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Structure of PDB 8wq4 Chain S27A Binding Site BS01

Receptor Information >8wq4 Chain S27A (length=54) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] QSKAVVRTYYEVEQDSIKLKNKKCPRCGSIMAHHMKPLERWACGKCGYTE FIGK

Ligand information >8wq4 Chain A16S (length=1325) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] auuccgguugauccugccggacccgaccgcuaucgggguagggauaagcc augggagucuuacacucccggguaagggaguguggcggacggcugaguaa cacguggcuaaccuacccucgggacggggauaaccccgggaaacugggga uaauccccgauagggaaggaguccuggaaugguuccuucccuaaagggcu auagguauuucccguuuguagccgcccgaggauggggcuacggcccauca ggcugucggugggguaaaggcccaccgaaccuauaacggguaggggccgu ggaagcgggagccuccaguugggcacugagacaagggcccaggcccuacg gggcgcaccaggcgcgaaacguccccaaugcgcgaaagcgugagggcgcu accccgagugccuccgcaggaggcuuuuccccgcucuaaaaaggcggggg aauaagcggggggcaagucuggugucagccgccgcgguaauaccagcucc gcgaguggucggggugauuacugggccuaaagcgccuguagccggcccac caagucgccccuuaaaguccccggcucaaccggggaacugggggcgauac uggugggcuagggggcgggagaggcgggggguacucccggaguaggggcg aaauccuuagauaccgggaggaccaccaguggcggaagcgccccgcuaga acgcgcccgacggugagaggcgaaagccgggggucccggcuguaaacgau gcgggcuaggugucgaguaggcuuagagccuacucggugccgcagggaag ccguuaagcccgccgccuggggaguacggucgcaagacugaaacuuaaag gaauuggcgggggagcaccacaagggguggaaccugcggcucaauuggag ucaacgccuggaaucuuaccggggagaccgcaguaugacggccaggcuaa cgaccuugccugacucgcggagaggaggugcauggccgucgccagcucgu guugugaaauguccgguuaaguccggcaacgagcgagacccccaccccua guugguauucuggacuccgguccagaaccacacuagggggacugccggcg uaagccggaggaaggagggggccacggcaggucagcaugccccgaaaccg ggccgcacgcggguuacaauggcagggacaacgggaugcuaccucgaaag ggggagccaauccuuaaacccugccgcaguugggaucgagggcugaaacc cgcccucgugaacgaggaaucccuaguaaccgcgggucaacaacccgcgg ugaauacgucccugcuccuugcaca ...<<<<<...((((>>>>>.<<<<<<<<......<<<.<<......<<< .<<<...<...<.<<<<<........>>>>>.>.>.......<<..<... ..<<<<<<<..<<...<<<<<<<.<<<<<....<<<<........>>>>. ....>>>>>....<<.<<<.<<<.......>>>>>.>>.>......<<<< <<.<...........>.>>>>>>.>>>>>>>..>>>>>>>>>.<<<.... <<....<<<<<<<.......>>>>>>>..>>......>>>....<<<<<< ....>>>>...>>..>>>.<<<<<............>>>>>.<<<<<..> >>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>> ..>>>....<<<<<.....>>>>>...<<<<<<<.........>>>>>>> .....<<<<<((......<<<<.....<<..))>>.......>>>>.>>> >>...>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<< <.<<..<<<<<......<<<<<<<.....>>>>>>>....>>>>>....> >>>>>>>>...<<<<<<.....<<<<<<<<<..<<<<<<<....<<.... ....>>.......>>>>>>>..>>.......<<....>>.>>>>>>>... .>>>.>>>...>>>...>>>>....<<<<<.....>>>>>.......... <<<<<<..<<<.<<<<<<<<<<.....>>>>>>>>>>.>>>...<<..)) >>.....>>>>>>.>>>..<<.....<<<<<....>>>>>...>>...)) ))..........<<<<<..<<.<<<<<...<<<<<<<.<<......<... .......>..........<<<..........<........<<.<<<.... ...>>>.>>.....>........<<.<<....<<<<<<<.....<<<<<. <<......>>..<<<<......>>>>...>>>>>....<<<<<.<<<<.< <.........<<<<<....>>>>>........>>.>>>>.....<<<<<. ...>>>>>........>>>>>.....>>.>>>...>>..>>>>.....>> >...>>..>>>>>>>.....<<<<<<<......<<..<<..<<<...... >>>..>>....>>.....>>>>>>>.............<<<<<....... .>>>>>.............>>>>>....<<<<<<<<.......>>>>>>> >......>>...>>>>>........

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 8wq4 Structural basis of translation inhibition by a valine tRNA-derived fragment Resolution 4.53 Å Binding residue (original residue number in PDB) K14 A15 V16 R18 Y21 E22 V23 E24 Q25 D26 K29 K31 N32 H44 M46 Binding residue (residue number reindexed from 1) K3 A4 V5 R7 Y10 E11 V12 E13 Q14 D15 K18 K20 N21 H33 M35

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome

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