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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1801 1io4:A (3.0) BS02 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1802 1io4:B (3.0) BS01 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1803 1io4:B (3.0) BS02 dna ? GO:0003700 ... P17676 11257229 PDBbind: Kd=7.56nM
    1804 1io4:C (3.0) BS01 dna ? GO:0003677 ... Q03347 11257229 PDBbind: Kd=7.56nM
    1805 1io4:C (3.0) BS02 dna ? GO:0003677 ... Q03347 11257229 PDBbind: Kd=7.56nM
    1806 1ipc:A (2.0) BS01 MGP ? GO:0000082 ... P06730 11879179 BindingDB: Ki=28nM
    1807 1iss:A (3.3) BS01 MCG ? GO:0004930 ... P23385 11867751 BindingDB: Ki=>10000nM
    1808 1iss:B (3.3) BS01 MCG ? GO:0004930 ... P23385 11867751 BindingDB: Ki=>10000nM
    1809 1it6:A (2.0) BS03 CYU 3.1.3.16 GO:0000070 ... P36873 12015153 MOAD: Ki=4.1nM
    PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    1810 1it6:B (2.0) BS03 CYU 3.1.3.16 GO:0000070 ... P36873 12015153 MOAD: Ki=4.1nM
    1811 1iup:A (1.6) BS01 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1812 1iup:A (1.6) BS02 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1813 1iup:A (1.6) BS03 ALQ 3.7.1.9 GO:0003824 ... P96965 12192074 MOAD: Ki=2.9mM
    PDBbind: -logKd/Ki=2.54, Ki=2.9mM
    1814 1iut:A (2.0) BS02 PAB 1.14.13.2 GO:0004497 ... P20586 8555229 MOAD: Kd=24uM
    1815 1iuu:A (2.0) BS02 PAB 1.14.13.2 GO:0004497 ... P20586 8555229 MOAD: Kd=147uM
    1816 1ivp:A (2.5) BS01 1ZK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 8514751 PDBbind: -logKd/Ki=7.52, Ki=30nM
    1817 1ivp:B (2.5) BS01 1ZK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 8514751 MOAD: Ki=30nM
    PDBbind: -logKd/Ki=7.52, Ki=30nM
    1818 1iwi:A (2.0) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 14661963 MOAD: Kd=22uM
    1819 1iwj:A (2.0) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 14661963 MOAD: Kd=79uM
    1820 1iwo:A (3.1) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 12167852 BindingDB: Kd=0.200000nM, IC50=0.2nM
    1821 1iwo:B (3.1) BS01 TG1 7.2.2.10 GO:0000166 ... P04191 12167852 BindingDB: Kd=0.200000nM, IC50=0.2nM
    1822 1ixi:A (1.89) BS01 2HP ? GO:0006817 ... P0AG82 9228942 MOAD: Kd=0.36uM
    1823 1iy7:A (2.0) BS02 CXA 3.4.17.1 GO:0004181 ... P00730 12431056 MOAD: Ki=0.64uM
    PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    1824 1iy8:A (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1825 1iy8:B (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1826 1iy8:C (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1827 1iy8:D (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1828 1iy8:E (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1829 1iy8:F (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1830 1iy8:G (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1831 1iy8:H (1.6) BS01 NAD 1.1.1.- GO:0016491 ... Q9LBG2 12621044 MOAD: Ki=23.8mM
    1832 1iyk:A (2.3) BS02 MIM 2.3.1.97 GO:0004379 ... P30418 12401496 MOAD: Ki=0.25uM
    BindingDB: Ki=31nM
    1833 1iyk:B (2.3) BS02 MIM 2.3.1.97 GO:0004379 ... P30418 12401496 MOAD: Ki=0.25uM
    BindingDB: Ki=31nM
    1834 1iyl:A (3.2) BS01 R64 2.3.1.97 GO:0004379 ... P30418 12401496 PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    1835 1iyl:B (3.2) BS01 R64 2.3.1.97 GO:0004379 ... P30418 12401496 BindingDB: IC50=1nM
    1836 1iyl:C (3.2) BS01 R64 2.3.1.97 GO:0004379 ... P30418 12401496 BindingDB: IC50=1nM
    1837 1izh:A (1.9) BS01 Q50 3.4.23.16 GO:0004190 ... Q90EB9 12460574 PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    1838 1izh:B (1.9) BS01 Q50 3.4.23.16 GO:0004190 ... Q90EB9 12460574 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    1839 1izi:A (2.15) BS01 Q50 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12460574 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    1840 1izi:B (2.15) BS01 Q50 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12460574 MOAD: Ki=0.26nM
    PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    1841 1j01:A (2.0) BS01 XIL 3.2.1.8
    3.2.1.91    		 GO:0004553 ... P07986 N/A MOAD: Ki=0.34uM
    PDBbind: -logKd/Ki=6.47, Ki=0.34uM
    1842 1j07:A (2.35) BS02 DCU 3.1.1.7 GO:0001919 ... P21836 12505979 MOAD: Ki=0.021uM
    PDBbind: -logKd/Ki=7.68, Ki=0.021uM
    1843 1j07:B (2.35) BS02 DCU 3.1.1.7 GO:0001919 ... P21836 12505979 MOAD: Ki=0.021uM
    1844 1j0x:P (2.4) BS01 NAD 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P46406 14646080 MOAD: Kd=0.01uM
    1845 1j0x:R (2.4) BS01 NAD 1.2.1.12
    2.6.99.-    		 GO:0000226 ... P46406 14646080 MOAD: Kd=0.01uM
    1846 1j14:A (2.4) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=32.2uM
    PDBbind: -logKd/Ki=4.49, Ki=32.2uM
    1847 1j15:A (2.0) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1848 1j16:A (1.6) BS02 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1849 1j16:A (1.6) BS03 BEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=143uM
    PDBbind: -logKd/Ki=3.84, Ki=143uM
    1850 1j17:T (2.0) BS02 ZEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=6.05uM
    PDBbind: -logKd/Ki=5.22, Ki=6.05uM
    1851 1j1a:A (2.2) BS03 BHP 3.1.1.4 GO:0004623 ... P14555 12616631 MOAD: ic50=0.029uM
    PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    1852 1j1a:B (2.2) BS03 BHP 3.1.1.4 GO:0004623 ... P14555 12616631 MOAD: ic50=0.029uM
    PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    1853 1j36:A (2.4) BS02 LPR 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    1854 1j36:B (2.4) BS02 LPR 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=18nM
    1855 1j37:A (2.4) BS02 X8Z 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    1856 1j37:B (2.4) BS02 X8Z 3.4.15.1 GO:0006508 ... Q10714 12633854 MOAD: Ki=1.1nM
    1857 1j3i:A (2.33) BS01 WRA 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=0.011nM
    BindingDB: IC50=0.570000nM, Ki=0.5nM
    1858 1j3i:B (2.33) BS01 WRA 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=0.011nM
    BindingDB: IC50=0.570000nM, Ki=0.5nM
    1859 1j3j:A (2.3) BS01 CP6 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=9.8nM
    BindingDB: Ki=0.6nM, IC50=30900nM
    1860 1j3j:B (2.3) BS01 CP6 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=9.8nM
    BindingDB: Ki=0.6nM, IC50=30900nM
    1861 1j3k:A (2.1) BS01 WRA 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=0.037nM
    BindingDB: IC50=0.570000nM, Ki=0.5nM
    1862 1j3k:B (2.1) BS01 WRA 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 12704428 MOAD: Ki=0.037nM
    BindingDB: IC50=0.570000nM, Ki=0.5nM
    1863 1j4r:A (1.8) BS01 001 5.2.1.8 GO:0000413 ... P62942 11735566 MOAD: Ki=0.019uM
    PDBbind: -logKd/Ki=7.72, Ki=0.019uM
    1864 1j4r:B (1.8) BS01 001 5.2.1.8 GO:0000413 ... P62942 11735566 MOAD: Ki=0.019uM
    1865 1j4r:D (1.8) BS01 001 5.2.1.8 GO:0000413 ... P62942 11735566 MOAD: Ki=0.019uM
    1866 1j5a:K (3.5) BS01 rna ? GO:0003735 ... Q9RXK1 11677599 PDBbind: Kd=10nM
    1867 1j5a:L (3.5) BS01 rna ? GO:0003735 ... Q9RXJ7 11677599 PDBbind: Kd=10nM
    1868 1j5a:M (3.5) BS01 rna ? GO:0003735 ... P49228 11677599 PDBbind: Kd=10nM
    1869 1j5i:A (-1.00) BS01 NCZ ? GO:0003677 ... P0A3R9 12269815 PDBbind: -logKd/Ki=3.64, Kd=230uM
    1870 1j5k:A (-1.00) BS01 dna ? GO:0003676 ... P61978 12093748 PDBbind: Kd=3uM
    1871 1j5n:A (-1.00) BS01 dna ? GO:0001195 ... P11632 12381320 PDBbind: Kd=7.5nM
    1872 1j5n:A (-1.00) BS02 dna ? GO:0001195 ... P11632 12381320 PDBbind: Kd=7.5nM
    1873 1j75:A (1.85) BS01 dna ? GO:0003677 ... Q9QY24 11524677 PDBbind: Kd=35nM
    1874 1j8v:A (2.4) BS01 LAM 3.2.1.21 GO:0004553 ... Q9XEI3 12034895 MOAD: Ki=243.2uM
