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BioLiP Library
>protein
SEELEKALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRTRKLRDFLE

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7rdq:F 349 73 0.9589 0.2006 0.9589 1.31e-42 2a68:F, 2a68:P, 2a69:F, 2a69:P, 6cuu:F, 5d4c:F, 5d4c:P, 5d4d:F, 5d4d:P, 5d4e:F, 5d4e:P, 5e17:F, 5e18:F, 7eh0:F, 7eh1:F, 7eh2:F, 7eh2:P, 4g7h:F, 4g7h:P, 4g7o:F, 4g7o:P, 4g7z:F, 4g7z:P, 5i2d:F, 5i2d:Q, 1iw7:F, 1iw7:P, 4ki2:A, 4ki2:B, 6kqd:F, 6kqd:P, 6kqe:F, 6kqf:F, 6kqg:F, 6kqh:F, 6kql:F, 6kqm:F, 6kqn:F, 1ku7:A, 6l74:F, 6lts:F, 7mlb:F, 7mli:F, 7mlj:F, 3n97:A, 4oin:F, 4oio:F, 4oip:F, 4oiq:F, 4oir:F, 6ovr:F, 6ovy:F, 6ow3:F, 6oy5:F, 6oy6:F, 6oy7:F, 6p70:F, 6p71:F, 4q4z:F, 4q5s:F, 1rio:H, 1smy:F, 5tjg:F, 3ugo:A, 3ugp:A, 5vo8:F, 5voi:F, 8w8n:F, 8w8o:F, 8w8p:F, 6wox:F, 6woy:F, 5x21:F, 5x22:F, 5x22:P, 4xln:F, 4xln:L, 4xlp:F, 4xlp:L, 4xlq:F, 4xlq:L, 4xlr:F, 4xlr:L, 4xls:F, 4xls:L
2 7ckq:F 272 72 0.6438 0.1728 0.6528 4.26e-23 7f75:F, 8x6f:E
3 8cwr:B 109 72 0.5342 0.3578 0.5417 7.36e-22 8cwt:B, 8cwt:D, 8cwt:F, 8cyf:B, 7kuf:B
4 7l7b:F 272 71 0.6301 0.1691 0.6479 2.75e-21
5 8k60:F 315 71 0.5616 0.1302 0.5775 3.45e-20 8dy7:F, 8dy9:F, 8hvr:F, 8jke:F, 7vpd:F, 7vpz:F, 7x74:F, 7x75:F, 7x76:F
6 6bzo:F 326 71 0.5342 0.1196 0.5493 8.52e-20 6c04:F, 6cce:F, 6ccv:F, 6dcf:F, 6edt:F, 6ee8:F, 6eec:F, 6fbv:F, 8hih:F, 7kif:F, 7kim:F, 7kin:F, 6m7j:F, 6ono:B, 6ono:D, 6onu:B, 6onu:D, 6onu:F, 6onu:H, 7p5x:AF, 5tw1:F, 7u22:F, 5uh5:F, 5uh6:F, 5uh8:F, 5uh9:F, 5uha:F, 5uhb:F, 5uhc:F, 5uhd:F, 5uhe:F, 5uhf:F, 5uhg:F, 5vi5:F, 5vi8:F, 6vvs:F, 6vvt:F, 6vvv:F, 6vvx:F, 6vvy:F, 6vvz:F, 6vw0:F
7 7ye1:F 497 72 0.6027 0.0885 0.6111 6.04e-19 7ye2:F, 5yix:A
8 8h3v:G 314 71 0.5753 0.1338 0.5915 1.61e-18 8h40:G
9 8gzg:F 314 71 0.5616 0.1306 0.5775 6.04e-18 8gzh:F
10 3iyd:F 479 66 0.5616 0.0856 0.6212 3.74e-17
11 6wmr:Z 470 62 0.5616 0.0872 0.6613 1.16e-16 6wmt:Z
12 6psr:L 548 67 0.5479 0.0730 0.5970 1.49e-16 6n58:L, 6n61:F
