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BioLiP

Structure of PDB 5e6i Chain I Binding Site BS01

Receptor Information
>5e6i Chain I (length=261) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAATLRCWA
LSFYPAEITLTWQRDDTELVETRPAGDGTFQKWAAVVVGQEQRYTCHVQH
EGLPKPLTLRW
Ligand information
>5e6i Chain K (length=9) Species: 947055 (Influenza A virus (A/Boston/2747243M/2009(H1N1))) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GILGFVFTL
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5e6i Crystal structure of TCR PF8 in complex with flu MP(58-66) epitope presented by HLA-A2
Resolution4.0 Å
Binding residue
(original residue number in PDB)		M5 Y7 K66 H70 T73 D77 R97 Y99 H114 Y116 W147 L156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		M5 Y7 K66 H70 T73 D77 R97 Y99 H114 Y116 W147 L156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5e6i, PDBe:5e6i, PDBj:5e6i
PDBsum5e6i
PubMed
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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