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Structure of PDB 8wu1 Chain R Binding Site BS01

Receptor Information
>8wu1 Chain R (length=280) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGS
LAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLF
LTAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCC
SDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWKAHSHAVRMIQDIRL
AKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNST
VNPIIYALRSKDLRHAFESCTTASSSLAKD
Ligand information
Ligand IDKCA
InChIInChI=1S/C22H24FN3O3/c1-22(2,3)19(21(28)29-4)24-20(27)18-16-7-5-6-8-17(16)26(25-18)13-14-9-11-15(23)12-10-14/h5-12,19H,13H2,1-4H3,(H,24,27)/t19-/m1/s1
InChIKeyRFCDVEHNYDVCMU-LJQANCHMSA-N
SMILES
SoftwareSMILES
CACTVS 3.385COC(=O)[CH](NC(=O)c1nn(Cc2ccc(F)cc2)c3ccccc13)C(C)(C)C
CACTVS 3.385COC(=O)[C@@H](NC(=O)c1nn(Cc2ccc(F)cc2)c3ccccc13)C(C)(C)C
OpenEye OEToolkits 2.0.6CC(C)(C)C(C(=O)OC)NC(=O)c1c2ccccc2n(n1)Cc3ccc(cc3)F
OpenEye OEToolkits 2.0.6CC(C)(C)[C@@H](C(=O)OC)NC(=O)c1c2ccccc2n(n1)Cc3ccc(cc3)F
ACDLabs 12.01N(C(C(OC)=O)C(C)(C)C)C(c2nn(Cc1ccc(cc1)F)c3c2cccc3)=O
FormulaC22 H24 F N3 O3
Namemethyl N-{1-[(4-fluorophenyl)methyl]-1H-indazole-3-carbonyl}-3-methyl-L-valinate
ChEMBL
DrugBank
ZINCZINC000299817287
PDB chain8wu1 Chain R Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8wu1 Cryo-EM structure of CB1-beta-arrestin1 complex
Resolution3.2 Å
Binding residue
(original residue number in PDB)
F170 F174 L193 V196 T197 F200 F268 Y275 L276 W279 F379 S383
Binding residue
(residue number reindexed from 1)
F62 F66 L85 V88 T89 F92 F154 Y161 L162 W165 F238 S242
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004930 G protein-coupled receptor activity
GO:0004949 cannabinoid receptor activity
Biological Process
GO:0007186 G protein-coupled receptor signaling pathway
Cellular Component
GO:0016020 membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8wu1, PDBe:8wu1, PDBj:8wu1
PDBsum8wu1
PubMed
UniProtP21554|CNR1_HUMAN Cannabinoid receptor 1 (Gene Name=CNR1);
P30518|V2R_HUMAN Vasopressin V2 receptor (Gene Name=AVPR2)

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