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BioLiP Library
Download all results in tab-seperated text for 274 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 7r3k:B (2.52) BS21 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    202 7r3k:B (2.52) BS22 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    203 7r3k:B (2.52) BS23 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    204 7r3k:B (2.52) BS24 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    205 7r3k:B (2.52) BS25 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    206 7r3k:B (2.52) BS26 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    207 7r3k:B (2.52) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    208 7r3k:B (2.52) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    209 7r3k:B (2.52) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    210 7r3k:B (2.52) BS30 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    211 7r3k:B (2.52) BS31 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    212 7r3k:B (2.52) BS32 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    213 7r3k:B (2.52) BS33 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    214 7r3k:B (2.52) BS34 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    215 7r3k:B (2.52) BS35 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    216 7r3k:B (2.52) BS36 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    217 7r3k:B (2.52) BS37 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    218 7r3k:B (2.52) BS38 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    219 7r3k:B (2.52) BS39 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    220 7r3k:B (2.52) BS40 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    221 7r3k:B (2.52) BS41 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    222 7r3k:B (2.52) BS42 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    223 7r3k:B (2.52) BS43 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    224 7r3k:B (2.52) BS44 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    225 7r3k:B (2.52) BS45 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    226 7r3k:B (2.52) BS46 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    227 7r3k:B (2.52) BS47 PQN 1.97.1.12 GO:0000287 ... P09144 36979472
    228 7r3k:B (2.52) BS48 CA 1.97.1.12 GO:0000287 ... P09144 36979472
    229 7r3k:B (2.52) BS49 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    230 7r3k:B (2.52) BS50 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    231 7r3k:B (2.52) BS51 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    232 7r3k:C (2.52) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 36979472
    233 7r3k:C (2.52) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 36979472
    234 7r3k:F (2.52) BS01 CLA ? GO:0005515 ... P12356 36979472
    235 7r3k:F (2.52) BS02 CLA ? GO:0005515 ... P12356 36979472
    236 7r3k:F (2.52) BS03 CLA ? GO:0005515 ... P12356 36979472
    237 7r3k:F (2.52) BS04 CLA ? GO:0005515 ... P12356 36979472
    238 7r3k:F (2.52) BS05 CLA ? GO:0005515 ... P12356 36979472
    239 7r3k:F (2.52) BS06 CLA ? GO:0005515 ... P12356 36979472
    240 7r3k:F (2.52) BS07 RRX ? GO:0005515 ... P12356 36979472
    241 7r3k:F (2.52) BS08 CLA ? GO:0005515 ... P12356 36979472
    242 7r3k:F (2.52) BS09 ERG ? GO:0005515 ... P12356 36979472
    243 7r3k:G (2.52) BS01 CLA ? GO:0009507 ... P14224 36979472
    244 7r3k:G (2.52) BS02 CLA ? GO:0009507 ... P14224 36979472
    245 7r3k:G (2.52) BS03 CLA ? GO:0009507 ... P14224 36979472
    246 7r3k:G (2.52) BS04 CLA ? GO:0009507 ... P14224 36979472
    247 7r3k:I (2.52) BS01 CLA ? GO:0009522 ... A8IFG7 36979472
    248 7r3k:I (2.52) BS02 CLA ? GO:0009522 ... A8IFG7 36979472
    249 7r3k:J (2.52) BS01 CLA ? GO:0009507 ... P59777 36979472
    250 7r3k:J (2.52) BS02 CLA ? GO:0009507 ... P59777 36979472
    251 7r3k:J (2.52) BS03 CLA ? GO:0009507 ... P59777 36979472
    252 7r3k:J (2.52) BS04 CLA ? GO:0009507 ... P59777 36979472
    253 7r3k:J (2.52) BS05 C7Z ? GO:0009507 ... P59777 36979472
    254 7r3k:K (2.52) BS01 CLA ? GO:0009507 ... P14225 36979472
    255 7r3k:K (2.52) BS02 CLA ? GO:0009507 ... P14225 36979472
    256 7r3k:K (2.52) BS03 CLA ? GO:0009507 ... P14225 36979472
    257 7r3k:K (2.52) BS04 CLA ? GO:0009507 ... P14225 36979472
    258 7r3k:K (2.52) BS05 CLA ? GO:0009507 ... P14225 36979472
    259 7r3k:K (2.52) BS06 CLA ? GO:0009507 ... P14225 36979472
    260 7r3k:K (2.52) BS07 CLA ? GO:0009507 ... P14225 36979472
    261 7r3k:Z (2.52) BS01 CHL ? GO:0009416 ... Q05093 36979472
    262 7r3k:Z (2.52) BS02 CLA ? GO:0009416 ... Q05093 36979472
    263 7r3k:Z (2.52) BS03 CLA ? GO:0009416 ... Q05093 36979472
    264 7r3k:Z (2.52) BS04 CLA ? GO:0009416 ... Q05093 36979472
    265 7r3k:Z (2.52) BS05 CLA ? GO:0009416 ... Q05093 36979472
    266 7r3k:Z (2.52) BS06 CLA ? GO:0009416 ... Q05093 36979472
    267 7r3k:Z (2.52) BS07 CLA ? GO:0009416 ... Q05093 36979472
    268 7r3k:Z (2.52) BS08 CHL ? GO:0009416 ... Q05093 36979472
    269 7r3k:Z (2.52) BS09 CHL ? GO:0009416 ... Q05093 36979472
    270 7r3k:Z (2.52) BS10 CLA ? GO:0009416 ... Q05093 36979472
    271 7r3k:Z (2.52) BS11 CLA ? GO:0009416 ... Q05093 36979472
    272 7r3k:Z (2.52) BS12 CHL ? GO:0009416 ... Q05093 36979472
    273 7r3k:Z (2.52) BS13 CLA ? GO:0009416 ... Q05093 36979472
    274 7r3k:Z (2.52) BS14 CLA ? GO:0009416 ... Q05093 36979472
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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