2.3) BS02 VO4 3.1.4.- GO:0005634 ... Q9NUW8 12618186 BindingDB: IC50=4000nM
    2981 1nox:A (1.59) BS01 FMN 7.1.1.2 GO:0008137 ... Q60049 8846223 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    2982 1np0:D (2.5) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 12662933 BindingDB: Ki=190nM
    2983 1np0:E (2.5) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 12662933 BindingDB: Ki=190nM
    2984 1np0:F (2.5) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 12662933 BindingDB: Ki=190nM
    2985 1npa:A (2.0) BS01 3NH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9258349 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    2986 1npa:B (2.0) BS01 3NH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9258349 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    2987 1npv:A (2.0) BS01 L27 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    2988 1npv:B (2.0) BS01 L27 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    2989 1npw:A (2.0) BS01 LGZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    2990 1npw:B (2.0) BS01 LGZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12723947 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    2991 1npz:A (2.0) BS01 C1P 3.4.22.27 GO:0006508 ... P25774 12641451 PDBbind: -logKd/Ki=7.89, Ki=13nM
    2992 1nq0:A (2.4) BS01 4HY ? GO:0003677 ... P10828 12511610 PDBbind: -logKd/Ki=10.32, IC50=0.048nM
    BindingDB: IC50=0.0407nM
    2993 1nq1:A (2.9) BS01 4HY ? GO:0003677 ... P10828 12511610 BindingDB: IC50=0.0407nM
    2994 1nq2:A (2.4) BS01 4HY ? GO:0003677 ... P10828 12554782 BindingDB: IC50=0.0407nM
    2995 1nq7:A (1.5) BS02 ARL ? GO:0003677 ... P45446 12958591 MOAD: Ki=0.16uM
    PDBbind: -logKd/Ki=6.80, Ki=0.16uM
    2996 1nqc:A (1.8) BS01 C4P 3.4.22.27 GO:0006508 ... P25774 12641451 PDBbind: -logKd/Ki=7.30, Ki=50nM
    2997 1nqm:A (1.7) BS01 BTN ? GO:0009374 ... P22629 12837778 BindingDB: Kd=1.000000nM
    2998 1nqm:B (1.7) BS01 BTN ? GO:0009374 ... P22629 12837778 BindingDB: Kd=1.000000nM
    2999 1nqm:C (1.7) BS01 BTN ? GO:0009374 ... P22629 12837778 BindingDB: Kd=1.000000nM
    3000 1nqm:D (1.7) BS01 BTN ? GO:0009374 ... P22629 12837778 BindingDB: Kd=1.000000nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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