13 6n4c:F 558 67 0.5479 0.0717 0.5970 1.61e-16 8ad1:F, 6b6h:F, 7bef:F, 7beg:F, 7c17:F, 7c97:F, 6ca0:F, 7chw:F, 7dy6:F, 8ftd:L, 6jnx:F, 8jo2:F, 6k4y:F, 7khb:F, 7khc:F, 7khe:F, 7khi:F, 6ldi:F, 7mkd:L, 7mke:L, 7mki:L, 7mkj:L, 7n4e:F, 6n57:L, 6n62:F, 6oul:L, 6p18:F, 2p7v:B, 6pb4:F, 6pb5:F, 6pb6:F, 6psq:L, 6pss:L, 6pst:L, 6psu:L, 6psv:L, 6psw:L, 7szj:F, 8to1:L, 8to6:L, 8to8:L, 8toe:L, 8tom:L, 5vt0:L, 7vwy:F, 7vwz:F, 7w5w:F, 7w5x:F, 7w5y:F, 6wmu:F, 6xh7:F, 6xh8:F, 6xl5:F, 6xl9:F, 6xlj:F, 6xll:F, 8y6u:F, 4yln:F, 4yln:L, 4yln:R, 4ylo:F, 4ylo:L, 4ylo:R, 4ylp:F, 4ylp:L, 4ylp:R
14 8u3b:F 431 67 0.5479 0.0928 0.5970 1.99e-16
15 6n60:F 318 65 0.5342 0.1226 0.6000 7.93e-16 8igr:L, 8igs:L
16 4kn7:X 517 63 0.5205 0.0735 0.6032 8.12e-15
17 7ubm:F 353 48 0.4247 0.0878 0.6458 6.48e-12 7ubn:F
18 7f0r:F 278 59 0.3425 0.0899 0.4237 1.01e-07
19 6ido:A 86 58 0.3288 0.2791 0.4138 1.44e-06 6ido:B
20 6omf:F 278 58 0.3288 0.0863 0.4138 4.46e-06 5ipl:F, 5ipm:F, 5ipn:F, 6kj6:F, 6utv:FFF, 6utw:FFF, 6utx:FFF, 6uty:FFF, 6utz:FFF, 6uu0:FFF, 6uu1:FFF, 6uu2:FFF, 6uu3:FFF, 6uu4:FFF, 6uu5:FFF, 6uu6:FFF, 6uu7:FFF, 6uu8:FFF, 6uu9:FFF, 6uua:FFF, 6uub:FFF, 6uuc:FFF
21 8hkc:E 262 56 0.2740 0.0763 0.3571 2.33e-04
22 6pfv:G 223 56 0.2740 0.0897 0.3571 0.007 6pfj:A, 6pfv:A, 6pfv:D
23 7lq4:A 192 65 0.3288 0.1250 0.3692 0.21
24 5jrj:A 306 60 0.2466 0.0588 0.3000 1.4
25 1v29:A 203 28 0.1781 0.0640 0.4643 2.8 2dpp:A, 3hht:A, 7qom:A, 7qop:A, 7qou:A, 7qov:A, 7qoy:A, 7z0v:A
26 6tr4:A 506 34 0.1644 0.0237 0.3529 4.2 6tr3:A, 6tr4:B
27 8f6k:B 287 25 0.1507 0.0383 0.4400 6.0 8f6e:A, 8f6e:B, 8f6f:A, 8f6f:B, 8f6h:A, 8f6h:B, 8f6i:B, 8f6i:A, 8f6j:B, 8f6j:A, 8f6k:A, 8f6k:C, 8f6k:D, 7kzz:B, 7kzz:A, 5vrf:B, 5vrf:A
28 2iry:A 288 22 0.1370 0.0347 0.4545 8.5 2irx:A, 2iry:B, 4mky:B, 4mky:A, 4mky:C, 4mky:D, 3pky:A, 3pky:B, 2r9l:A, 2r9l:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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