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Structure of PDB 6imn Chain B Binding Site BS02

Receptor Information
>6imn Chain B (length=408) Species: 10497 (African swine fever virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LNQFPGQYSNNIFCFPPIESETKSGKKASWIICVQVVQHNTIIPITDEMF
STDVKDAVAEIFTKFFVEEGAVRISKMTRVTEGKNLGKKNATTVVHQAFK
DALSKYNRHARQKRGGMIPPMLVKYFNIIPKTFFEEETDPIVQRKRNGVR
AVACQQGDGCILLYSRTEKEFLGLDNIKKELKQLYLFIDVRVYLDGELYL
HRKPLQWIAGQANAKTDSSELHFYVFDCFWSDQLQMPSNKRQQLLTNIFK
QKEDLTFIHQVENFSVKNVDEALRLKAQFIKEGYEGAIVRNANGPYEPGY
NNYHSAHLAKLKPLLDAEFILVDYTQGKKGKDLGAILWVCELPNKKRFVV
TPKHLTYADRYALFQKLTPALFKKHLYGKELTVEYAELSPKTGIPLQARA
VGFREPIN
Ligand information
Receptor-Ligand Complex Structure
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PDB6imn Structure of the error-prone DNA ligase of African swine fever virus identifies critical active site residues.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
S25 G71 A72 R74 K85 N86 Q98 S105 R109 R112 S171 R172 T173 K175 L211 N219 K359 T362 Y363 Q403 R405
Binding residue
(residue number reindexed from 1)
S24 G70 A71 R73 K84 N85 Q97 S104 R108 R111 S165 R166 T167 K169 L205 N213 K353 T356 Y357 Q397 R399
Enzymatic activity
Enzyme Commision number 6.5.1.1: DNA ligase (ATP).
Gene Ontology
Molecular Function
GO:0003909 DNA ligase activity
GO:0003910 DNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0051301 cell division
Cellular Component
GO:0044423 virion component

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6imn, PDBe:6imn, PDBj:6imn
PDBsum6imn
PubMed30674878
UniProtP35970|DNLI_ASFB7 DNA ligase (Gene Name=LIG)

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