Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2001 1jr0:E (1.3) BS01 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    2002 1jr0:F (1.3) BS01 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    2003 1jr0:G (1.3) BS01 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    2004 1jr0:G (1.3) BS02 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    2005 1jr0:H (1.3) BS01 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    2006 1jr1:A (2.6) BS02 MOA 1.1.1.205 GO:0000166 ... P12269 8681386 PDBbind: -logKd/Ki=8.22, Ki=6nM
    2007 1jsv:A (1.96) BS01 U55 2.7.11.22 GO:0000082 ... P24941 11604388 PDBbind: -logKd/Ki=5.70, Ki=2uM
    BindingDB: IC50=1900nM
    2008 1jt0:A (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2009 1jt0:A (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2010 1jt0:B (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2011 1jt0:B (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2012 1jt0:C (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2013 1jt0:C (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2014 1jt0:D (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2015 1jt0:D (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    2016 1jt1:A (1.78) BS03 MCO 3.5.2.6 N/A Q9K578 12507470 MOAD: Ki=400uM
    PDBbind: -logKd/Ki=3.40, Ki=400uM
    2017 1jtq:A (2.5) BS02 LY3 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    2018 1jtq:B (2.5) BS03 LY3 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    2019 1ju6:A (2.89) BS02 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2020 1ju6:B (2.89) BS03 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2021 1ju6:C (2.89) BS02 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2022 1ju6:D (2.89) BS03 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2023 1ju9:A (2.0) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 11601993 MOAD: Ki=1640uM
    2024 1ju9:B (2.0) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 11601993 MOAD: Ki=1640uM
    2025 1juj:A (3.0) BS02 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 PDBbind: -logKd/Ki=6.96, Ki=109nM
    BindingDB: IC50=9500nM, Ki=1.3nM
    2026 1juj:B (3.0) BS03 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 PDBbind: -logKd/Ki=6.96, Ki=109nM
    BindingDB: IC50=9500nM, Ki=1.3nM
    2027 1juj:C (3.0) BS02 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2028 1juj:D (3.0) BS03 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 BindingDB: IC50=9500nM, Ki=1.3nM
    2029 1jut:A (2.7) BS02 LYD 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=7.32, Ki=47.7nM
    2030 1jut:B (2.7) BS03 LYD 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=7.32, Ki=47.7nM
    2031 1juy:A (2.5) BS03 H5P 6.3.4.4 GO:0000166 ... P0A7D4 8961938 PDBbind: -logKd/Ki=7.66, Ki=22nM
    2032 1jvu:A (1.78) BS01 C2P 4.6.1.18 GO:0003676 ... P61823 11746706 PDBbind: -logKd/Ki=5.15, Ki=7uM
    BindingDB: Ki=7000nM
    2033 1jwt:A (2.5) BS01 BLI 3.4.21.5 GO:0004252 ... P00734 11720865 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    2034 1jys:A (1.9) BS01 ADE 3.2.2.9 GO:0003824 ... P0AF12 11591349 MOAD: Ki=300uM
    PDBbind: -logKd/Ki=3.52, Ki=300uM
    2035 1jys:B (1.9) BS01 ADE 3.2.2.9 GO:0003824 ... P0AF12 11591349 MOAD: Ki=300uM
    PDBbind: -logKd/Ki=3.52, Ki=300uM
    2036 1jyx:A (1.75) BS06 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2037 1jyx:A (1.75) BS07 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2038 1jyx:B (1.75) BS07 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2039 1jyx:C (1.75) BS07 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2040 1jyx:D (1.75) BS06 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2041 1jyx:D (1.75) BS07 IPT 3.2.1.23 GO:0000287 ... P00722 11732897 BindingDB: Ki=7.6e+4nM
    2042 1jz7:A (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2043 1jz7:A (1.5) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2044 1jz7:B (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2045 1jz7:B (1.5) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2046 1jz7:C (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2047 1jz7:C (1.5) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2048 1jz7:D (1.5) BS01 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2049 1jz7:D (1.5) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 11732897 MOAD: Ki~400mM
    2050 1jzs:A (2.5) BS03 MRC 6.1.1.5 GO:0000049 ... P56690 11584022 MOAD: Ki=0.25uM
    PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    2051 1k03:A (2.7) BS02 HBA 1.6.99.1 GO:0003959 ... Q02899 11668181 PDBbind: -logKd/Ki=6.00, Kd=1uM
