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BioLiP Library
Download all results in tab-seperated text for 206 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 3d5z:A (1.9) BS01 FUB 3.2.1.99 GO:0004553 ... B3EYM8 19505290
    2 3d61:A (1.95) BS01 FUB 3.2.1.99 GO:0004553 ... B3EYM8 19505290
    3 3wkx:A (2.0) BS01 FUB 3.2.1.185 GO:0000272 ... E8MGH8 24680821
    4 3wn0:A (1.9) BS02 FUB 3.2.1.55 GO:0005576 ... O54161 24482228
    5 3wrg:A (2.23) BS01 FUB 3.2.1.185 GO:0000272 ... E8MGH8 N/A
    6 4n2r:A (1.2) BS02 FUB N/A GO:0046373 ... N/A 24394409
    7 5glo:A (1.8) BS02 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    8 5glo:B (1.8) BS02 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    9 5glq:A (1.7) BS04 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    10 5glq:B (1.7) BS04 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    11 5glr:A (1.7) BS04 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    12 5glr:B (1.7) BS03 FUB ? GO:0004553 ... A0A0H5BL38 28204531
    13 5mui:A (1.77) BS02 FUB ? N/A Q8A921 28329766
    14 5ocp:A (1.7) BS02 FUB ? GO:0030246 ... A0KWY4 N/A
    15 5ocp:B (1.7) BS02 FUB ? GO:0030246 ... A0KWY4 N/A
    16 5z5f:A (2.1) BS02 FUB 3.2.1.37 GO:0004553 ... Q2I2N4 29698436 PDBbind: -logKd/Ki=2.17, Ki=6.8mM
    17 5z5i:A (1.7) BS02 FUB 3.2.1.37 GO:0004553 ... Q2I2N4 29698436
    18 6lce:A (1.78) BS02 FUB ? N/A A0A0A1GL90 32246585
    19 6lcf:A (1.92) BS01 FUB ? N/A A0A0A1GL90 32246585
    20 6lcf:A (1.92) BS02 FUB ? N/A A0A0A1GL90 32246585
    21 6lcf:B (1.92) BS01 FUB ? N/A A0A0A1GL90 32246585
    22 6lcf:B (1.92) BS02 FUB ? N/A A0A0A1GL90 32246585
    23 8wa2:A (3.0) BS01 FUB ? N/A A8J9H7 38552612
    24 8wa2:A (3.0) BS02 FUB ? N/A A8J9H7 38552612
    25 8wa2:A (3.0) BS03 FUB ? N/A A8J9H7 38552612
    26 8wa2:A (3.0) BS05 FUB ? N/A A8J9H7 38552612
    27 8wa2:A (3.0) BS06 FUB ? N/A A8J9H7 38552612
    28 8wa2:A (3.0) BS08 FUB ? N/A A8J9H7 38552612
    29 8wa2:A (3.0) BS09 FUB ? N/A A8J9H7 38552612
    30 8wa2:A (3.0) BS10 FUB ? N/A A8J9H7 38552612
    31 8wa2:A (3.0) BS11 FUB ? N/A A8J9H7 38552612
    32 8wa2:A (3.0) BS12 FUB ? N/A A8J9H7 38552612
    33 8wa2:A (3.0) BS13 FUB ? N/A A8J9H7 38552612
    34 8wa2:A (3.0) BS14 FUB ? N/A A8J9H7 38552612
    35 8wa2:A (3.0) BS15 FUB ? N/A A8J9H7 38552612
    36 8wa2:A (3.0) BS16 FUB ? N/A A8J9H7 38552612
    37 8wa2:A (3.0) BS17 FUB ? N/A A8J9H7 38552612
    38 8wa2:A (3.0) BS18 FUB ? N/A A8J9H7 38552612
    39 8wa2:A (3.0) BS19 FUB ? N/A A8J9H7 38552612
    40 8wa2:A (3.0) BS20 FUB ? N/A A8J9H7 38552612
    41 8wa2:A (3.0) BS21 FUB ? N/A A8J9H7 38552612
    42 8wa2:A (3.0) BS22 FUB ? N/A A8J9H7 38552612
    43 8wa2:A (3.0) BS23 FUB ? N/A A8J9H7 38552612
