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GLASS

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Go to the GPCR, ligand, or experimental data tables.
Go to the experimental data table for text mining information in PubMed ID column.
Go to the GPCR page and check other ligands which interact with it.
Go to the ligand page and check other GPCRs which it interacts with.
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GPCR

Name	Platelet-activating factor receptor
Species	Homo sapiens (Human)
Gene	PTAFR
Synonym	PAFr PAF-R PAF receptor AGEPC receptor
Disease	Nerve injury Ocular allergy Pain Unspecified Psoriasis Septic shock Solid tumours Stroke Thrombocytopenia Thromboembolism Inflammatory disease Inflammatory bowel disease Conjunctivitis Cerebral infarction Cardiac arrhythmias Allergy Asthma Brain ischaemia [ Show all ]
Length	342
Amino acid sequence	MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN
UniProt	P25105
Protein Data Bank	5zkq, 5zkp
GPCR-HGmod model	P25105
3D structure model	This structure is from PDB ID 5zkq.
BioLiP	BL0417415, BL0417417,BL0417419, BL0417416,BL0417418, BL0417414
Therapeutic Target Database	T87023
ChEMBL	CHEMBL250
IUPHAR	334
DrugBank	BE0005561

Ligand

Name	CHEMBL296600
Molecular formula	C26H34N2O2
IUPAC name	(2E,4E)-5-(4-methoxyphenyl)-N-[(2R)-5-pyridin-3-ylpentan-2-yl]nona-2,4-dienamide
Molecular weight	406.57
Hydrogen bond acceptor	3
Hydrogen bond donor	1
XlogP	6.4
Synonyms	BDBM50018393 SCHEMBL9519947 5-(4-Methoxy-phenyl)-nona-2,4-dienoic acid (1-methyl-4-pyridin-3-yl-butyl)-amide
Inchi Key	BXOSIDBTKAUHJN-CHOYAOEFSA-N
Inchi ID	InChI=1S/C26H34N2O2/c1-4-5-12-23(24-15-17-25(30-3)18-16-24)13-7-14-26(29)28-21(2)9-6-10-22-11-8-19-27-20-22/h7-8,11,13-21H,4-6,9-10,12H2,1-3H3,(H,28,29)/b14-7+,23-13+/t21-/m1/s1
PubChem CID	14347409
ChEMBL	CHEMBL296600
IUPHAR	N/A
BindingDB	50018393
DrugBank	N/A
Structure SDF download
Lipinski's druglikeness	This ligand has a partition coefficient log P greater than 5.

Experimental Data

Parameter	Value	Reference	Database source
IC50	14.0 nM	PMID2754709	BindingDB,ChEMBL

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