    2052 1k06:A (1.8) BS01 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    2053 1k06:A (1.8) BS02 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    2054 1k08:A (2.26) BS01 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    2055 1k08:A (2.26) BS02 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    2056 1k0j:A (2.2) BS02 NDP 1.14.13.2 GO:0004497 ... P20586 11805318 MOAD: Ki=1.1mM
    2057 1k0u:A (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2058 1k0u:B (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2059 1k0u:C (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2060 1k0u:D (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2061 1k0u:E (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2062 1k0u:F (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2063 1k0u:G (3.0) BS02 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2064 1k0u:H (3.0) BS03 DEA 3.13.2.1 GO:0001666 ... P10760 11741948 BindingDB: IC50=30nM
    2065 1k1g:A (-1.00) BS01 rna ? GO:0003676 ... Q15637 11691992 PDBbind: Kd=1uM
    2066 1k1i:A (2.2) BS02 FD1 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=264nM
    PDBbind: -logKd/Ki=6.58, Kd=264nM
    BindingDB: Ki=99999999999999nM
    2067 1k1j:A (2.2) BS02 FD2 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    BindingDB: Ki=36nM
    2068 1k1l:A (2.5) BS02 FD3 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=125nM
    PDBbind: -logKd/Ki=6.90, Kd=125nM
    BindingDB: Ki=220nM
    2069 1k1m:A (2.2) BS02 FD4 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    BindingDB: Ki=99999999999999nM
    2070 1k1n:A (2.0) BS02 CCR 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=153nM
    PDBbind: -logKd/Ki=6.82, Kd=153nM
    2071 1k1o:A (2.0) BS02 IGN 3.4.21.4 GO:0004175 ... P00760 11676542 PDBbind: -logKd/Ki=6.17, Ki=675nM
    BindingDB: Ki=675nM
    2072 1k1p:A (1.9) BS02 MEL 3.4.21.4 GO:0004175 ... P00760 11676542 PDBbind: -logKd/Ki=7.92, IC50=11.9nM
    BindingDB: IC50=11nM
    2073 1k21:H (1.86) BS05 IGN 3.4.21.5 GO:0004252 ... P00734 11676542 MOAD: Ki=4.2nM
    PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    BindingDB: Ki=15nM, IC50=1300nM
    2074 1k22:H (1.93) BS05 MEL 3.4.21.5 GO:0004252 ... P00734 11676542 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: IC50=69nM, Ki=1.2nM
    2075 1k27:A (1.95) BS02 MTM 2.4.2.28 GO:0003824 ... Q13126 14705926 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1.0nM
    2076 1k2i:1 (1.8) BS01 SN1 3.4.21.1 GO:0004252 ... P00766 11846564 PDBbind: -logKd/Ki=3.11, IC50=0.78mM
    2077 1k2r:A (2.15) BS03 NRG 1.14.13.39 GO:0004517 ... P29476 N/A BindingDB: IC50=5000nM, Ki=610nM
    2078 1k2r:B (2.15) BS05 NRG 1.14.13.39 GO:0004517 ... P29476 N/A BindingDB: IC50=5000nM, Ki=610nM
    2079 1k2v:N (1.97) BS01 DEF ? GO:0005515 ... P07822 11805094 MOAD: Kd=36uM
    PDBbind: -logKd/Ki=4.44, Kd=36uM
    2080 1k3t:C (1.95) BS01 BRZ 1.2.1.12 GO:0004365 ... P22513 12044862 MOAD: ic50=64uM
    PDBbind: -logKd/Ki=4.19, IC50=64uM
    2081 1k4g:A (1.7) BS02 AIQ 2.4.2.29 GO:0002099 ... P28720 11921407 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    2082 1k4h:A (1.8) BS02 APQ 2.4.2.29 GO:0002099 ... P28720 11921407 MOAD: Ki=7.7uM
    PDBbind: -logKd/Ki=5.11, Ki=7.7uM
    2083 1k5q:B (2.34) BS02 PAC 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=1.1mM
    2084 1k5s:B (2.43) BS02 GRO 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=0.124mM
    2085 1k6c:A (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.48, Kd=33nM
    2086 1k6c:B (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=33nM
    PDBbind: -logKd/Ki=7.48, Kd=33nM
    2087 1k6p:A (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.36, Kd=44nM
    2088 1k6p:B (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.36, Kd=44nM
    2089 1k6t:A (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.62, Kd=24nM
    2090 1k6t:B (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    2091 1k6v:A (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=6.92, Kd=120nM
    2092 1k6v:B (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    2093 1k74:A (2.3) BS02 9CR ? GO:0003677 ... P19793 11698662 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    2094 1k74:D (2.3) BS02 544 ? GO:0003677 ... P37231 11698662 BindingDB: EC50=0.280000nM
    2095 1k7d:B (2.15) BS02 GRO 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=0.47mM
    2096 1k7l:A (2.5) BS02 544 ? GO:0003677 ... Q07869 11698662 BindingDB: EC50=240nM
    2097 1k7l:C (2.5) BS03 544 ? GO:0003677 ... Q07869 11698662 BindingDB: EC50=240nM
