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BioLiP

Structure of PDB 2d3s Chain B Binding Site BS02

Receptor Information
>2d3s Chain B (length=237) Species: 3891 (Psophocarpus tetragonolobus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRAL
YAKPVQVWDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQT
GEGGGYFGIYNPLSPYPFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTV
PFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPE
SVNVGFSAATGDPSGKQRNATETHDILSWSFSASLPG
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain2d3s Chain B Residue 508 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2d3s Structural basis for the specificity of basic winged bean lectin for the Tn-antigen: a crystallographic, thermodynamic and modelling study
Resolution2.35 Å
Binding residue
(original residue number in PDB)		E122 D124 D131 H136
Binding residue
(residue number reindexed from 1)		E122 D124 D131 H136
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:2d3s, PDBe:2d3s, PDBj:2d3s
PDBsum2d3s
PubMed16310781
UniProtO24313|LEC1_PSOTE Basic agglutinin (Gene Name=WBAI)

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