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Structure of PDB 5wlc Chain L5

Receptor sequence
>5wlcL5 (length=213) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence]
DFEVVEEFTPVVLATPIPEEVQQAQTEIKLFNKWSFEEVEVKDASLVDYV
QVRQPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVR
IIKHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDV
SPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIK
KKDELERVAKSNR
3D structure
PDB5wlc The complete structure of the small-subunit processome.
ChainL5
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L5 H72 A78 K80 R81 K84 N95 M99 R102 N104 G105 K106 K109 R112 N169 R185 H60 A66 K68 R69 K72 N83 M87 R90 N92 G93 K94 K97 R100 N157 R173
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links

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