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I-TASSER I-TASSER-MTD C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign CR-I-TASSER GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

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GPCR-RD is a database for experimental restaints of GPCRs. Although no solved X-ray or NMR structure is available for most GPCR sequences, numerous experiments have been performed on GPCRs to identify the critical residues and motifs. Experimental restraints were systematically collected from the literature using an automated text mining algorithm combined with manual validation, with the purpose of assisting GPCR 3-D structure modeling and function annotation. The GPCR-RD data are useful for GPCR 3D structure modeling, such as the GPCR-I-TASSER algorithm. The flow chart below summarizes the procedure for the extraction of experimental data and spatial restraints from literature and other resources.

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11002 entries in GPCR-RD.
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GPCR-RD: GPCR experimental restaint database
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Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data
aa1r_human L190 aa1r_human L193 aa1r_human L194
aa1r_human L195 aa1r_human L198 aa1r_human L201
aa1r_human L236 aa1r_human L238 aa1r_human L240
aa1r_human L242 aa1r_human L245 aa1r_human L248
aa1r_human L250 aa1r_human L253 aa1r_human L258
aa1r_human L269 aa1r_human L276 aa1r_human M196
aa1r_human M283 aa1r_human F185 aa1r_human F186
aa1r_human F241 aa1r_human F243 aa1r_human F275
aa1r_human F290 aa1r_human P191 aa1r_human P192
aa1r_human P249 aa1r_human P285 aa1r_human S246
aa1r_human S281 aa1r_human T257 aa1r_human T270
aa1r_human T277 aa1r_human W188 aa1r_human W247
aa1r_human Y200 aa1r_human Y271 aa1r_human Y288
aa1r_human V187 aa1r_human V189 aa1r_human V197
aa1r_human V287 adrb2_mesau S220 drd1_human L274
oprm_human T210 lshr_rat A377 lshr_rat A408
lshr_rat A445 lshr_rat A446 lshr_rat A453
lshr_rat A487 lshr_rat A502 lshr_rat A542
lshr_rat A548 lshr_rat A587 lshr_rat A593
lshr_rat A596 lshr_rat A597 lshr_rat A622
lshr_rat N374 lshr_rat N381 lshr_rat N404
lshr_rat N539 lshr_rat N619 lshr_rat N623
lshr_rat D582 lshr_rat C403 lshr_rat C411
lshr_rat C547 lshr_rat C549 lshr_rat C585
lshr_rat C621 lshr_rat E455 lshr_rat G380
lshr_rat G413 lshr_rat G444 lshr_rat G447
lshr_rat G493 lshr_rat G494 lshr_rat G508
lshr_rat I370 lshr_rat I373 lshr_rat I375
lshr_rat I378 lshr_rat I464 lshr_rat I488
lshr_rat I490 lshr_rat I501 lshr_rat I509
lshr_rat I532 lshr_rat I535 lshr_rat I537


Reference:

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