    44 8wa2:A (3.0) BS26 FUB ? N/A A8J9H7 38552612
    45 8wa2:B (3.0) BS01 FUB ? N/A A8J9H7 38552612
    46 8wa2:B (3.0) BS02 FUB ? N/A A8J9H7 38552612
    47 8wa2:B (3.0) BS03 FUB ? N/A A8J9H7 38552612
    48 8wa2:B (3.0) BS04 FUB ? N/A A8J9H7 38552612
    49 8wa2:B (3.0) BS06 FUB ? N/A A8J9H7 38552612
    50 8wa2:B (3.0) BS07 FUB ? N/A A8J9H7 38552612
    51 8wa2:B (3.0) BS08 FUB ? N/A A8J9H7 38552612
    52 8wa2:B (3.0) BS09 FUB ? N/A A8J9H7 38552612
    53 8wa2:B (3.0) BS10 FUB ? N/A A8J9H7 38552612
    54 8wa2:B (3.0) BS11 FUB ? N/A A8J9H7 38552612
    55 8wa2:B (3.0) BS12 FUB ? N/A A8J9H7 38552612
    56 8wa2:B (3.0) BS13 FUB ? N/A A8J9H7 38552612
    57 8wa2:B (3.0) BS14 FUB ? N/A A8J9H7 38552612
    58 8wa2:B (3.0) BS15 FUB ? N/A A8J9H7 38552612
    59 8wa2:B (3.0) BS16 FUB ? N/A A8J9H7 38552612
    60 8wa2:B (3.0) BS17 FUB ? N/A A8J9H7 38552612
    61 8wa2:B (3.0) BS18 FUB ? N/A A8J9H7 38552612
    62 8wa2:B (3.0) BS19 FUB ? N/A A8J9H7 38552612
    63 8wa2:B (3.0) BS20 FUB ? N/A A8J9H7 38552612
    64 8wa2:B (3.0) BS21 FUB ? N/A A8J9H7 38552612
    65 8wa2:B (3.0) BS22 FUB ? N/A A8J9H7 38552612
    66 8wa2:B (3.0) BS23 FUB ? N/A A8J9H7 38552612
    67 8wa2:B (3.0) BS24 FUB ? N/A A8J9H7 38552612
    68 8wa2:B (3.0) BS25 FUB ? N/A A8J9H7 38552612
    69 8wa2:B (3.0) BS26 FUB ? N/A A8J9H7 38552612
    70 8wa2:B (3.0) BS27 FUB ? N/A A8J9H7 38552612
    71 8wa2:B (3.0) BS28 FUB ? N/A A8J9H7 38552612
    72 8wa2:B (3.0) BS29 FUB ? N/A A8J9H7 38552612
    73 8wa2:B (3.0) BS32 FUB ? N/A A8J9H7 38552612
    74 8wa2:B (3.0) BS33 FUB ? N/A A8J9H7 38552612
    75 8wa2:B (3.0) BS36 FUB ? N/A A8J9H7 38552612
    76 8wa2:B (3.0) BS37 FUB ? N/A A8J9H7 38552612
    77 8wa2:C (3.0) BS01 FUB ? N/A A8J9H7 38552612
    78 8wa2:C (3.0) BS02 FUB ? N/A A8J9H7 38552612
    79 8wa2:C (3.0) BS04 FUB ? N/A A8J9H7 38552612
    80 8wa2:C (3.0) BS06 FUB ? N/A A8J9H7 38552612
    81 8wa2:C (3.0) BS07 FUB ? N/A A8J9H7 38552612
    82 8wa2:C (3.0) BS08 FUB ? N/A A8J9H7 38552612
    83 8wa2:C (3.0) BS10 FUB ? N/A A8J9H7 38552612
    84 8wa2:C (3.0) BS11 FUB ? N/A A8J9H7 38552612
    85 8wa2:C (3.0) BS12 FUB ? N/A A8J9H7 38552612
    86 8wa2:C (3.0) BS13 FUB ? N/A A8J9H7 38552612
    87 8wa2:C (3.0) BS14 FUB ? N/A A8J9H7 38552612
    88 8wa2:C (3.0) BS16 FUB ? N/A A8J9H7 38552612
    89 8wa2:D (3.0) BS01 FUB ? N/A A8J9H7 38552612
    90 8wa2:D (3.0) BS02 FUB ? N/A A8J9H7 38552612
    91 8wa2:D (3.0) BS04 FUB ? N/A A8J9H7 38552612
    92 8wa2:D (3.0) BS05 FUB ? N/A A8J9H7 38552612
    93 8wa2:D (3.0) BS06 FUB ? N/A A8J9H7 38552612
    94 8wa2:D (3.0) BS07 FUB ? N/A A8J9H7 38552612
    95 8wa2:D (3.0) BS08 FUB ? N/A A8J9H7 38552612
    96 8wa2:D (3.0) BS09 FUB ? N/A A8J9H7 38552612
    97 8wa2:D (3.0) BS10 FUB ? N/A A8J9H7 38552612
