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BioLiP Library
>protein
ILCNLFAIALGRYIQSRGKGPGLGLPELLATTSFGHLLAAGVVSGL

The query sequence (length=46) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7m75:K 47 47 1.0000 0.9787 0.9787 6.84e-25 4fe1:K, 1jb0:K, 7m76:K, 7m78:K, 3pcq:K, 6pfy:K, 6pfy:T, 6pfy:g, 6pgk:T, 6pgk:K, 6pgk:g, 5zf0:K1, 5zf0:K2, 5zf0:K3, 5zf0:K4, 5zf0:K6, 5zf0:K5
2 7fix:K1 79 58 1.0000 0.5823 0.7931 2.29e-21 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
3 6vpv:K 78 56 0.6522 0.3846 0.5357 2.55e-11 6vpv:k, 6vpv:9
4 6kmx:aK 46 45 0.6087 0.6087 0.6222 2.57e-11 6kmx:bK, 6kmx:cK
5 7y5e:KN 70 54 0.5870 0.3857 0.5000 2.52e-10 7y5e:K2, 7y7a:K7, 7y7a:Ko
6 4l6v:K 80 57 0.6522 0.3750 0.5263 3.85e-10 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
7 7y7b:K 78 56 0.5870 0.3462 0.4821 4.16e-09 7y8a:K
8 4kt0:K 53 45 0.5217 0.4528 0.5333 5.87e-08
9 8wm6:K 69 48 0.5217 0.3478 0.5000 1.23e-07 8wmj:K, 8wmv:K, 8wmw:K
10 6kif:K 78 56 0.5652 0.3333 0.4643 2.69e-07 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
11 8wey:K 63 50 0.5000 0.3651 0.4600 1.05e-06
12 8asp:k 77 56 0.5217 0.3117 0.4286 4.43e-05 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
13 6k61:k 78 56 0.5000 0.2949 0.4107 8.48e-05 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
14 5zgb:K 59 46 0.3696 0.2881 0.3696 3.02e-04 7blz:K, 6fos:K, 5zgh:K
15 6tcl:K 60 46 0.4565 0.3500 0.4565 4.10e-04 6tcl:KK
16 7s3d:K 75 53 0.5000 0.3067 0.4340 0.18 7s3d:T, 7s3d:k
17 7dr2:aK 69 51 0.3913 0.2609 0.3529 0.73 7dr0:K, 7dr2:cK
18 7coy:aK 33 43 0.3043 0.4242 0.3256 0.94 7coy:bK, 7coy:cK
19 6w4x:C 375 34 0.2826 0.0347 0.3824 1.9 7ai8:A, 7ai9:A, 2alx:A, 1av8:A, 1av8:B, 2av8:A, 2av8:B, 7bet:A, 1biq:A, 1biq:B, 5ci0:A, 5ci1:A, 5ci2:A, 5ci3:A, 5ci4:A, 5cns:E, 5cns:F, 5cns:G, 5cns:H, 5cnt:E, 5cnt:F, 5cnt:G, 5cnt:H, 5cnu:E, 5cnu:F, 5cnu:G, 5cnu:H, 5cnv:E, 5cnv:F, 5cnv:G, 5cnv:H, 4erm:E, 4erm:F, 4erm:G, 4erm:H, 4erp:E, 4erp:F, 4erp:G, 4erp:H, 1jpr:A, 1jpr:B, 1jqc:A, 1jqc:B, 1mrr:A, 1mrr:B, 1mxr:A, 1mxr:B, 1pfr:A, 1pfr:B, 1pim:A, 1pim:B, 1piu:A, 1piu:B, 1piy:A, 1piy:B, 1piz:A, 1piz:B, 1pj0:A, 1pj0:B, 1pj1:A, 1pj1:B, 1pm2:A, 1pm2:B, 1r65:A, 1r65:B, 1rib:A, 1rib:B, 1rnr:A, 1rnr:B, 1rsr:A, 1rsr:B, 1rsv:A, 1rsv:B, 3uus:E, 3uus:F, 3uus:G, 3uus:H, 6w4x:D, 1xik:A, 1xik:B, 2xof:A, 2xof:B, 1yfd:A, 1yfd:B
20 8fkp:NS 305 33 0.2609 0.0393 0.3636 2.3 8fkr:NS, 8fkt:NS, 8fkv:NS
21 8hs0:A 570 25 0.2609 0.0211 0.4800 4.6 8ikz:A, 5ze4:A
22 8bcv:K 88 29 0.2826 0.1477 0.4483 4.7 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
23 3ndb:B 420 17 0.2174 0.0238 0.5882 5.2 2v3c:C, 2v3c:D, 4xco:D
24 3a6z:C 616 27 0.2609 0.0195 0.4444 5.2 3a6z:A, 3a70:A, 3a70:C, 2z8x:A, 2z8z:A, 2zj6:A, 2zj7:A, 2zvd:A, 2zvd:C
25 8imu:A 523 25 0.2609 0.0229 0.4800 5.5 8imu:B
26 6he3:A 422 31 0.2826 0.0308 0.4194 5.9 6hdz:A, 6hdz:B, 6he1:A, 6he1:B, 6he3:B
27 8j7a:K 56 36 0.3043 0.2500 0.3889 5.9
28 6igz:K 80 20 0.2174 0.1250 0.5000 6.8
29 8ioc:R 272 13 0.1739 0.0294 0.6154 7.8
30 8e9h:G 782 39 0.3043 0.0179 0.3590 9.7 8e9g:G, 8e9i:G
31 7mq8:SH 368 28 0.2826 0.0353 0.4643 9.9 7mqa:SH

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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