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Structure of PDB 1c8t Chain B Binding Site BS05

Receptor Information
>1c8t Chain B (length=167) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRL
YEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQ
WTKDTTGTNLFLVAAHQIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLS
QDDINGIQSLYGPPPDP
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1c8t Chain B Residue 264 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1c8t Expression, characterization and structure determination of an active site mutant (Glu202-Gln) of mini-stromelysin-1.
Resolution2.6 Å
Binding residue
(original residue number in PDB)
D107 D182 E184 Q185
Binding residue
(residue number reindexed from 1)
D22 D97 E99 Q100
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) H201 Q202 H205 H211
Catalytic site (residue number reindexed from 1) H116 Q117 H120 H126
Enzyme Commision number 3.4.24.17: stromelysin 1.
Gene Ontology
Molecular Function
GO:0004222 metalloendopeptidase activity
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0031012 extracellular matrix

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:1c8t, PDBe:1c8t, PDBj:1c8t
PDBsum1c8t
PubMed10877850
UniProtP08254|MMP3_HUMAN Stromelysin-1 (Gene Name=MMP3)

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