    98 8wa2:D (3.0) BS11 FUB ? N/A A8J9H7 38552612
    99 8wa2:D (3.0) BS12 FUB ? N/A A8J9H7 38552612
    100 8wa2:D (3.0) BS13 FUB ? N/A A8J9H7 38552612
    101 8wa2:D (3.0) BS14 FUB ? N/A A8J9H7 38552612
    102 8wa2:D (3.0) BS15 FUB ? N/A A8J9H7 38552612
    103 8wa2:D (3.0) BS16 FUB ? N/A A8J9H7 38552612
    104 8wa2:D (3.0) BS18 FUB ? N/A A8J9H7 38552612
    105 8wa2:D (3.0) BS19 FUB ? N/A A8J9H7 38552612
    106 8wa2:D (3.0) BS21 FUB ? N/A A8J9H7 38552612
    107 8wa2:D (3.0) BS22 FUB ? N/A A8J9H7 38552612
    108 8wa2:D (3.0) BS23 FUB ? N/A A8J9H7 38552612
    109 8wa2:E (3.0) BS01 FUB ? N/A A8J9H7 38552612
    110 8wa2:E (3.0) BS02 FUB ? N/A A8J9H7 38552612
    111 8wa2:E (3.0) BS03 FUB ? N/A A8J9H7 38552612
    112 8wa2:E (3.0) BS04 FUB ? N/A A8J9H7 38552612
    113 8wa2:E (3.0) BS05 FUB ? N/A A8J9H7 38552612
    114 8wa2:E (3.0) BS06 FUB ? N/A A8J9H7 38552612
    115 8wa2:E (3.0) BS07 FUB ? N/A A8J9H7 38552612
    116 8wa2:E (3.0) BS08 FUB ? N/A A8J9H7 38552612
    117 8wa2:E (3.0) BS09 FUB ? N/A A8J9H7 38552612
    118 8wa2:E (3.0) BS10 FUB ? N/A A8J9H7 38552612
    119 8wa2:E (3.0) BS11 FUB ? N/A A8J9H7 38552612
    120 8wa2:E (3.0) BS12 FUB ? N/A A8J9H7 38552612
    121 8wa2:E (3.0) BS13 FUB ? N/A A8J9H7 38552612
    122 8wa2:E (3.0) BS15 FUB ? N/A A8J9H7 38552612
    123 8wa2:E (3.0) BS16 FUB ? N/A A8J9H7 38552612
    124 8wa2:E (3.0) BS17 FUB ? N/A A8J9H7 38552612
    125 8wa2:E (3.0) BS18 FUB ? N/A A8J9H7 38552612
    126 8wa2:E (3.0) BS20 FUB ? N/A A8J9H7 38552612
    127 8wa2:E (3.0) BS21 FUB ? N/A A8J9H7 38552612
    128 8wa2:E (3.0) BS23 FUB ? N/A A8J9H7 38552612
    129 8wa2:E (3.0) BS25 FUB ? N/A A8J9H7 38552612
    130 8wa2:E (3.0) BS28 FUB ? N/A A8J9H7 38552612
    131 8wa2:F (3.0) BS01 FUB ? N/A A8J9H7 38552612
    132 8wa2:F (3.0) BS02 FUB ? N/A A8J9H7 38552612
    133 8wa2:F (3.0) BS03 FUB ? N/A A8J9H7 38552612
    134 8wa2:F (3.0) BS04 FUB ? N/A A8J9H7 38552612
    135 8wa2:F (3.0) BS05 FUB ? N/A A8J9H7 38552612
    136 8wa2:F (3.0) BS06 FUB ? N/A A8J9H7 38552612
    137 8wa2:F (3.0) BS07 FUB ? N/A A8J9H7 38552612
    138 8wa2:F (3.0) BS08 FUB ? N/A A8J9H7 38552612
    139 8wa2:F (3.0) BS09 FUB ? N/A A8J9H7 38552612
    140 8wa2:F (3.0) BS10 FUB ? N/A A8J9H7 38552612
    141 8wa2:F (3.0) BS11 FUB ? N/A A8J9H7 38552612
    142 8wa2:F (3.0) BS12 FUB ? N/A A8J9H7 38552612
    143 8wa2:F (3.0) BS13 FUB ? N/A A8J9H7 38552612
    144 8wa2:F (3.0) BS14 FUB ? N/A A8J9H7 38552612
    145 8wa2:F (3.0) BS15 FUB ? N/A A8J9H7 38552612
    146 8wa2:F (3.0) BS16 FUB ? N/A A8J9H7 38552612
    147 8wa2:F (3.0) BS17 FUB ? N/A A8J9H7 38552612
    148 8wa2:F (3.0) BS18 FUB ? N/A A8J9H7 38552612
    149 8wa2:F (3.0) BS19 FUB ? N/A A8J9H7 38552612