    1875 1ja9:A (1.5) BS02 PYQ ? GO:0000166 ... Q9HFV6 11467929 MOAD: Ki=420nM
    1876 1jak:A (1.75) BS02 IFG 3.2.1.52 GO:0004553 ... O85361 11522797 MOAD: Ki=2.7uM
    PDBbind: -logKd/Ki=5.57, Ki=2.7uM
    1877 1jao:A (2.4) BS01 0D3 3.4.24.34 GO:0004222 ... P22894 7737183 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    1878 1jaq:A (2.4) BS02 01S 3.4.24.34 GO:0004222 ... P22894 7737183 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    BindingDB: Ki=121000nM
    1879 1jbr:A (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244 PDBbind: Kd=1uM
    1880 1jbr:B (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244 PDBbind: Kd=1uM
    1881 1jcq:A (2.3) BS02 FPP 2.5.1.58
    2.5.1.59    		 GO:0004659 ... P49354 11687658 BindingDB: Kd=2.0nM
    1882 1jcx:A (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    PDBbind: -logKd/Ki=5.15, Ki=7.0uM
    1883 1jcx:B (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    PDBbind: -logKd/Ki=5.15, Ki=7.0uM
    1884 1jd0:A (1.5) BS02 AZM 4.2.1.1 GO:0004089 ... O43570 11493685 PDBbind: -logKd/Ki=8.24, Ki=5.7nM
    BindingDB: Ki=5.7nM, Kd=130nM, IC50=60nM
    1885 1jd0:B (1.5) BS02 AZM 4.2.1.1 GO:0004089 ... O43570 11493685 BindingDB: Ki=5.7nM, Kd=130nM, IC50=60nM
    1886 1jdj:A (2.2) BS01 CFP 1.1.1.8 GO:0005829 ... P90551 12445769 PDBbind: -logKd/Ki=2.30, IC50=5mM
    1887 1je8:A (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1888 1je8:A (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1889 1je8:B (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1890 1je8:B (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1891 1je8:E (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1892 1je8:E (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1893 1je8:F (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1894 1je8:F (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1895 1jey:A (2.5) BS01 dna 3.6.4.-
    4.2.99.-    		 GO:0000723 ... P12956 11493912 PDBbind: Kd=0.15nM
    1896 1jey:A (2.5) BS02 dna 3.6.4.-
    4.2.99.-    		 GO:0000723 ... P12956 11493912 PDBbind: Kd=0.15nM
    1897 1jey:B (2.5) BS01 dna 3.6.4.- GO:0000723 ... P13010 11493912 PDBbind: Kd=0.15nM
    1898 1jey:B (2.5) BS02 dna 3.6.4.- GO:0000723 ... P13010 11493912 PDBbind: Kd=0.15nM
    1899 1jfh:A (2.03) BS01 MA3 3.2.1.1 GO:0003824 ... P00690 9385631 PDBbind: -logKd/Ki=2.05, Ki=9mM
    1900 1jfh:A (2.03) BS02 MA2 3.2.1.1 GO:0003824 ... P00690 9385631 PDBbind: -logKd/Ki=2.05, Ki=9mM
    1901 1jfs:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=2.2nM
    1902 1jft:A (2.5) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=0.7nM
    1903 1jg0:A (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5.0uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    1904 1jg0:B (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5.0uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    1905 1jgl:H (2.15) BS01 EST N/A N/A N/A 11451948 PDBbind: -logKd/Ki=8.70, Kd=2nM
    1906 1jgl:L (2.15) BS01 EST ? N/A Q7TS98 11451948 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2nM
    1907 1jh1:A (2.7) BS05 JST 3.4.24.34 GO:0004222 ... P22894 11563922 PDBbind: -logKd/Ki=4.39, Ki=41uM
    1908 1jh9:A (2.55) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=2nM
    1909 1jif:A (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1910 1jif:A (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1911 1jif:B (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1912 1jif:B (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1913 1jii:A (3.2) BS01 383 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=9.00, IC50=1nM
    1914 1jij:A (3.2) BS01 629 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=8.52, IC50=3nM
