Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

Structure of PDB 7skm Chain D Binding Site BS01

Receptor Information
>7skm Chain D (length=37) Species: 7137 (Galleria mellonella) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IVLICNGGHEYYECGGACDNVCADLHIQNKTNCPIIN
Ligand information
>7skm Chain F (length=29) Species: 7137 (Galleria mellonella) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
IRCNDKCYCEDGYARDVNGKCIPIKDCPK
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7skm Structural evidence for standard-mechanism inhibition in metallopeptidases from a complex poised to resynthesize a peptide bond.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
I20 L22 C24 H28 E29 Y30 Y31 E32 C33 G34 G35 A36 C37 D38 N39 C41 K49 N56
Binding residue
(residue number reindexed from 1)
I1 L3 C5 H9 E10 Y11 Y12 E13 C14 G15 G16 A17 C18 D19 N20 C22 K30 N37
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:7skm, PDBe:7skm, PDBj:7skm
PDBsum7skm
PubMed
UniProtP82176|IMPI_GALME Inducible metalloproteinase inhibitor protein (Gene Name=IMPI)

[Back to BioLiP]

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417