    150 8wa2:F (3.0) BS21 FUB ? N/A A8J9H7 38552612
    151 8wa2:F (3.0) BS22 FUB ? N/A A8J9H7 38552612
    152 8wa2:F (3.0) BS25 FUB ? N/A A8J9H7 38552612
    153 8wa2:F (3.0) BS26 FUB ? N/A A8J9H7 38552612
    154 8wa2:F (3.0) BS28 FUB ? N/A A8J9H7 38552612
    155 8wa2:F (3.0) BS29 FUB ? N/A A8J9H7 38552612
    156 8wa2:G (3.0) BS01 FUB N/A N/A N/A 38552612
    157 8wa2:G (3.0) BS02 FUB N/A N/A N/A 38552612
    158 8wa2:G (3.0) BS04 FUB N/A N/A N/A 38552612
    159 8wa2:G (3.0) BS06 FUB N/A N/A N/A 38552612
    160 8wa2:G (3.0) BS07 FUB N/A N/A N/A 38552612
    161 8wa2:G (3.0) BS10 FUB N/A N/A N/A 38552612
    162 8wa2:G (3.0) BS13 FUB N/A N/A N/A 38552612
    163 8wa2:G (3.0) BS15 FUB N/A N/A N/A 38552612
    164 8wa2:G (3.0) BS17 FUB N/A N/A N/A 38552612
    165 8wa2:H (3.0) BS02 FUB N/A N/A N/A 38552612
    166 8wa2:H (3.0) BS04 FUB N/A N/A N/A 38552612
    167 8wa2:I (3.0) BS02 FUB N/A N/A N/A 38552612
    168 9b4h:A (3.1) BS01 FUB ? N/A A8J9H7 38552624
    169 9b4h:A (3.1) BS02 FUB ? N/A A8J9H7 38552624
    170 9b4h:A (3.1) BS03 FUB ? N/A A8J9H7 38552624
    171 9b4h:A (3.1) BS04 FUB ? N/A A8J9H7 38552624
    172 9b4h:A (3.1) BS05 FUB ? N/A A8J9H7 38552624
    173 9b4h:A (3.1) BS06 FUB ? N/A A8J9H7 38552624
    174 9b4h:A (3.1) BS07 FUB ? N/A A8J9H7 38552624
    175 9b4h:A (3.1) BS08 FUB ? N/A A8J9H7 38552624
    176 9b4h:A (3.1) BS09 FUB ? N/A A8J9H7 38552624
    177 9b4h:A (3.1) BS10 FUB ? N/A A8J9H7 38552624
    178 9b4h:A (3.1) BS11 FUB ? N/A A8J9H7 38552624
    179 9b4h:A (3.1) BS12 FUB ? N/A A8J9H7 38552624
    180 9b4h:A (3.1) BS13 FUB ? N/A A8J9H7 38552624
    181 9b4h:A (3.1) BS14 FUB ? N/A A8J9H7 38552624
    182 9b4h:A (3.1) BS15 FUB ? N/A A8J9H7 38552624
    183 9b4h:A (3.1) BS16 FUB ? N/A A8J9H7 38552624
    184 9b4h:A (3.1) BS17 FUB ? N/A A8J9H7 38552624
    185 9b4h:A (3.1) BS18 FUB ? N/A A8J9H7 38552624
    186 9b4h:A (3.1) BS19 FUB ? N/A A8J9H7 38552624
    187 9b4h:B (3.1) BS02 FUB ? N/A A8J9H7 38552624
    188 9b4h:B (3.1) BS03 FUB ? N/A A8J9H7 38552624
    189 9b4h:B (3.1) BS04 FUB ? N/A A8J9H7 38552624
    190 9b4h:B (3.1) BS05 FUB ? N/A A8J9H7 38552624
    191 9b4h:B (3.1) BS06 FUB ? N/A A8J9H7 38552624
    192 9b4h:B (3.1) BS07 FUB ? N/A A8J9H7 38552624
    193 9b4h:B (3.1) BS08 FUB ? N/A A8J9H7 38552624
    194 9b4h:B (3.1) BS09 FUB ? N/A A8J9H7 38552624
    195 9b4h:B (3.1) BS10 FUB ? N/A A8J9H7 38552624
    196 9b4h:B (3.1) BS11 FUB ? N/A A8J9H7 38552624
    197 9b4h:B (3.1) BS12 FUB ? N/A A8J9H7 38552624
    198 9b4h:B (3.1) BS13 FUB ? N/A A8J9H7 38552624
    199 9b4h:B (3.1) BS14 FUB ? N/A A8J9H7 38552624
    200 9b4h:B (3.1) BS15 FUB ? N/A A8J9H7 38552624
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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