Structure of PDB 7dgr Chain 9

Receptor sequence

>7dgr9 (length=207) Species: 9913 (Bos taurus) [Search protein sequence]

VHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQ
NGWLPISAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTP
CMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIN
DNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPK
GPGFGVQ

3D structure

PDB

7dgr A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.

Chain

Resolution

4.6 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

7.1.1.2: NADH:ubiquinone reductase (H(+)-translocating).

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	9	N59 R62 K68 N69 Y70 P71 E72 G73 H74 R88	N20 R23 K29 N30 Y31 P32 E33 G34 H35 R49
BS02	FES	9	C135 T137 C140 C176 L177 A179 C180	C96 T98 C101 C137 L138 A140 C141

Gene Ontology

	Molecular Function
GO:0016491	oxidoreductase activity

View graph for
Molecular Function

External links

PDB	RCSB:7dgr, PDBe:7dgr, PDBj:7dgr
PDBsum	7dgr
PubMed	34913730
UniProt	P04394\|NDUV2_BOVIN NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (Gene Name=NDUFV2)

[Back to BioLiP]

zhanglab

zhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417