    1915 1jik:A (2.8) BS01 545 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    1916 1jil:A (2.2) BS01 485 6.1.1.1 GO:0000166 ... A6QHR2 11567092 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    1917 1jiz:A (2.6) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 11575929 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1918 1jj4:A (2.4) BS01 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1919 1jj4:A (2.4) BS02 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1920 1jj4:B (2.4) BS01 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1921 1jj4:B (2.4) BS02 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1922 1jj9:A (2.0) BS05 BBT 3.4.24.34 GO:0004222 ... P22894 11278347 MOAD: ic50=1700nM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    1923 1jje:A (1.8) BS04 BYS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.0037uM
    PDBbind: -logKd/Ki=8.43, IC50=3.7nM
    1924 1jje:B (1.8) BS04 BYS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.0037uM
    1925 1jjk:A (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1926 1jjk:A (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1927 1jjk:B (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1928 1jjk:B (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1929 1jjt:A (1.8) BS04 BDS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    1930 1jjt:B (1.8) BS04 BDS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.009uM
    1931 1jk1:A (1.9) BS01 dna ? N/A P08046 11800559 PDBbind: Kd=26pM
    1932 1jk1:A (1.9) BS02 dna ? N/A P08046 11800559 PDBbind: Kd=26pM
    1933 1jk2:A (1.65) BS01 dna ? N/A P08046 11800559 PDBbind: Kd=43pM
    1934 1jk2:A (1.65) BS02 dna ? N/A P08046 11800559 PDBbind: Kd=43pM
    1935 1jk7:A (1.9) BS03 OKA 3.1.3.16 GO:0000070 ... P36873 11535607 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=>5000nM
    1936 1jkh:A (2.5) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 11575933 BindingDB: IC50=25nM, Ki=30nM
    1937 1jki:A (2.2) BS01 DG6 5.5.1.4 GO:0004512 ... P11986 11779862 MOAD: Ki=6uM
    1938 1jki:B (2.2) BS01 DG6 5.5.1.4 GO:0004512 ... P11986 11779862 MOAD: Ki=6uM
    1939 1jko:C (2.24) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=7.6nM
    1940 1jko:C (2.24) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=7.6nM
    1941 1jkp:C (2.8) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=2.05nM
    1942 1jkp:C (2.8) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=2.05nM
    1943 1jkq:C (2.86) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=27.1nM
    1944 1jkq:C (2.86) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=27.1nM
    1945 1jkr:C (2.28) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=97.4nM
    1946 1jkr:C (2.28) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=97.4nM
    1947 1jkx:A (1.6) BS01 138 2.1.2.2 GO:0003824 ... P08179 11695901 MOAD: Ki=20uM
    1948 1jkx:B (1.6) BS01 138 2.1.2.2 GO:0003824 ... P08179 11695901 MOAD: Ki=20uM
    1949 1jkx:C (1.6) BS01 138 2.1.2.2 GO:0003824 ... P08179 11695901 MOAD: Ki=20uM
    1950 1jkx:D (1.6) BS01 138 2.1.2.2 GO:0003824 ... P08179 11695901 MOAD: Ki=20uM
    1951 1jld:A (2.5) BS01 0PP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 9216835 MOAD: ic50=185nM
    PDBbind: -logKd/Ki=6.73, IC50=185nM
    1952 1jld:B (2.5) BS01 0PP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 9216835 PDBbind: -logKd/Ki=6.73, IC50=185nM
    1953 1jlq:A (3.0) BS01 SBN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 11384233 PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    1954 1jlr:A (2.45) BS02 GTP 2.4.2.9 GO:0004845 ... Q26998 11773618 MOAD: Kd=465uM
    1955 1jlr:B (2.45) BS02 GTP 2.4.2.9 GO:0004845 ... Q26998 11773618 MOAD: Kd=465uM
    1956 1jlr:B (2.45) BS03 GTP 2.4.2.9 GO:0004845 ... Q26998 11773618 MOAD: Kd=465uM