    2098 1k7l:E (2.5) BS02 544 ? GO:0003677 ... Q07869 11698662 BindingDB: EC50=240nM
    2099 1k7l:G (2.5) BS02 544 ? GO:0003677 ... Q07869 11698662 BindingDB: EC50=240nM
    2100 1k9s:A (2.0) BS02 FM2 2.4.2.1 GO:0003824 ... P0ABP8 11786017 PDBbind: -logKd/Ki=6.52, Ki=0.30uM
    2101 1k9s:D (2.0) BS01 FM2 2.4.2.1 GO:0003824 ... P0ABP8 11786017 PDBbind: -logKd/Ki=6.52, Ki=0.30uM
    2102 1kak:A (2.5) BS01 FNP 3.1.3.48 GO:0004725 ... P18031 11741477 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    2103 1kav:A (2.35) BS01 FEP 3.1.3.48 GO:0004725 ... P18031 11741477 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    2104 1kbq:A (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2105 1kbq:A (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2106 1kbq:B (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2107 1kbq:B (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2108 1kbq:C (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2109 1kbq:C (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2110 1kbq:D (1.8) BS02 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2111 1kbq:D (1.8) BS04 936 1.6.5.2 GO:0000209 ... P15559 11735396 MOAD: Ki=0.45uM
    BindingDB: Ki=450nM
    2112 1kc7:A (2.2) BS02 PPR 2.7.9.1 GO:0003824 ... P22983 11790099 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3uM
    2113 1kdk:A (1.7) BS01 DHT ? N/A P04278 12054810 MOAD: Kd=0.9nM
    PDBbind: -logKd/Ki=9.05, Kd=0.9nM
    BindingDB: IC50=3.8nM, Kd=0.182000nM
    2114 1kdm:A (2.35) BS02 DHT ? N/A P04278 12054810 BindingDB: IC50=3.8nM, Kd=0.182000nM
    2115 1kds:A (2.15) BS01 NPB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    BindingDB: Ki=1700nM, IC50=5000nM
    2116 1kds:B (2.15) BS01 NPB 3.5.2.6 GO:0008800 ... P00811 12109906 BindingDB: Ki=1700nM, IC50=5000nM
    2117 1kdw:A (2.28) BS01 4CB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.54, Ki=2.9uM
    BindingDB: Ki=2900nM
    2118 1kdw:B (2.28) BS01 4CB 3.5.2.6 GO:0008800 ... P00811 12109906 BindingDB: Ki=2900nM
    2119 1ke0:A (2.3) BS01 CVB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.38, Ki=4.2uM
    BindingDB: Ki=4200nM
    2120 1ke0:B (2.3) BS01 CVB 3.5.2.6 GO:0008800 ... P00811 12109906 BindingDB: Ki=4200nM
    2121 1ke3:A (2.15) BS01 BDB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=6.70, Ki=0.20uM
    BindingDB: Ki=200nM
    2122 1ke3:B (2.15) BS01 BDB 3.5.2.6 GO:0008800 ... P00811 12109906 BindingDB: Ki=200nM
    2123 1ke5:A (2.2) BS01 LS1 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=560nM
    PDBbind: -logKd/Ki=6.25, IC50=560nM
    BindingDB: IC50=560nM
    2124 1ke6:A (2.0) BS01 LS2 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=5.7nM
    2125 1ke7:A (2.0) BS01 LS3 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=8.9nM
    PDBbind: -logKd/Ki=8.05, IC50=8.9nM
    BindingDB: IC50=8.9nM
    2126 1ke8:A (2.0) BS01 LS4 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=1000nM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1000nM
    2127 1ke9:A (2.0) BS01 LS5 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=660nM
    PDBbind: -logKd/Ki=6.18, IC50=660nM
    BindingDB: Kd=210nM, koff=4.97E-02s-1, kon=175033.3M-1-s-1, IC50=660nM
    2128 1kec:B (2.3) BS02 GRO 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=0.2mM
    2129 1kel:H (1.9) BS01 AAH ? N/A P01868 8643580 MOAD: Kd=52nM
    PDBbind: -logKd/Ki=7.28, Kd=52nM
    2130 1kel:L (1.9) BS01 AAH N/A N/A N/A 8643580 PDBbind: -logKd/Ki=7.28, Kd=52nM
    2131 1kf0:A (2.5) BS01 ACP 2.7.2.3 GO:0004618 ... Q7SIB7 12102622 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.80mM
    2132 1kf6:B (2.7) BS04 HQO 1.3.5.1 GO:0005515 ... P0AC47 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    2133 1kf6:C (2.7) BS01 HQO ? GO:0000104 ... P0A8Q0 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    2134 1kf6:D (2.7) BS01 HQO ? GO:0000104 ... P0A8Q3 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    2135 1kfv:A (2.55) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    2136 1kfv:A (2.55) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    2137 1kfv:B (2.55) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    2138 1kfv:B (2.55) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    2139 1kfy:B (3.6) BS04 BRS 1.3.5.1 GO:0005515 ... P0AC47 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    2140 1kfy:C (3.6) BS01 BRS ? GO:0000104 ... P0A8Q0 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    2141 1kfy:D (3.6) BS01 BRS ? GO:0000104 ... P0A8Q3 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    2142 1kjr:A (1.55) BS01 GAL ? GO:0030246 ... P17931 15701008 PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    2143 1kjr:A (1.55) BS02 BEK ? GO:0030246 ... P17931 15701008 PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    2144 1kkq:A (3.0) BS02 471 ? GO:0003677 ... Q07869 11845213 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    2145 1klk:A (2.3) BS01 PMD 1.5.1.3 GO:0004146 ... P16184 12037296 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    2146 1kll:A (1.5) BS01 MC ? N/A O05205 12121648 PDBbind: -logKd/Ki=5.20, Kd=6.3uM
