Zhang Lab

National University of Singapore

Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

GLASS

You can:

Go to the GPCR, ligand, or experimental data tables.
Go to the experimental data table for text mining information in PubMed ID column.
Go to the GPCR page and check other ligands which interact with it.
Go to the ligand page and check other GPCRs which it interacts with.
Go back to previous page.

GPCR

Name	Rhodopsin
Species	Homo sapiens (Human)
Gene	RHO
Synonym	Opsin-2 Rhodopsin
Disease	N/A
Length	348
Amino acid sequence	MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
UniProt	P08100
Protein Data Bank	N/A
GPCR-HGmod model	P08100
3D structure model	This predicted structure model is from GPCR-EXP P08100.
BioLiP	N/A
Therapeutic Target Database	N/A
ChEMBL	N/A
IUPHAR	N/A
DrugBank	BE0001200

Ligand

Name	hexadecanal
Molecular formula	C16H32O
IUPAC name	hexadecanal
Molecular weight	240.431
Hydrogen bond acceptor	1
Hydrogen bond donor	0
XlogP	7.1
Synonyms	AC1L1AGZ CHEMBL1235338 EINECS 211-111-0 LS-74817 palmitoyl aldehyde UNII-WQD27655QE AI3-24252 D06PXR N-hexadecanal QSPL 064 1-hexadecanal 629-80-1 C00517 DB03381 KS-000016GB Palmitaldehyde, 16-Hexadecanal TRA0026585 AC1Q6QL1 CS-W004305 FT-0626966 MCULE-1337115097 Palmityl Aldehyde WQD27655QE AKOS005145523 DB-073236 Hexadecanaldehyde NIOYUNMRJMEDGI-UHFFFAOYSA-N RB3019 16-Hexadecanal 6369AF CHEBI:17600 DTXSID5042039 LMFA06000088 Palmitic aldehyde TX-010227 ACMC-209nbe CTK2F4087 GTPL6627 MolPort-001-784-298 PLY ZINC8216082 16:0 aldehyde, hexadecanal, methylene chloride solution ANW-34488 I14-55840 palmitaldehyde SCHEMBL4481 [ Show all ]
Inchi Key	NIOYUNMRJMEDGI-UHFFFAOYSA-N
Inchi ID	InChI=1S/C16H32O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17/h16H,2-15H2,1H3
PubChem CID	984
ChEMBL	N/A
IUPHAR	N/A
BindingDB	N/A
DrugBank	DB03381
Structure SDF download
Lipinski's druglikeness	This ligand has a partition coefficient log P greater than 5.

Experimental Data

Parameter	Value	Reference	Database source
	N/A	N/A	DrugBank

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417