    1957 1jlr:C (2.45) BS01 GTP 2.4.2.9 GO:0004845 ... Q26998 11773618 MOAD: Kd=465uM
    1958 1jlr:D (2.45) BS02 GTP 2.4.2.9 GO:0004845 ... Q26998 11773618 MOAD: Kd=465uM
    1959 1jlx:A (2.2) BS01 GAL ? N/A Q71QF2 9334739 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    1960 1jlx:B (2.2) BS01 GAL ? N/A Q71QF2 9334739 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    1961 1jmf:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    1962 1jmg:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=0.85uM
    PDBbind: -logKd/Ki=6.07, Kd=0.85uM
    1963 1jmi:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=0.87uM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    1964 1jn2:P (1.9) BS03 SFP ? GO:0030246 ... P02866 11504727 MOAD: Ka=12200M^-1
    PDBbind: -logKd/Ki=4.09, Kd=82uM
    1965 1jn4:A (1.8) BS01 139 4.6.1.18 GO:0003676 ... P61823 11513604 MOAD: Ki=11.3uM
    PDBbind: -logKd/Ki=4.95, Ki=11.3uM
    1966 1joc:A (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    1967 1joc:B (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    1968 1jpz:A (1.65) BS02 140 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 11695892 MOAD: Kd=262nM
    BindingDB: Kd=82nM
    1969 1jpz:B (1.65) BS02 140 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 11695892 MOAD: Kd=262nM
    BindingDB: Kd=82nM
    1970 1jq3:A (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    1971 1jq3:C (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    1972 1jq3:D (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    1973 1jqd:A (2.28) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 MOAD: Ki=6.9uM
    PDBbind: -logKd/Ki=5.16, Ki=6.9uM
    BindingDB: Ki=18100nM
    1974 1jqd:B (2.28) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 MOAD: Ki=6.9uM
    BindingDB: Ki=18100nM
    1975 1jqe:A (1.91) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 BindingDB: Ki=18100nM
    1976 1jqe:A (1.91) BS02 QUN 2.1.1.8 GO:0001692 ... P50135 11566133 PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    1977 1jqe:B (1.91) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 BindingDB: Ki=18100nM
    1978 1jqy:D (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1979 1jqy:D (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1980 1jqy:E (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1981 1jqy:E (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1982 1jqy:F (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1983 1jqy:F (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1984 1jqy:G (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1985 1jqy:G (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1986 1jqy:H (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1987 1jqy:L (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1988 1jqy:L (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1989 1jqy:M (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1990 1jqy:O (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1991 1jqy:P (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1992 1jqy:P (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1993 1jqy:V (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1994 1jqy:W (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1995 1jqy:W (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1996 1jqy:X (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1997 1jqy:Y (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1998 1jqy:Z (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    1999 1jqy:Z (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    2000 1jr0:D (1.3) BS01 A24 ? GO:0005515 ... P01556 11880036 MOAD: Kd=12uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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