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Structure of PDB 7z11 Chain D

Receptor sequence >7z11D (length=734) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] KFKLPAEFITRPHPSKDHGKETCTAYIHPNVLSSLEINPGSFCTVGKIGE NGILVIARAGDEEVHPVNVITLSTTIRSVGNLILGDRLELKKAQVQPPYA TKVTVGSLQGYNILECMEEKVIQKLLDDSGVIMPGMIFQNLKTKAGDESI DVVITDASDDNLFYLSPPFIFRKGSTHITFSKETQANRKYNLPEPLSYAA VGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLL RVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDE IDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVD PALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIA SKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMV DIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLG ISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESER AIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDG VEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKC TKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE LRHFEKAFKGIARGITPEMLSYYEEFALRSGSSS

3D structure PDB 7z11 Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1. Chain D Resolution 3.2 Å 3D structure [Spin on] [Spin off] [Reset orientation] [High quality] [Low quality] [White background] [Black background] [Download] [Download structure with residue number starting from 1]

Enzymatic activity Enzyme Commision number 3.6.4.10: non-chaperonin molecular chaperone ATPase.

Interaction with ligand Site # Ligand Ligand chain Binding residues on receptor (original residue number in PDB) Binding residues on receptor (residue number reindexed from 1) Binding affinity BS01 peptide D K318 L320 V591 K272 L274 V545 BS02 AGS D R401 R404 R355 R358 BS03 AGS D T290 G291 K292 T293 D345 T458 T244 G245 K246 T247 D299 T412 BS04 AGS D G519 P559 G560 C561 K563 T564 L565 G721 A722 G473 P513 G514 C515 K517 T518 L519 G675 A676

Gene Ontology Molecular Function GO:0005515 protein binding GO:0005524 ATP binding GO:0016787 hydrolase activity GO:0016887 ATP hydrolysis activity

	Biological Process
GO:0009410	response to xenobiotic stimulus
GO:0034214	protein hexamerization
GO:0042254	ribosome biogenesis
GO:0042273	ribosomal large subunit biogenesis

	Cellular Component
GO:0005737	cytoplasm
GO:0030687	preribosome, large subunit precursor

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