BioLiP

Structure of PDB 5br6 Chain C

Receptor sequence

>5br6C (length=326) Species: 11320 (Influenza A virus) [Search protein sequence]

DKICIGYHANNSTTQVDTLLEKNVTVTHSVELLENQKEKRFCKIMNKAPL
DLKDCTIEGWILGNPKCDLLLGDQSWSYIVERPNAQNGICYPGVLNELEE
LKAFIGSGERVERFEMFPKSTWAGVDTSRGVTNACPSYTIDSSFYRNLVW
IVKTDSATYPVIKGTYNNTGTQPILYFWGVHHPLDTTVQDNLYGSGDKYV
RMGTESMNFAKSPEIAARPAVNGQRSRIDYYWSVLRPGETLNVESNGNLI
APWYAYKFVSTNKKGAVFKSDLPIENCDATCQTITGVLRTNKTFQNVSPL
WIGECPKYVKSESLRLATGLRNVPQI

3D structure

PDB

5br6 Structural and Functional Studies of Influenza Virus A/H6 Hemagglutinin.

Chain

Resolution

2.43 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	SIA	C	Y91 V131 T132 N133 W150 Q224 S226	Y91 V131 T132 N133 W150 Q224 S226

Gene Ontology

	Molecular Function
GO:0046789	host cell surface receptor binding

	Biological Process
GO:0019062	virion attachment to host cell
GO:0019064	fusion of virus membrane with host plasma membrane
GO:0039654	fusion of virus membrane with host endosome membrane
GO:0046718	symbiont entry into host cell
GO:0075512	clathrin-dependent endocytosis of virus by host cell

	Cellular Component
GO:0005886	plasma membrane
GO:0016020	membrane
GO:0016324	apical plasma membrane
GO:0019031	viral envelope
GO:0020002	host cell plasma membrane

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Molecular Function

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Biological Process

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Cellular Component

PDB	RCSB:5br6, PDBe:5br6, PDBj:5br6
PDBsum	5br6
PubMed	26226046
UniProt	A0A0M3KL64