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BioLiP

Structure of PDB 3qmd Chain A

Receptor sequence
>3qmdA (length=53) Species: 9606 (Homo sapiens) [Search protein sequence]
SARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARE
SYK
3D structure
PDB3qmd The structural basis for selective binding of non-methylated CpG islands by the CFP1 CXXC domain.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A K202 R204 K34 R36
BS02 dna A R171 R204 Q205 K206 R210 R217 R3 R36 Q37 K38 R42 R49
BS03 ZN A C173 C176 C179 C212 C5 C8 C11 C44
BS04 ZN A C185 C188 C191 C207 C17 C20 C23 C39
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008270 zinc ion binding

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Molecular Function
External links
PDB RCSB:3qmd, PDBe:3qmd, PDBj:3qmd
PDBsum3qmd
PubMed21407193
UniProtQ9P0U4|CXXC1_HUMAN CXXC-type zinc finger protein 1 (Gene Name=CXXC1)

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