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Structure of PDB 8wq2 Chain S24E Binding Site BS01

Receptor Information >8wq2 Chain S24E (length=96) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] VSDKVEGIVERDIQNNVANRRELYIKLFHIGSGTPSRKELVKAIASTFST AEDLVVVKKVFTNYGSGISYARVNVYKDKDSLQKLEPQYLIGRDTG

Ligand information >8wq2 Chain A16S (length=1328) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] auuccgguugauccugccggacccgaccgcuaucgggguagggauaagcc augggagucuuacacucccggguaagggaguguggcggacggcugaguaa cacguggcuaaccuacccucgggacggggauaaccccgggaaacugggga uaauccccgauagggaaggaguccuggaaugguuccuucccuaaagggcu auaggcuauuucccguuuguagccgcccgaggauggggcuacggcccauc aggcugucggugggguaaaggcccaccgaaccuauaacggguaggggccg uggaagcgggagccuccaguugggcacugagacaagggcccaggcccuac ggggcgcaccaggcgcgaaacguccccaaugcgcgaaagcgugagggcgc uaccccgagugccuccgcaggaggcuuuuccccgcucuaaaaaggcgggg gaauaagcggggggcaagucuggugucagccgccgcgguaauaccagcuc cgcgaguggucggggugauuacugggccuaaagcgccuguagccggccca ccaagucgccccuuaaaguccccggcucaaccggggaacugggggcgaua cuggugggcuagggggcgggagaggcgggggguacucccggaguaggggc gaaauccuuagauaccgggaggaccaccaguggcggaagcgccccgcuag aacgcgcccgacggugagaggcgaaagccgggggucccggcuguaaacga ugcgggcuaggugucgaguaggcuuagagccuacucggugccgcagggaa gccguuaagcccgccgccuggggaguacggucgcaagacugaaacuuaaa ggaauuggcgggggagcaccacaagggguggaaccugcggcucaauugga gucaacgccuggaaucuuaccgggggagaccgcaguaugacggccaggcu aacgaccuugccugacucgcggagaggaggugcauggccgucgccagcuc guguugugaaauguccgguuaaguccggcaacgagcgagacccccacccc uaguugguauucuggacuccgguccagaaccacacuagggggacugccgg cguaagccggaggaaggagggggccacggcaggucagcaugccccgaaac ccgggccgcacgcggguuacaauggcagggacaacgggaugcuaccucga aagggggagccaauccuuaaacccugccgcaguugggaucgagggcugaa acccgcccucgugaacgaggaaucccuaguaaccgcgggucaacaacccg cggugaauacgucccugcuccuugcaca ...<<<<..[..(((.>>>>.<<<<<<<.......<<<.<<......<<< .<<<..<<<..<<<<<<<<......>>>>>>>>>>>......<<..<... ..<<<<<<<..<<...<<<<<<..<<<<<....<<<<........>>>>. ....>>>>>...<<<<<<<...<<......>>..>>>>>>>.....<<<< <<................>>>>>>..>>>>>>..>>>>>>>>>.<<<... .<<...<<<<<<<.........>>>>>>>.>>......>>>..<<<<<<< <....>>>>...>>>>>>>.<<<<<............>>>>>.<<<<... .>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..> >..>>>....<<<<<.....>>>>>...<<<<<<<.........>>>>>> >.....<<<<<((......<<<<.....<<..))>>.......>>>>.>> >>>....>>>>>>>..........<<<((.....<<<<...<<<.<<<<< <<.<<..<<<<<......<<<<<<<.....>>>>>>>....>>>>>.... >>>>>>>>>...<<<<<<.....<<<<<<<<<<.<<<<<<.....<<... .....>>........>>>>>>.>>>.......<<....>>.>>>>>>>.. ..>>>.>>>...>>>...>>>>....<<<<<<...>>>>>>......... .<<<<<<..<<<.<<<<<<<<<<.....>>>>>>>>>>.>>>...<<..) )>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..) ))..]....<..<<<<<<...<.<<<<<...<<<<<<<<<<......<<. .......>>..........<<<<......<<..........<.<.<<<.. .....>>>.>.>........>>...<<.<<...<<<<<<<<.....<<<< <<<<<....>>>..<<<<......>>>>..>>>>>>....<<<<<.<<<< <<...<....<..<<<<....>>>>.>.....>..>>>>>>.....<<<< <....>>>>>........>>>>>.....>>.>>>...>>>.>>>>..... >>>>...>>.>>>>>>>>.....<<<<<<<......<<..<<..<<<... ...>>>..>>....>>.....>>>>>>>......<....<<<<<<<.... ....>>>>>>>....>......>>>>>....<<<<<<<<.......>>>> >>>>......>....>>>>>>.>.....

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 8wq2 Structural basis of translation inhibition by a valine tRNA-derived fragment Resolution 4.1 Å Binding residue (original residue number in PDB) G39 S40 G41 T42 P43 S44 R45 K67 V68 F69 N71 Y72 P95 Y97 R101 Binding residue (residue number reindexed from 1) G31 S32 G33 T34 P35 S36 R37 K59 V60 F61 N63 Y64 P87 Y89 R93

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome

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