    2147 1kly:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2148 1km0:A (1.7) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2149 1km0:A (1.7) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2150 1km0:B (1.7) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2151 1km0:B (1.7) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2152 1km0:C (1.7) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2153 1km0:C (1.7) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2154 1km0:D (1.7) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2155 1km0:D (1.7) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2156 1km1:A (1.6) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2157 1km1:A (1.6) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2158 1km1:B (1.6) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2159 1km1:B (1.6) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2160 1km2:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2161 1km3:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 PDBbind: -logKd/Ki=4.91, Ki=12.4uM
    BindingDB: Ki=12400nM
    2162 1km5:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 BindingDB: Ki=12400nM
    2163 1kms:A (1.09) BS01 LIH 1.5.1.3 GO:0000900 ... P00374 12096917 BindingDB: IC50=0.98nM
    2164 1kmv:A (1.05) BS01 LII 1.5.1.3 GO:0000900 ... P00374 12096917 PDBbind: -logKd/Ki=6.95, IC50=112nM
    2165 1kmy:A (2.0) BS02 BPY 1.13.11.39 GO:0003824 ... P47228 9857017 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    2166 1knr:A (2.5) BS01 FAD 1.4.3.16
    1.5.99.-    		 GO:0000166 ... P10902 11863440 MOAD: Kd=8.1uM
    2167 1knu:A (2.5) BS01 YPA ? GO:0003677 ... P37231 11831892 BindingDB: EC50=170nM, Kd=170nM
    2168 1knz:A (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2169 1knz:B (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2170 1knz:C (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2171 1knz:D (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2172 1knz:I (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2173 1knz:J (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2174 1knz:M (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2175 1knz:N (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    2176 1kog:A (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2177 1kog:A (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2178 1kog:B (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2179 1kog:B (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2180 1kog:C (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2181 1kog:C (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2182 1kog:D (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2183 1kog:D (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2184 1kog:E (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2185 1kog:E (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2186 1kog:F (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2187 1kog:F (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2188 1kog:G (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2189 1kog:H (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    2190 1koj:A (1.9) BS01 PAN 5.3.1.9 GO:0004347 ... Q9N1E2 11983887 MOAD: Ki=0.2uM
    BindingDB: Ki=100nM
    2191 1koj:B (1.9) BS01 PAN 5.3.1.9 GO:0004347 ... Q9N1E2 11983887 MOAD: Ki=0.2uM
    BindingDB: Ki=100nM
    2192 1kpm:A (1.8) BS01 VIT 3.1.1.4 GO:0004623 ... P59071 12079380 MOAD: Ki=1.59uM
    PDBbind: -logKd/Ki=5.80, Ki=1.59uM
    2193 1kq2:A (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2194 1kq2:B (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2195 1kq2:H (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2196 1kq2:I (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2197 1kq2:K (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2198 1kq2:M (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    2199 1kqq:A (-1.00) BS01 dna ? GO:0003677 ... Q24573 11867548 PDBbind: Kd=28nM
    2200 1kqq:A (-1.00) BS02 dna ? GO:0003677 ... Q24573 11867548 PDBbind: Kd=28nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218